RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 PPARAQ07869 468 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 STK11IPQ8N1F8 1099 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 MAP4K1Q92918 833 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 ZNF287Q9HBT7 754 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 GBA2Q9HCG7 927 aaPredicted RBP17.65■□□□□ 0.42
RNF4-213ENST00000509388 ZMYM6O95789 1325 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 PASKQ96RG2 1323 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 ECM29Q5VYK3 1845 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 TBC1D12O60347 775 aa17.64■□□□□ 0.41
RNF4-213ENST00000509388 FKBP1BP68106 108 aa17.64■□□□□ 0.41
RNF4-213ENST00000509388 LSG1Q9H089 658 aaKnown RBP17.64■□□□□ 0.41
RNF4-213ENST00000509388 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
RNF4-213ENST00000509388 SWAP70Q9UH65 585 aa17.64■□□□□ 0.41
RNF4-213ENST00000509388 TAOK2Q9UL54 1235 aa17.64■□□□□ 0.41
RNF4-213ENST00000509388 FAM196BA6NMK8 535 aa17.63■□□□□ 0.41
RNF4-213ENST00000509388 HAND2P61296 217 aa17.63■□□□□ 0.41
RNF4-213ENST00000509388 PDE4BQ07343 736 aa17.63■□□□□ 0.41
RNF4-213ENST00000509388 RBM8AQ9Y5S9 174 aaKnown RBP17.63■□□□□ 0.41
RNF4-213ENST00000509388 TMEM88BA6NKF7 163 aa17.62■□□□□ 0.41
RNF4-213ENST00000509388 USP2O75604 605 aaPredicted RBP17.62■□□□□ 0.41
RNF4-213ENST00000509388 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
RNF4-213ENST00000509388 CST9Q5W186 159 aa17.62■□□□□ 0.41
RNF4-213ENST00000509388 DYNLL2Q96FJ2 89 aa17.62■□□□□ 0.41
RNF4-213ENST00000509388 WRNIP1Q96S55 665 aa17.62■□□□□ 0.41
RNF4-213ENST00000509388 RNF41Q9H4P4 317 aaPredicted RBP17.62■□□□□ 0.41
RNF4-213ENST00000509388 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
RNF4-213ENST00000509388 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.62■□□□□ 0.41
RNF4-213ENST00000509388 ABT1Q9ULW3 272 aaKnown RBP17.62■□□□□ 0.41
RNF4-213ENST00000509388 FZD1Q9UP38 647 aa17.62■□□□□ 0.41
RNF4-213ENST00000509388 UBE2Q2LH0YL09 131 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 CDK8P49336 464 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 APLP1P51693 650 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 MAP3K9P80192 1104 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 MAP3K10Q02779 954 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 CTDSPL2Q05D32 466 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
RNF4-213ENST00000509388 C16orf86Q6ZW13 317 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 MOB2Q70IA6 237 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 METTL16Q86W50 562 aaKnown RBP17.61■□□□□ 0.41
RNF4-213ENST00000509388 ZNF444Q8N0Y2 327 aaPredicted RBP17.61■□□□□ 0.41
RNF4-213ENST00000509388 KLRG1Q96E93 195 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 ANAPC4Q9UJX5 808 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 CSADQ9Y600 493 aa17.61■□□□□ 0.41
RNF4-213ENST00000509388 SLURP2P0DP57 97 aa17.6■□□□□ 0.41
RNF4-213ENST00000509388 MCCP23508 829 aa17.6■□□□□ 0.41
RNF4-213ENST00000509388 EVX2Q03828 476 aa17.6■□□□□ 0.41
RNF4-213ENST00000509388 GABPAQ06546 454 aa17.6■□□□□ 0.41
RNF4-213ENST00000509388 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
RNF4-213ENST00000509388 ANKRD13AQ8IZ07 590 aa17.6■□□□□ 0.41
RNF4-213ENST00000509388 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
RNF4-213ENST00000509388 POLR2AP24928 1970 aaKnown RBP17.6■□□□□ 0.41
RNF4-213ENST00000509388 SMIM22K7EJ46 135 aa17.59■□□□□ 0.41
RNF4-213ENST00000509388 MPHOSPH10O00566 681 aaKnown RBP17.59■□□□□ 0.41
RNF4-213ENST00000509388 EPB41L2O43491 1005 aaKnown RBP17.59■□□□□ 0.41
RNF4-213ENST00000509388 CTNND1O60716 968 aaKnown RBP17.59■□□□□ 0.41
RNF4-213ENST00000509388 ZKSCAN1P17029 563 aaPredicted RBP17.59■□□□□ 0.41
RNF4-213ENST00000509388 HUNKP57058 714 aa17.59■□□□□ 0.41
RNF4-213ENST00000509388 TRDNQ13061 729 aa17.59■□□□□ 0.41
RNF4-213ENST00000509388 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
RNF4-213ENST00000509388 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
RNF4-213ENST00000509388 RRP12Q5JTH9 1297 aaKnown RBP17.59■□□□□ 0.41
RNF4-213ENST00000509388 AKNAD1Q5T1N1 836 aa17.59■□□□□ 0.41
RNF4-213ENST00000509388 SLC44A5Q8NCS7 719 aa17.59■□□□□ 0.41
RNF4-213ENST00000509388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.59■□□□□ 0.41
RNF4-213ENST00000509388 PICK1Q9NRD5 415 aa17.59■□□□□ 0.41
RNF4-213ENST00000509388 SSC5DA1L4H1 1573 aa17.58■□□□□ 0.41
RNF4-213ENST00000509388 UNCXA6NJT0 531 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 PRDM1O75626 825 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 PCP11498 1178 aaKnown RBP17.58■□□□□ 0.4
RNF4-213ENST00000509388 SHMT1P34896 483 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 C1QTNF8P60827 252 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 CREB3L3Q68CJ9 461 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 TATDN1Q6P1N9 297 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 ZKSCAN4Q969J2 545 aaPredicted RBP17.58■□□□□ 0.4
RNF4-213ENST00000509388 SLC10A4Q96EP9 437 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 CCDC17Q96LX7 622 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 DNAJC18Q9H819 358 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 NAV1Q8NEY1 1877 aa17.58■□□□□ 0.4
RNF4-213ENST00000509388 ROBO3Q96MS0 1386 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 PHF20L1A8MW92 1017 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 GDF11O95390 407 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 CYP21A2P08686 494 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 INPP5BP32019 993 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 CAP2P40123 477 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 NECTIN1Q15223 517 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 ABCB5Q2M3G0 1257 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 USP26Q9BXU7 913 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 UPF2Q9HAU5 1272 aaKnown RBP17.57■□□□□ 0.4
RNF4-213ENST00000509388 CREBZFQ9NS37 354 aa17.57■□□□□ 0.4
RNF4-213ENST00000509388 FOCADQ5VW36 1801 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 SLC27A2O14975 620 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 RANBP6O60518 1105 aaKnown RBP17.56■□□□□ 0.4
RNF4-213ENST00000509388 ASNSP08243 561 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 LDLRAD1Q5T700 205 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
RNF4-213ENST00000509388 RALYLQ86SE5 291 aaKnown RBP17.56■□□□□ 0.4
RNF4-213ENST00000509388 SAPCD2Q86UD0 394 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 SCYL3Q8IZE3 742 aa17.56■□□□□ 0.4
RNF4-213ENST00000509388 STAG1Q8WVM7 1258 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms