RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 BCRP11274 1271 aa18.82■□□□□ 0.6
TPM3-219ENST00000509409 SPP2Q13103 211 aa18.82■□□□□ 0.6
TPM3-219ENST00000509409 MAPKAPK5Q8IW41 473 aa18.82■□□□□ 0.6
TPM3-219ENST00000509409 SMCR8Q8TEV9 937 aaPredicted RBP18.82■□□□□ 0.6
TPM3-219ENST00000509409 ZNF512BQ96KM6 892 aaPredicted RBP18.82■□□□□ 0.6
TPM3-219ENST00000509409 TRIM34Q9BYJ4 488 aa18.82■□□□□ 0.6
TPM3-219ENST00000509409 DHX36Q9H2U1 1008 aaKnown RBP18.82■□□□□ 0.6
TPM3-219ENST00000509409 PI4KBQ9UBF8 816 aa18.82■□□□□ 0.6
TPM3-219ENST00000509409 SLC45A1Q9Y2W3 748 aa18.82■□□□□ 0.6
TPM3-219ENST00000509409 ZBED9Q6R2W3 1325 aa18.81■□□□□ 0.6
TPM3-219ENST00000509409 GRK4P32298 578 aa18.81■□□□□ 0.6
TPM3-219ENST00000509409 CAP2P40123 477 aa18.81■□□□□ 0.6
TPM3-219ENST00000509409 PPP4CP60510 307 aa18.81■□□□□ 0.6
TPM3-219ENST00000509409 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
TPM3-219ENST00000509409 EAF2Q96CJ1 260 aaPredicted RBP18.81■□□□□ 0.6
TPM3-219ENST00000509409 PIH1D3Q9NQM4 214 aaKnown RBP18.81■□□□□ 0.6
TPM3-219ENST00000509409 TLR7Q9NYK1 1049 aaKnown RBP18.81■□□□□ 0.6
TPM3-219ENST00000509409 HERC5Q9UII4 1024 aaKnown RBP18.81■□□□□ 0.6
TPM3-219ENST00000509409 DBNLQ9UJU6 430 aaKnown RBP18.81■□□□□ 0.6
TPM3-219ENST00000509409 CENPFP49454 3210 aa18.8■□□□□ 0.6
TPM3-219ENST00000509409 USP17L5A8MUK1 530 aa18.8■□□□□ 0.6
TPM3-219ENST00000509409 MS4A1P11836 297 aa18.8■□□□□ 0.6
TPM3-219ENST00000509409 CYP7A1P22680 504 aa18.8■□□□□ 0.6
TPM3-219ENST00000509409 ZNF280CQ8ND82 737 aa18.8■□□□□ 0.6
TPM3-219ENST00000509409 TBC1D2Q9BYX2 928 aa18.8■□□□□ 0.6
TPM3-219ENST00000509409 AGTPBP1Q9UPW5 1226 aa18.8■□□□□ 0.6
TPM3-219ENST00000509409 EXOC6BQ9Y2D4 811 aa18.8■□□□□ 0.6
TPM3-219ENST00000509409 IDH1O75874 414 aaKnown RBP18.79■□□□□ 0.6
TPM3-219ENST00000509409 PRKCZQ05513 592 aa18.79■□□□□ 0.6
TPM3-219ENST00000509409 MTFR1Q15390 333 aa18.79■□□□□ 0.6
TPM3-219ENST00000509409 ERC1Q8IUD2 1116 aa18.79■□□□□ 0.6
TPM3-219ENST00000509409 CRACR2BQ8N4Y2 399 aaPredicted RBP18.79■□□□□ 0.6
TPM3-219ENST00000509409 AS3MTQ9HBK9 375 aa18.79■□□□□ 0.6
TPM3-219ENST00000509409 PNMA3Q9UL41 463 aa18.79■□□□□ 0.6
TPM3-219ENST00000509409 KIAA0100Q14667 2235 aaKnown RBP18.78■□□□□ 0.6
TPM3-219ENST00000509409 IGSF3O75054 1194 aa18.78■□□□□ 0.6
TPM3-219ENST00000509409 HMGCS2P54868 508 aa18.78■□□□□ 0.6
TPM3-219ENST00000509409 DYNLL1P63167 89 aaKnown RBP18.78■□□□□ 0.6
TPM3-219ENST00000509409 UBXN2AP68543 259 aa18.78■□□□□ 0.6
TPM3-219ENST00000509409 PABPC4Q13310 644 aaKnown RBP eCLIP18.78■□□□□ 0.62e-26■■■□□ 15.7
TPM3-219ENST00000509409 RRP1BQ14684 758 aaKnown RBP18.78■□□□□ 0.6
TPM3-219ENST00000509409 TREML2Q5T2D2 321 aa18.78■□□□□ 0.6
TPM3-219ENST00000509409 ADGRA1Q86SQ6 560 aa18.78■□□□□ 0.6
TPM3-219ENST00000509409 AACSQ86V21 672 aa18.78■□□□□ 0.6
TPM3-219ENST00000509409 FOXP4Q8IVH2 680 aaPredicted RBP18.78■□□□□ 0.6
TPM3-219ENST00000509409 PROCA1Q8NCQ7 364 aaPredicted RBP18.78■□□□□ 0.6
TPM3-219ENST00000509409 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
TPM3-219ENST00000509409 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
TPM3-219ENST00000509409 GABRQQ9UN88 632 aa18.78■□□□□ 0.6
TPM3-219ENST00000509409 TNPO2O14787 897 aaKnown RBP18.77■□□□□ 0.6
TPM3-219ENST00000509409 HLA-DOAP06340 250 aa18.77■□□□□ 0.6
TPM3-219ENST00000509409 HSP90AB4PQ58FF6 505 aa18.77■□□□□ 0.6
TPM3-219ENST00000509409 ANKRD13CQ8N6S4 541 aa18.77■□□□□ 0.6
TPM3-219ENST00000509409 GCC1Q96CN9 775 aa18.77■□□□□ 0.6
TPM3-219ENST00000509409 PALD1Q9ULE6 856 aa18.77■□□□□ 0.6
TPM3-219ENST00000509409 NDUFB9Q9Y6M9 179 aa18.77■□□□□ 0.6
TPM3-219ENST00000509409 DOCK2Q92608 1830 aa18.77■□□□□ 0.59
TPM3-219ENST00000509409 FLT1P17948 1338 aa18.76■□□□□ 0.59
TPM3-219ENST00000509409 USP5P45974 858 aa18.76■□□□□ 0.59
TPM3-219ENST00000509409 MAGEB6Q8N7X4 407 aa18.76■□□□□ 0.59
TPM3-219ENST00000509409 MIGA1Q8NAN2 632 aa18.76■□□□□ 0.59
TPM3-219ENST00000509409 RNF208Q9H0X6 261 aa18.76■□□□□ 0.59
TPM3-219ENST00000509409 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
TPM3-219ENST00000509409 COL2A1P02458 1487 aaPredicted RBP18.76■□□□□ 0.59
TPM3-219ENST00000509409 APBB1O00213 710 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 ADCY3O60266 1144 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 ASNSP08243 561 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 CCL5P13501 91 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 FLT3LGP49771 235 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 MAP3K12Q12852 859 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 SLAIN1Q8ND83 568 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 NKX2-3Q8TAU0 364 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 COA7Q96BR5 231 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 IL1RAPL2Q9NP60 686 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
TPM3-219ENST00000509409 GDF11O95390 407 aa18.74■□□□□ 0.59
TPM3-219ENST00000509409 RHPN1Q8TCX5 695 aa18.74■□□□□ 0.59
TPM3-219ENST00000509409 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
TPM3-219ENST00000509409 ZSWIM8A7E2V4 1837 aa18.74■□□□□ 0.59
TPM3-219ENST00000509409 HMMRO75330 724 aa18.73■□□□□ 0.59
TPM3-219ENST00000509409 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
TPM3-219ENST00000509409 SH3D19Q5HYK7 790 aa18.73■□□□□ 0.59
TPM3-219ENST00000509409 CERS3Q8IU89 383 aa18.73■□□□□ 0.59
TPM3-219ENST00000509409 WDR18Q9BV38 432 aa18.73■□□□□ 0.59
TPM3-219ENST00000509409 ASCC2Q9H1I8 757 aaPredicted RBP18.73■□□□□ 0.59
TPM3-219ENST00000509409 COG6Q9Y2V7 657 aa18.73■□□□□ 0.59
TPM3-219ENST00000509409 MKI67P46013 3256 aaKnown RBP18.72■□□□□ 0.59
TPM3-219ENST00000509409 BACE1P56817 501 aa18.72■□□□□ 0.59
TPM3-219ENST00000509409 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
TPM3-219ENST00000509409 MTMR2Q13614 643 aa18.72■□□□□ 0.59
TPM3-219ENST00000509409 FAM110CQ1W6H9 321 aa18.72■□□□□ 0.59
TPM3-219ENST00000509409 METTL16Q86W50 562 aaKnown RBP18.72■□□□□ 0.59
TPM3-219ENST00000509409 RPAP2Q8IXW5 612 aaPredicted RBP18.72■□□□□ 0.59
TPM3-219ENST00000509409 CLASRPQ8N2M8 674 aaKnown RBP18.72■□□□□ 0.59
TPM3-219ENST00000509409 DNAJC18Q9H819 358 aa18.72■□□□□ 0.59
TPM3-219ENST00000509409 GINM1Q9NU53 330 aa18.72■□□□□ 0.59
TPM3-219ENST00000509409 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
TPM3-219ENST00000509409 C19orf81C9J6K1 198 aa18.71■□□□□ 0.59
TPM3-219ENST00000509409 GJB1P08034 283 aa18.71■□□□□ 0.59
TPM3-219ENST00000509409 IFIT2P09913 472 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms