RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 MSMPQ1L6U9 139 aa6.38□□□□□ -1.39
CAST-229ENST00000510098 MCTP1Q6DN14 999 aa6.38□□□□□ -1.39
CAST-229ENST00000510098 LRFN4Q6PJG9 635 aa6.38□□□□□ -1.39
CAST-229ENST00000510098 AGMOQ6ZNB7 445 aa6.38□□□□□ -1.39
CAST-229ENST00000510098 USP31Q70CQ4 1352 aa6.38□□□□□ -1.39
CAST-229ENST00000510098 UBE3DQ7Z6J8 389 aa6.38□□□□□ -1.39
CAST-229ENST00000510098 CRELD1Q96HD1 420 aa6.38□□□□□ -1.39
CAST-229ENST00000510098 LEFTY1O75610 366 aa6.37□□□□□ -1.39
CAST-229ENST00000510098 LIG3P49916 1009 aa6.37□□□□□ -1.39
CAST-229ENST00000510098 SEPT6Q14141 434 aa6.37□□□□□ -1.39
CAST-229ENST00000510098 ZBTB37Q5TC79 503 aa6.37□□□□□ -1.39
CAST-229ENST00000510098 TMEM87AQ8NBN3 555 aa6.37□□□□□ -1.39
CAST-229ENST00000510098 PLPPR2Q96GM1 343 aa6.37□□□□□ -1.39
CAST-229ENST00000510098 FANCGO15287 622 aa6.36□□□□□ -1.39
CAST-229ENST00000510098 RECKO95980 971 aa6.36□□□□□ -1.39
CAST-229ENST00000510098 RLBP1P12271 317 aa6.36□□□□□ -1.39
CAST-229ENST00000510098 TFE3P19532 575 aaPredicted RBP6.36□□□□□ -1.39
CAST-229ENST00000510098 ST13P50502 369 aaKnown RBP6.36□□□□□ -1.39
CAST-229ENST00000510098 CYP27C1Q4G0S4 372 aa6.36□□□□□ -1.39
CAST-229ENST00000510098 CYFIP1Q7L576 1253 aa6.36□□□□□ -1.39
CAST-229ENST00000510098 HDXQ7Z353 690 aa6.36□□□□□ -1.39
CAST-229ENST00000510098 NOC4LQ9BVI4 516 aaKnown RBP6.36□□□□□ -1.39
CAST-229ENST00000510098 BACH2Q9BYV9 841 aa6.36□□□□□ -1.39
CAST-229ENST00000510098 ZC3H7BQ9UGR2 993 aaKnown RBP6.36□□□□□ -1.39
CAST-229ENST00000510098 PRAMEF27A3QJZ7 478 aa6.35□□□□□ -1.39
CAST-229ENST00000510098 WNT11O96014 354 aa6.35□□□□□ -1.39
CAST-229ENST00000510098 WIPI1Q5MNZ9 446 aaPredicted RBP6.35□□□□□ -1.39
CAST-229ENST00000510098 DIEXFQ68CQ4 756 aaKnown RBP6.35□□□□□ -1.39
CAST-229ENST00000510098 CDC37L1Q7L3B6 337 aa6.35□□□□□ -1.39
CAST-229ENST00000510098 TOP6BLQ8N6T0 577 aa6.35□□□□□ -1.39
CAST-229ENST00000510098 DUSP23Q9BVJ7 150 aa6.35□□□□□ -1.39
CAST-229ENST00000510098 TLR6Q9Y2C9 796 aa6.35□□□□□ -1.39
CAST-229ENST00000510098 OAS3Q9Y6K5 1087 aaKnown RBP6.35□□□□□ -1.39
CAST-229ENST00000510098 F6X3S4 739 aa6.34□□□□□ -1.39
CAST-229ENST00000510098 GP2P55259 537 aaKnown RBP6.34□□□□□ -1.39
CAST-229ENST00000510098 FAM181AQ8N9Y4 354 aa6.34□□□□□ -1.39
CAST-229ENST00000510098 MIR1-1HGQ9H1L0 117 aa6.34□□□□□ -1.39
CAST-229ENST00000510098 BSDC1Q9NW68 430 aaPredicted RBP6.34□□□□□ -1.39
CAST-229ENST00000510098 CCDC39Q9UFE4 941 aa6.34□□□□□ -1.39
CAST-229ENST00000510098 ANGEL1Q9UNK9 670 aaKnown RBP6.34□□□□□ -1.39
CAST-229ENST00000510098 SNCAIPQ9Y6H5 919 aa6.34□□□□□ -1.39
CAST-229ENST00000510098 U3KQE9 123 aa6.34□□□□□ -1.39
CAST-229ENST00000510098 GFRA2O00451 464 aa6.33□□□□□ -1.4
CAST-229ENST00000510098 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
CAST-229ENST00000510098 KCT2Q8NC54 265 aa6.33□□□□□ -1.4
CAST-229ENST00000510098 PHC3Q8NDX5 983 aa6.33□□□□□ -1.4
CAST-229ENST00000510098 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
CAST-229ENST00000510098 JARID2Q92833 1246 aaPredicted RBP6.33□□□□□ -1.4
CAST-229ENST00000510098 FBRSQ9HAH7 460 aa6.33□□□□□ -1.4
CAST-229ENST00000510098 SCAMP3O14828 347 aaKnown RBP6.32□□□□□ -1.4
CAST-229ENST00000510098 PRNPP04156 253 aa6.32□□□□□ -1.4
CAST-229ENST00000510098 ETF1P62495 437 aaKnown RBP6.32□□□□□ -1.4
CAST-229ENST00000510098 NFXL1Q6ZNB6 911 aa6.32□□□□□ -1.4
CAST-229ENST00000510098 KRTAP1-3Q8IUG1 177 aa6.32□□□□□ -1.4
CAST-229ENST00000510098 PLD6Q8N2A8 252 aaKnown RBP6.32□□□□□ -1.4
CAST-229ENST00000510098 FMNL2Q96PY5 1086 aa6.32□□□□□ -1.4
CAST-229ENST00000510098 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
CAST-229ENST00000510098 PRDM10Q9NQV6 1147 aa6.32□□□□□ -1.4
CAST-229ENST00000510098 TCF3P15923 654 aa6.31□□□□□ -1.4
CAST-229ENST00000510098 GRK4P32298 578 aa6.31□□□□□ -1.4
CAST-229ENST00000510098 ZNF76P36508 570 aa6.31□□□□□ -1.4
CAST-229ENST00000510098 SLBPQ14493 270 aaKnown RBP eCLIP6.31□□□□□ -1.4
CAST-229ENST00000510098 NKG7Q16617 165 aa6.31□□□□□ -1.4
CAST-229ENST00000510098 ARHGAP27Q6ZUM4 889 aa6.31□□□□□ -1.4
CAST-229ENST00000510098 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
CAST-229ENST00000510098 FAM214BQ7L5A3 538 aa6.31□□□□□ -1.4
CAST-229ENST00000510098 HEXIM2Q96MH2 286 aaKnown RBP6.31□□□□□ -1.4
CAST-229ENST00000510098 PF4P02776 101 aa6.3□□□□□ -1.4
CAST-229ENST00000510098 CAMK2GQ13555 558 aaPredicted RBP6.3□□□□□ -1.4
CAST-229ENST00000510098 LDLRAD1Q5T700 205 aa6.3□□□□□ -1.4
CAST-229ENST00000510098 VSIG10LQ86VR7 867 aa6.3□□□□□ -1.4
CAST-229ENST00000510098 NETO1Q8TDF5 533 aa6.3□□□□□ -1.4
CAST-229ENST00000510098 RNF34Q969K3 372 aa6.3□□□□□ -1.4
CAST-229ENST00000510098 LRIG2O94898 1065 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 GBP2P32456 591 aaPredicted RBP6.29□□□□□ -1.4
CAST-229ENST00000510098 OXCT1P55809 520 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 RPL6Q02878 288 aaKnown RBP6.29□□□□□ -1.4
CAST-229ENST00000510098 LMNB2Q03252 620 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 BNC2Q6ZN30 1099 aaPredicted RBP6.29□□□□□ -1.4
CAST-229ENST00000510098 HS2ST1Q7LGA3 356 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 HID1Q8IV36 788 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 TMEM74Q96NL1 305 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 RSRP1Q9BUV0 290 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
CAST-229ENST00000510098 METTL5Q9NRN9 209 aaKnown RBP6.29□□□□□ -1.4
CAST-229ENST00000510098 MINDY4BA8MYZ0 360 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 SLITRK5O94991 958 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 EOMESO95936 686 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 IRAK1P51617 712 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 FANCCQ00597 558 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 PWP1Q13610 501 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 CCDC84Q86UT8 332 aaPredicted RBP6.28□□□□□ -1.4
CAST-229ENST00000510098 FLCNQ8NFG4 579 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 BCL7CQ8WUZ0 217 aaPredicted RBP6.28□□□□□ -1.4
CAST-229ENST00000510098 RHOVQ96L33 236 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 GTF2IRD1Q9UHL9 959 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 PLAGL2Q9UPG8 496 aa6.28□□□□□ -1.4
CAST-229ENST00000510098 TACC3Q9Y6A5 838 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms