RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-208	ENST00000510195	SLURP2	P0DP57	97 aa		32.57	■■■□□ 2.8
SNF8-208	ENST00000510195	PHIP	Q8WWQ0	1821 aa		32.56	■■■□□ 2.8
SNF8-208	ENST00000510195	TMEM106C	Q9BVX2	250 aa		32.56	■■■□□ 2.8
SNF8-208	ENST00000510195	EXOC6B	Q9Y2D4	811 aa		32.56	■■■□□ 2.8
SNF8-208	ENST00000510195	POTEF	A5A3E0	1075 aa		32.55	■■■□□ 2.8
SNF8-208	ENST00000510195	BCR	P11274	1271 aa		32.55	■■■□□ 2.8
SNF8-208	ENST00000510195	CAP2	P40123	477 aa		32.55	■■■□□ 2.8
SNF8-208	ENST00000510195	PSMC4	P43686	418 aa		32.55	■■■□□ 2.8
SNF8-208	ENST00000510195	GADL1	Q6ZQY3	521 aa		32.55	■■■□□ 2.8
SNF8-208	ENST00000510195	PIH1D3	Q9NQM4	214 aa	Known RBP	32.55	■■■□□ 2.8
SNF8-208	ENST00000510195	PTPRF	P10586	1907 aa		32.55	■■■□□ 2.8
SNF8-208	ENST00000510195	MKI67	P46013	3256 aa	Known RBP	32.55	■■■□□ 2.8
SNF8-208	ENST00000510195	TRIM75P	A6NK02	468 aa		32.54	■■■□□ 2.8
SNF8-208	ENST00000510195	HMMR	O75330	724 aa		32.54	■■■□□ 2.8
SNF8-208	ENST00000510195	ADGRA1	Q86SQ6	560 aa		32.54	■■■□□ 2.8
SNF8-208	ENST00000510195	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.54	■■■□□ 2.8
SNF8-208	ENST00000510195	SRRD	Q9UH36	339 aa		32.54	■■■□□ 2.8
SNF8-208	ENST00000510195	FAM196B	A6NMK8	535 aa		32.53	■■■□□ 2.8
SNF8-208	ENST00000510195	CYP2C8	P10632	490 aa		32.53	■■■□□ 2.8
SNF8-208	ENST00000510195	AACS	Q86V21	672 aa		32.53	■■■□□ 2.8
SNF8-208	ENST00000510195	METTL16	Q86W50	562 aa	Known RBP	32.53	■■■□□ 2.8
SNF8-208	ENST00000510195	TGFBRAP1	Q8WUH2	860 aa		32.53	■■■□□ 2.8
SNF8-208	ENST00000510195	TRIM47	Q96LD4	638 aa		32.53	■■■□□ 2.8
SNF8-208	ENST00000510195	ZBTB40	Q9NUA8	1239 aa		32.53	■■■□□ 2.8
SNF8-208	ENST00000510195	PRPF38B	Q5VTL8	546 aa	Known RBP	32.52	■■■□□ 2.8
SNF8-208	ENST00000510195	PROCA1	Q8NCQ7	364 aa	Predicted RBP	32.52	■■■□□ 2.8
SNF8-208	ENST00000510195	RHPN1	Q8TCX5	695 aa		32.52	■■■□□ 2.8
SNF8-208	ENST00000510195	AGTPBP1	Q9UPW5	1226 aa		32.52	■■■□□ 2.8
SNF8-208	ENST00000510195	MYO5A	Q9Y4I1	1855 aa	Known RBP	32.52	■■■□□ 2.8
SNF8-208	ENST00000510195	FLT1	P17948	1338 aa		32.51	■■■□□ 2.8
SNF8-208	ENST00000510195	FMNL1	O95466	1100 aa	Predicted RBP	32.51	■■■□□ 2.79
SNF8-208	ENST00000510195	CYP7A1	P22680	504 aa		32.51	■■■□□ 2.79
SNF8-208	ENST00000510195	ZNF280C	Q8ND82	737 aa		32.51	■■■□□ 2.79
SNF8-208	ENST00000510195	RCAN3	Q9UKA8	241 aa		32.51	■■■□□ 2.79
SNF8-208	ENST00000510195	FOCAD	Q5VW36	1801 aa		32.5	■■■□□ 2.79
SNF8-208	ENST00000510195	USP17L5	A8MUK1	530 aa		32.5	■■■□□ 2.79
SNF8-208	ENST00000510195	IDH1	O75874	414 aa	Known RBP	32.5	■■■□□ 2.79
SNF8-208	ENST00000510195	CTGF	P29279	349 aa		32.5	■■■□□ 2.79
SNF8-208	ENST00000510195	MAP3K12	Q12852	859 aa		32.5	■■■□□ 2.79
SNF8-208	ENST00000510195	MAPKAPK5	Q8IW41	473 aa		32.5	■■■□□ 2.79
SNF8-208	ENST00000510195	KIF1BP	Q96EK5	621 aa		32.5	■■■□□ 2.79
SNF8-208	ENST00000510195	GINM1	Q9NU53	330 aa		32.5	■■■□□ 2.79
SNF8-208	ENST00000510195	ZSWIM8	A7E2V4	1837 aa		32.49	■■■□□ 2.79
SNF8-208	ENST00000510195	OSBP	P22059	807 aa		32.49	■■■□□ 2.79
SNF8-208	ENST00000510195	CLASRP	Q8N2M8	674 aa	Known RBP	32.49	■■■□□ 2.79
SNF8-208	ENST00000510195	AS3MT	Q9HBK9	375 aa		32.49	■■■□□ 2.79
SNF8-208	ENST00000510195	PNMA3	Q9UL41	463 aa		32.49	■■■□□ 2.79
SNF8-208	ENST00000510195	COG6	Q9Y2V7	657 aa		32.49	■■■□□ 2.79
SNF8-208	ENST00000510195	FCGRT	P55899	365 aa		32.48	■■■□□ 2.79
SNF8-208	ENST00000510195	SPP2	Q13103	211 aa		32.48	■■■□□ 2.79
SNF8-208	ENST00000510195	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	32.48	■■■□□ 2.79
SNF8-208	ENST00000510195	CDK5RAP2	Q96SN8	1893 aa		32.48	■■■□□ 2.79
SNF8-208	ENST00000510195	ASNS	P08243	561 aa		32.47	■■■□□ 2.79
SNF8-208	ENST00000510195	TTF1	Q15361	905 aa	Predicted RBP	32.47	■■■□□ 2.79
SNF8-208	ENST00000510195	SMCR8	Q8TEV9	937 aa	Predicted RBP	32.47	■■■□□ 2.79
SNF8-208	ENST00000510195	RAB11FIP3	O75154	756 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	HLA-DOA	P06340	250 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	PABPC4	Q13310	644 aa	Known RBP eCLIP	32.46	■■■□□ 2.79	2e-11	■□□□□ 10.8
SNF8-208	ENST00000510195	RRP1B	Q14684	758 aa	Known RBP	32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	SH3D19	Q5HYK7	790 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	CCDC84	Q86UT8	332 aa	Predicted RBP	32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	MAGEB6	Q8N7X4	407 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	RAET1E	Q8TD07	263 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	WDR18	Q9BV38	432 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	TRIM34	Q9BYJ4	488 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	IL1RAPL2	Q9NP60	686 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	PALD1	Q9ULE6	856 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	ATAD5	Q96QE3	1844 aa		32.46	■■■□□ 2.79
SNF8-208	ENST00000510195	EN2	P19622	333 aa	Predicted RBP	32.45	■■■□□ 2.79
SNF8-208	ENST00000510195	SLC4A8	Q2Y0W8	1093 aa		32.45	■■■□□ 2.79
SNF8-208	ENST00000510195	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.45	■■■□□ 2.79
SNF8-208	ENST00000510195	SH3TC2	Q8TF17	1288 aa		32.45	■■■□□ 2.79
SNF8-208	ENST00000510195	MYPN	Q86TC9	1320 aa		32.45	■■■□□ 2.78
SNF8-208	ENST00000510195	DYNLL1	P63167	89 aa	Known RBP	32.44	■■■□□ 2.78
SNF8-208	ENST00000510195	SIRT2	Q8IXJ6	389 aa		32.44	■■■□□ 2.78
SNF8-208	ENST00000510195	ANTXR1	Q9H6X2	564 aa		32.44	■■■□□ 2.78
SNF8-208	ENST00000510195	SIPA1L1	O43166	1804 aa		32.44	■■■□□ 2.78
SNF8-208	ENST00000510195	GRK4	P32298	578 aa		32.43	■■■□□ 2.78
SNF8-208	ENST00000510195	PDE3A	Q14432	1141 aa		32.43	■■■□□ 2.78
SNF8-208	ENST00000510195	TREML2	Q5T2D2	321 aa		32.43	■■■□□ 2.78
SNF8-208	ENST00000510195	DNAJC18	Q9H819	358 aa		32.43	■■■□□ 2.78
SNF8-208	ENST00000510195	NDUFB9	Q9Y6M9	179 aa		32.42	■■■□□ 2.78
SNF8-208	ENST00000510195	MGAM	O43451	1857 aa		32.42	■■■□□ 2.78
SNF8-208	ENST00000510195	LOC285556	D6RIA3	1793 aa		32.41	■■■□□ 2.78
SNF8-208	ENST00000510195	IFIT2	P09913	472 aa	Known RBP	32.41	■■■□□ 2.78
SNF8-208	ENST00000510195	GCLC	P48506	637 aa	Predicted RBP	32.41	■■■□□ 2.78
SNF8-208	ENST00000510195	HMGCS2	P54868	508 aa		32.41	■■■□□ 2.78
SNF8-208	ENST00000510195	MIGA1	Q8NAN2	632 aa		32.41	■■■□□ 2.78
SNF8-208	ENST00000510195	ECM2	O94769	699 aa	Predicted RBP	32.4	■■■□□ 2.78
SNF8-208	ENST00000510195	USP5	P45974	858 aa		32.4	■■■□□ 2.78
SNF8-208	ENST00000510195	BACE1	P56817	501 aa		32.4	■■■□□ 2.78
SNF8-208	ENST00000510195	FAM110C	Q1W6H9	321 aa		32.4	■■■□□ 2.78
SNF8-208	ENST00000510195	C19orf81	C9J6K1	198 aa		32.39	■■■□□ 2.78
SNF8-208	ENST00000510195	PRKCZ	Q05513	592 aa		32.39	■■■□□ 2.78
SNF8-208	ENST00000510195	EHD4	Q9H223	541 aa		32.39	■■■□□ 2.78
SNF8-208	ENST00000510195	SAP30BP	Q9UHR5	308 aa	Known RBP	32.39	■■■□□ 2.78
SNF8-208	ENST00000510195	SLAIN1	Q8ND83	568 aa		32.38	■■■□□ 2.77
SNF8-208	ENST00000510195	TTC6	Q86TZ1	520 aa		32.37	■■■□□ 2.77
SNF8-208	ENST00000510195	ANKRD13C	Q8N6S4	541 aa		32.37	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms