RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 NR1I3Q14994 352 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 PPP2R5BQ15173 497 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 LONRF3Q496Y0 759 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 TAF7LQ5H9L4 462 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 CYB5R4Q7L1T6 521 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 FOXP4Q8IVH2 680 aaPredicted RBP10.4□□□□□ -0.74
SNF8-210ENST00000511214 TMTC2Q8N394 836 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 CEP112Q8N8E3 955 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 ZBTB38Q8NAP3 1195 aaPredicted RBP10.4□□□□□ -0.74
SNF8-210ENST00000511214 LRRN4CLQ8ND94 238 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 SMARCE1Q969G3 411 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 CTAGE1Q96RT6 745 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 KRT23Q9C075 422 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 LY9Q9HBG7 655 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 RAI14Q9P0K7 980 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 FBXO2Q9UK22 296 aaPredicted RBP10.4□□□□□ -0.74
SNF8-210ENST00000511214 RIPOR2Q9Y4F9 1068 aa10.4□□□□□ -0.74
SNF8-210ENST00000511214 SRPRBQ9Y5M8 271 aaKnown RBP10.4□□□□□ -0.74
SNF8-210ENST00000511214 UBN2Q6ZU65 1347 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 PATL2C9JE40 543 aaKnown RBP10.39□□□□□ -0.75
SNF8-210ENST00000511214 TMEM232C9JQI7 657 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 AKR1B15C9JRZ8 316 aaPredicted RBP10.39□□□□□ -0.75
SNF8-210ENST00000511214 CDC27P30260 824 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 SCARF1Q14162 830 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 HSP90AB3PQ58FF7 597 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 TRIM22Q8IYM9 498 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 STK11IPQ8N1F8 1099 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 EXOC4Q96A65 974 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 AK7Q96M32 723 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
SNF8-210ENST00000511214 NFE2L3Q9Y4A8 694 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 SLC12A7Q9Y666 1083 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 ECM29Q5VYK3 1845 aa10.39□□□□□ -0.75
SNF8-210ENST00000511214 COL22A1Q8NFW1 1626 aaPredicted RBP10.39□□□□□ -0.75
SNF8-210ENST00000511214 ITIH6Q6UXX5 1313 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 NPHP1O15259 732 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 FANCGO15287 622 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 RANBP6O60518 1105 aaKnown RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 PPFIA3O75145 1194 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 DEXIO95424 95 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 GNAT2P19087 354 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 CDK11BP21127 795 aaKnown RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 BMP6P22004 513 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 MCAMP43121 646 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 USP5P45974 858 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 PDE4BQ07343 736 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 SART3Q15020 963 aaKnown RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 TMEM67Q5HYA8 995 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 SLC9C2Q5TAH2 1124 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 SPATA1Q5VX52 437 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 TMED8Q6PL24 325 aaPredicted RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 KIF6Q6ZMV9 814 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 NFXL1Q6ZNB6 911 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 SRGAP1Q7Z6B7 1085 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 PROSER2Q86WR7 435 aaPredicted RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 MSANTD4Q8NCY6 345 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 ZCRB1Q8TBF4 217 aaKnown RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 RBM33Q96EV2 1170 aaKnown RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 CLIC6Q96NY7 704 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 STRBPQ96SI9 672 aaKnown RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 PYM1Q9BRP8 204 aaKnown RBP10.38□□□□□ -0.75
SNF8-210ENST00000511214 GBP3Q9H0R5 595 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 ZBTB3Q9H5J0 574 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 GJB4Q9NTQ9 266 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 MYO1AQ9UBC5 1043 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 RAB21Q9UL25 225 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 AKAP11Q9UKA4 1901 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 ARAP2Q8WZ64 1704 aa10.38□□□□□ -0.75
SNF8-210ENST00000511214 LRP5O75197 1615 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 TCRBV5S4A2TA0A5A2 114 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 ANKRD18BA2A2Z9 1011 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 MAP2K7O14733 419 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 ACTN4O43707 911 aaKnown RBP10.37□□□□□ -0.75
SNF8-210ENST00000511214 KIF5CO60282 957 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 ERLIN1O75477 346 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 A1BGP04217 495 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 PDE6AP16499 860 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 OAS2P29728 719 aaKnown RBP10.37□□□□□ -0.75
SNF8-210ENST00000511214 PBX1P40424 430 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 TRIM14Q14142 442 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 SMC1AQ14683 1233 aaKnown RBP10.37□□□□□ -0.75
SNF8-210ENST00000511214 FILIP1LQ4L180 1135 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 METTL24Q5JXM2 366 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 ISM2Q6H9L7 571 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 PPFIBP1Q86W92 1011 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 CNGA4Q8IV77 575 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 VGLL2Q8N8G2 317 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 IQUBQ8NA54 791 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 STAG1Q8WVM7 1258 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 AIFM3Q96NN9 605 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 WDR24Q96S15 920 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 FUT8Q9BYC5 575 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 PARD6BQ9BYG5 372 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 ST7Q9NRC1 585 aa10.37□□□□□ -0.75
SNF8-210ENST00000511214 AATFQ9NY61 560 aaKnown RBP eCLIP10.37□□□□□ -0.75
SNF8-210ENST00000511214 CWC15Q9P013 229 aaKnown RBP10.37□□□□□ -0.75
SNF8-210ENST00000511214 CDC23Q9UJX2 597 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms