RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 SALL3Q9BXA9 1300 aa28.77■■■□□ 2.2
ATP2C1-217ENST00000509662 MAPKAPK5Q8IW41 473 aa28.77■■■□□ 2.2
ATP2C1-217ENST00000509662 DNAJC2Q99543 621 aaKnown RBP28.77■■■□□ 2.2
ATP2C1-217ENST00000509662 BOLA2Q9H3K6 86 aa28.77■■■□□ 2.2
ATP2C1-217ENST00000509662 BTBD19C9JJ37 291 aa28.76■■■□□ 2.19
ATP2C1-217ENST00000509662 PTPRAP18433 802 aa28.76■■■□□ 2.19
ATP2C1-217ENST00000509662 DYNLL1P63167 89 aaKnown RBP28.76■■■□□ 2.19
ATP2C1-217ENST00000509662 SP3Q02447 781 aa28.76■■■□□ 2.19
ATP2C1-217ENST00000509662 MIGA1Q8NAN2 632 aa28.76■■■□□ 2.19
ATP2C1-217ENST00000509662 GPATCH3Q96I76 525 aa28.76■■■□□ 2.19
ATP2C1-217ENST00000509662 HAUS7Q99871 368 aa28.76■■■□□ 2.19
ATP2C1-217ENST00000509662 GOLIM4O00461 696 aa28.75■■■□□ 2.19
ATP2C1-217ENST00000509662 TSHZ3Q63HK5 1081 aa28.75■■■□□ 2.19
ATP2C1-217ENST00000509662 FOXP4Q8IVH2 680 aaPredicted RBP28.75■■■□□ 2.19
ATP2C1-217ENST00000509662 FLT1P17948 1338 aa28.74■■■□□ 2.19
ATP2C1-217ENST00000509662 SLURP2P0DP57 97 aa28.74■■■□□ 2.19
ATP2C1-217ENST00000509662 SLC9C2Q5TAH2 1124 aa28.74■■■□□ 2.19
ATP2C1-217ENST00000509662 ANKRD23Q86SG2 305 aa28.74■■■□□ 2.19
ATP2C1-217ENST00000509662 EDC3Q96F86 508 aaKnown RBP28.74■■■□□ 2.19
ATP2C1-217ENST00000509662 TRIM34Q9BYJ4 488 aa28.74■■■□□ 2.19
ATP2C1-217ENST00000509662 FAM196BA6NMK8 535 aa28.73■■■□□ 2.19
ATP2C1-217ENST00000509662 USP5P45974 858 aa28.73■■■□□ 2.19
ATP2C1-217ENST00000509662 ARHGEF6Q15052 776 aa28.73■■■□□ 2.19
ATP2C1-217ENST00000509662 FASTKD5Q7L8L6 764 aaKnown RBP28.73■■■□□ 2.19
ATP2C1-217ENST00000509662 ZBTB47Q9UFB7 747 aaPredicted RBP28.73■■■□□ 2.19
ATP2C1-217ENST00000509662 TTC41PQ6P2S7 1318 aa28.72■■■□□ 2.19
ATP2C1-217ENST00000509662 HLA-DOAP06340 250 aa28.72■■■□□ 2.19
ATP2C1-217ENST00000509662 CENPBP07199 599 aaPredicted RBP28.72■■■□□ 2.19
ATP2C1-217ENST00000509662 FBXO46Q6PJ61 603 aaPredicted RBP28.72■■■□□ 2.19
ATP2C1-217ENST00000509662 CRACR2BQ8N4Y2 399 aaPredicted RBP28.72■■■□□ 2.19
ATP2C1-217ENST00000509662 PAG1Q9NWQ8 432 aa28.72■■■□□ 2.19
ATP2C1-217ENST00000509662 PALD1Q9ULE6 856 aa28.72■■■□□ 2.19
ATP2C1-217ENST00000509662 AFG3L2Q9Y4W6 797 aa28.72■■■□□ 2.19
ATP2C1-217ENST00000509662 TLR2O60603 784 aa28.71■■■□□ 2.19
ATP2C1-217ENST00000509662 MX1P20591 662 aa28.71■■■□□ 2.19
ATP2C1-217ENST00000509662 TRIM17Q9Y577 477 aa28.71■■■□□ 2.19
ATP2C1-217ENST00000509662 MAGEB6P1A0A0J9YX57 407 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 PDHXO00330 501 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 PDE6AP16499 860 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 CAP2P40123 477 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 NUCB1Q02818 461 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 B4GALNT3Q6L9W6 998 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 PI4K2BQ8TCG2 481 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 CD99L2Q8TCZ2 262 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 TBC1D2Q9BYX2 928 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 LNPKQ9C0E8 428 aa28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.7■■■□□ 2.181e-6■■■□□ 16.2
ATP2C1-217ENST00000509662 SAP30BPQ9UHR5 308 aaKnown RBP28.7■■■□□ 2.18
ATP2C1-217ENST00000509662 HPS5Q9UPZ3 1129 aa28.69■■■□□ 2.18
ATP2C1-217ENST00000509662 DOCK1Q14185 1865 aa28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 A0A0G2JLL6 359 aaPredicted RBP28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 OTOP1Q7RTM1 612 aa28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 PRRT2Q7Z6L0 340 aaPredicted RBP28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 METTL16Q86W50 562 aaKnown RBP28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 CHD1LQ86WJ1 897 aa28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 EFCC1Q9HA90 598 aa28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 CDK5RAP2Q96SN8 1893 aa28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 ZNF532Q9HCE3 1301 aa28.68■■■□□ 2.18
ATP2C1-217ENST00000509662 FOCADQ5VW36 1801 aa28.67■■■□□ 2.18
ATP2C1-217ENST00000509662 MOGSQ13724 837 aa28.67■■■□□ 2.18
ATP2C1-217ENST00000509662 CRNKL1Q9BZJ0 848 aaKnown RBP28.67■■■□□ 2.18
ATP2C1-217ENST00000509662 TRIM75PA6NK02 468 aa28.66■■■□□ 2.18
ATP2C1-217ENST00000509662 USP17L5A8MUK1 530 aa28.66■■■□□ 2.18
ATP2C1-217ENST00000509662 ERC2O15083 957 aa28.66■■■□□ 2.18
ATP2C1-217ENST00000509662 KIF22Q14807 665 aa28.66■■■□□ 2.18
ATP2C1-217ENST00000509662 GADL1Q6ZQY3 521 aa28.66■■■□□ 2.18
ATP2C1-217ENST00000509662 TTC6Q86TZ1 520 aa28.66■■■□□ 2.18
ATP2C1-217ENST00000509662 RIOK1Q9BRS2 568 aaKnown RBP28.66■■■□□ 2.18
ATP2C1-217ENST00000509662 STAP2Q9UGK3 403 aa28.66■■■□□ 2.18
ATP2C1-217ENST00000509662 GLRX3O76003 335 aaKnown RBP28.65■■■□□ 2.18
ATP2C1-217ENST00000509662 ZNF280CQ8ND82 737 aa28.65■■■□□ 2.18
ATP2C1-217ENST00000509662 AS3MTQ9HBK9 375 aa28.65■■■□□ 2.18
ATP2C1-217ENST00000509662 GINM1Q9NU53 330 aa28.65■■■□□ 2.18
ATP2C1-217ENST00000509662 ASNSP08243 561 aa28.64■■■□□ 2.18
ATP2C1-217ENST00000509662 PDE1AP54750 535 aa28.64■■■□□ 2.18
ATP2C1-217ENST00000509662 ZSCAN25Q6NSZ9 544 aa28.64■■■□□ 2.18
ATP2C1-217ENST00000509662 GPAT2Q6NUI2 795 aa28.64■■■□□ 2.18
ATP2C1-217ENST00000509662 PARK7Q99497 189 aaKnown RBP28.64■■■□□ 2.18
ATP2C1-217ENST00000509662 TCRBV5S4A2TA0A5A2 114 aa28.63■■■□□ 2.17
ATP2C1-217ENST00000509662 SPP2Q13103 211 aa28.63■■■□□ 2.17
ATP2C1-217ENST00000509662 RRP1BQ14684 758 aaKnown RBP28.63■■■□□ 2.17
ATP2C1-217ENST00000509662 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.63■■■□□ 2.17
ATP2C1-217ENST00000509662 SLC45A1Q9Y2W3 748 aa28.63■■■□□ 2.17
ATP2C1-217ENST00000509662 ADD2P35612 726 aa28.62■■■□□ 2.17
ATP2C1-217ENST00000509662 SLC4A8Q2Y0W8 1093 aa28.62■■■□□ 2.17
ATP2C1-217ENST00000509662 C17orf99Q6UX52 265 aa28.62■■■□□ 2.17
ATP2C1-217ENST00000509662 CCDC84Q86UT8 332 aaPredicted RBP28.62■■■□□ 2.17
ATP2C1-217ENST00000509662 PTPN22Q9Y2R2 807 aa28.62■■■□□ 2.17
ATP2C1-217ENST00000509662 MYH1P12882 1939 aa28.61■■■□□ 2.17
ATP2C1-217ENST00000509662 KBTBD3Q8NAB2 608 aa28.61■■■□□ 2.17
ATP2C1-217ENST00000509662 EHD4Q9H223 541 aa28.61■■■□□ 2.17
ATP2C1-217ENST00000509662 DNAJC18Q9H819 358 aa28.61■■■□□ 2.17
ATP2C1-217ENST00000509662 CPA4Q9UI42 421 aa28.61■■■□□ 2.17
ATP2C1-217ENST00000509662 SERPINB13Q9UIV8 391 aa28.61■■■□□ 2.17
ATP2C1-217ENST00000509662 POLR3DP05423 398 aaPredicted RBP28.6■■■□□ 2.17
ATP2C1-217ENST00000509662 LACTBP83111 547 aaPredicted RBP28.6■■■□□ 2.17
ATP2C1-217ENST00000509662 UBE3CQ15386 1083 aa28.6■■■□□ 2.17
ATP2C1-217ENST00000509662 PROCA1Q8NCQ7 364 aaPredicted RBP28.6■■■□□ 2.17
ATP2C1-217ENST00000509662 PHIPQ8WWQ0 1821 aa28.59■■■□□ 2.17
ATP2C1-217ENST00000509662 GNRH1P01148 92 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms