RNA–Protein interactions for RNA: ENST00000509632.5

SDHA-212, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-212ENST00000509632 TRIM47Q96LD4 638 aa26.48■■□□□ 1.83
SDHA-212ENST00000509632 DHX36Q9H2U1 1008 aaKnown RBP26.48■■□□□ 1.83
SDHA-212ENST00000509632 COG6Q9Y2V7 657 aa26.48■■□□□ 1.83
SDHA-212ENST00000509632 IGSF3O75054 1194 aa26.47■■□□□ 1.83
SDHA-212ENST00000509632 EN2P19622 333 aaPredicted RBP26.47■■□□□ 1.83
SDHA-212ENST00000509632 CYP7A1P22680 504 aa26.47■■□□□ 1.83
SDHA-212ENST00000509632 HOXD10P28358 340 aa26.47■■□□□ 1.83
SDHA-212ENST00000509632 PRMT2P55345 433 aa26.47■■□□□ 1.83
SDHA-212ENST00000509632 HSP90AB4PQ58FF6 505 aa26.47■■□□□ 1.83
SDHA-212ENST00000509632 NDUFB9Q9Y6M9 179 aa26.47■■□□□ 1.83
SDHA-212ENST00000509632 IDH1O75874 414 aaKnown RBP26.46■■□□□ 1.83
SDHA-212ENST00000509632 MYCP01106 439 aaPredicted RBP26.46■■□□□ 1.83
SDHA-212ENST00000509632 CAP2P40123 477 aa26.46■■□□□ 1.83
SDHA-212ENST00000509632 RRP1BQ14684 758 aaKnown RBP26.46■■□□□ 1.83
SDHA-212ENST00000509632 SH3TC2Q8TF17 1288 aa26.46■■□□□ 1.83
SDHA-212ENST00000509632 IL1RAPL2Q9NP60 686 aa26.46■■□□□ 1.83
SDHA-212ENST00000509632 HERC5Q9UII4 1024 aaKnown RBP26.46■■□□□ 1.83
SDHA-212ENST00000509632 BCRP11274 1271 aa26.45■■□□□ 1.82
SDHA-212ENST00000509632 DYNLL1P63167 89 aaKnown RBP26.45■■□□□ 1.82
SDHA-212ENST00000509632 SPP2Q13103 211 aa26.45■■□□□ 1.82
SDHA-212ENST00000509632 RPAP2Q8IXW5 612 aaPredicted RBP26.45■■□□□ 1.82
SDHA-212ENST00000509632 RHPN1Q8TCX5 695 aa26.45■■□□□ 1.82
SDHA-212ENST00000509632 SRRDQ9UH36 339 aa26.45■■□□□ 1.82
SDHA-212ENST00000509632 DDX19BQ9UMR2 479 aa26.45■■□□□ 1.82
SDHA-212ENST00000509632 SLC45A1Q9Y2W3 748 aa26.45■■□□□ 1.82
SDHA-212ENST00000509632 COL2A1P02458 1487 aaPredicted RBP26.44■■□□□ 1.82
SDHA-212ENST00000509632 OSBPP22059 807 aa26.44■■□□□ 1.82
SDHA-212ENST00000509632 SLC4A8Q2Y0W8 1093 aa26.44■■□□□ 1.82
SDHA-212ENST00000509632 FOXP4Q8IVH2 680 aaPredicted RBP26.44■■□□□ 1.82
SDHA-212ENST00000509632 ANTXR1Q9H6X2 564 aa26.44■■□□□ 1.82
SDHA-212ENST00000509632 RCAN3Q9UKA8 241 aa26.44■■□□□ 1.82
SDHA-212ENST00000509632 PALD1Q9ULE6 856 aa26.44■■□□□ 1.82
SDHA-212ENST00000509632 APBB1O00213 710 aa26.43■■□□□ 1.82
SDHA-212ENST00000509632 ZNF280CQ8ND82 737 aa26.43■■□□□ 1.82
SDHA-212ENST00000509632 ZBTB40Q9NUA8 1239 aa26.43■■□□□ 1.82
SDHA-212ENST00000509632 AGTPBP1Q9UPW5 1226 aa26.43■■□□□ 1.82
SDHA-212ENST00000509632 FLT1P17948 1338 aa26.42■■□□□ 1.82
SDHA-212ENST00000509632 CENPFP49454 3210 aa26.42■■□□□ 1.82
SDHA-212ENST00000509632 USP17L5A8MUK1 530 aa26.42■■□□□ 1.82
SDHA-212ENST00000509632 PRPF38BQ5VTL8 546 aaKnown RBP26.42■■□□□ 1.82
SDHA-212ENST00000509632 MAGEB6Q8N7X4 407 aa26.42■■□□□ 1.82
SDHA-212ENST00000509632 RAET1EQ8TD07 263 aa26.42■■□□□ 1.82
SDHA-212ENST00000509632 BCL11AQ9H165 835 aa26.42■■□□□ 1.82
SDHA-212ENST00000509632 SAP30BPQ9UHR5 308 aaKnown RBP26.42■■□□□ 1.82
SDHA-212ENST00000509632 HMMRO75330 724 aa26.41■■□□□ 1.82
SDHA-212ENST00000509632 FCGRTP55899 365 aa26.41■■□□□ 1.82
SDHA-212ENST00000509632 TREML2Q5T2D2 321 aa26.41■■□□□ 1.82
SDHA-212ENST00000509632 SIRT2Q8IXJ6 389 aa26.41■■□□□ 1.82
SDHA-212ENST00000509632 CRACR2BQ8N4Y2 399 aaPredicted RBP26.41■■□□□ 1.82
SDHA-212ENST00000509632 MIGA1Q8NAN2 632 aa26.41■■□□□ 1.82
SDHA-212ENST00000509632 SMCR8Q8TEV9 937 aaPredicted RBP26.41■■□□□ 1.82
SDHA-212ENST00000509632 TRIM34Q9BYJ4 488 aa26.41■■□□□ 1.82
SDHA-212ENST00000509632 TBC1D2Q9BYX2 928 aa26.41■■□□□ 1.82
SDHA-212ENST00000509632 ZSWIM8A7E2V4 1837 aa26.4■■□□□ 1.82
SDHA-212ENST00000509632 MAP3K12Q12852 859 aa26.4■■□□□ 1.82
SDHA-212ENST00000509632 CLASRPQ8N2M8 674 aaKnown RBP26.4■■□□□ 1.82
SDHA-212ENST00000509632 MYPNQ86TC9 1320 aa26.39■■□□□ 1.82
SDHA-212ENST00000509632 HMGCS2P54868 508 aa26.39■■□□□ 1.82
SDHA-212ENST00000509632 METTL16Q86W50 562 aaKnown RBP26.39■■□□□ 1.82
SDHA-212ENST00000509632 PROCA1Q8NCQ7 364 aaPredicted RBP26.39■■□□□ 1.82
SDHA-212ENST00000509632 KIF1BPQ96EK5 621 aa26.39■■□□□ 1.82
SDHA-212ENST00000509632 AS3MTQ9HBK9 375 aa26.39■■□□□ 1.82
SDHA-212ENST00000509632 DOCK1Q14185 1865 aa26.38■■□□□ 1.81
SDHA-212ENST00000509632 USP5P45974 858 aa26.38■■□□□ 1.81
SDHA-212ENST00000509632 CHMP4BQ9H444 224 aaKnown RBP26.38■■□□□ 1.81
SDHA-212ENST00000509632 DNAJC18Q9H819 358 aa26.38■■□□□ 1.81
SDHA-212ENST00000509632 MYO5AQ9Y4I1 1855 aaKnown RBP26.37■■□□□ 1.81
SDHA-212ENST00000509632 HLA-DOAP06340 250 aa26.37■■□□□ 1.81
SDHA-212ENST00000509632 IFIT2P09913 472 aaKnown RBP26.37■■□□□ 1.81
SDHA-212ENST00000509632 GRK4P32298 578 aa26.37■■□□□ 1.81
SDHA-212ENST00000509632 JAG1P78504 1218 aa26.37■■□□□ 1.81
SDHA-212ENST00000509632 PRKCZQ05513 592 aa26.37■■□□□ 1.81
SDHA-212ENST00000509632 ANKRD13CQ8N6S4 541 aa26.37■■□□□ 1.81
SDHA-212ENST00000509632 PNMA3Q9UL41 463 aa26.37■■□□□ 1.81
SDHA-212ENST00000509632 ASNSP08243 561 aa26.36■■□□□ 1.81
SDHA-212ENST00000509632 CERS3Q8IU89 383 aa26.36■■□□□ 1.81
SDHA-212ENST00000509632 WDR18Q9BV38 432 aa26.36■■□□□ 1.81
SDHA-212ENST00000509632 GABRQQ9UN88 632 aa26.36■■□□□ 1.81
SDHA-212ENST00000509632 PHIPQ8WWQ0 1821 aa26.36■■□□□ 1.81
SDHA-212ENST00000509632 RAB11FIP3O75154 756 aa26.35■■□□□ 1.81
SDHA-212ENST00000509632 GDF11O95390 407 aa26.35■■□□□ 1.81
SDHA-212ENST00000509632 PABPC4Q13310 644 aaKnown RBP eCLIP26.35■■□□□ 1.81
SDHA-212ENST00000509632 TTF1Q15361 905 aaPredicted RBP26.35■■□□□ 1.81
SDHA-212ENST00000509632 MTFR1Q15390 333 aa26.35■■□□□ 1.81
SDHA-212ENST00000509632 SH3D19Q5HYK7 790 aa26.35■■□□□ 1.81
SDHA-212ENST00000509632 BIN2Q9UBW5 565 aaPredicted RBP26.35■■□□□ 1.81
SDHA-212ENST00000509632 SHROOM1Q2M3G4 852 aaPredicted RBP26.34■■□□□ 1.81
SDHA-212ENST00000509632 TMED8Q6PL24 325 aaPredicted RBP26.34■■□□□ 1.81
SDHA-212ENST00000509632 TNPO2O14787 897 aaKnown RBP26.33■■□□□ 1.81
SDHA-212ENST00000509632 BACE1P56817 501 aa26.33■■□□□ 1.81
SDHA-212ENST00000509632 SLC9C2Q5TAH2 1124 aa26.33■■□□□ 1.81
SDHA-212ENST00000509632 C20orf194Q5TEA3 1177 aa26.33■■□□□ 1.81
SDHA-212ENST00000509632 GINM1Q9NU53 330 aa26.33■■□□□ 1.81
SDHA-212ENST00000509632 PTPRFP10586 1907 aa26.32■■□□□ 1.8
SDHA-212ENST00000509632 FLT3LGP49771 235 aa26.32■■□□□ 1.8
SDHA-212ENST00000509632 MTMR2Q13614 643 aa26.32■■□□□ 1.8
SDHA-212ENST00000509632 DNAJC2Q99543 621 aaKnown RBP26.32■■□□□ 1.8
SDHA-212ENST00000509632 ASCC2Q9H1I8 757 aaPredicted RBP26.32■■□□□ 1.8
SDHA-212ENST00000509632 TMOD4Q9NZQ9 345 aa26.32■■□□□ 1.8
SDHA-212ENST00000509632 MAST2Q6P0Q8 1798 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms