RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 SLURP2P0DP57 97 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 MSX1P28360 303 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 LMOD1P29536 600 aaPredicted RBP9.6□□□□□ -0.87
CCSER1-208ENST00000509109 EIF6P56537 245 aaKnown RBP9.6□□□□□ -0.87
CCSER1-208ENST00000509109 AIMP1Q12904 312 aaKnown RBP9.6□□□□□ -0.87
CCSER1-208ENST00000509109 SLC10A5Q5PT55 438 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 TMC4Q7Z404 712 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 SYNE4Q8N205 404 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 JMYQ8N9B5 988 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 SUPT20HQ8NEM7 779 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 TRERF1Q96PN7 1200 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 TAF1DQ9H5J8 278 aaPredicted RBP9.6□□□□□ -0.87
CCSER1-208ENST00000509109 HYPKQ9NX55 129 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 CHPF2Q9P2E5 772 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 TRMT112Q9UI30 125 aaKnown RBP9.6□□□□□ -0.87
CCSER1-208ENST00000509109 ADAMTSL1Q8N6G6 1762 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 FZD9O00144 591 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 HSP90B1P14625 803 aaKnown RBP9.59□□□□□ -0.87
CCSER1-208ENST00000509109 ZEB1P37275 1124 aaPredicted RBP9.59□□□□□ -0.87
CCSER1-208ENST00000509109 GNAI1P63096 354 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 HTRA3P83110 453 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 SRSF11Q05519 484 aaKnown RBP9.59□□□□□ -0.87
CCSER1-208ENST00000509109 TCIRG1Q13488 830 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 LYPD4Q6UWN0 246 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 OLFM4Q6UX06 510 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 DDX46Q7L014 1031 aaKnown RBP9.59□□□□□ -0.87
CCSER1-208ENST00000509109 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 NIM1KQ8IY84 436 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 LARGE2Q8N3Y3 721 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCSER1-208ENST00000509109 PLBD2Q8NHP8 589 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 MBIPQ9NS73 344 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 IFT57Q9NWB7 429 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 ATP6V0A2Q9Y487 856 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 USP3Q9Y6I4 520 aa9.59□□□□□ -0.87
CCSER1-208ENST00000509109 ABCC4O15439 1325 aa9.58□□□□□ -0.88
CCSER1-208ENST00000509109 LOC100996750A0A140TA64 210 aa9.58□□□□□ -0.88
CCSER1-208ENST00000509109 BBOX1O75936 387 aa9.58□□□□□ -0.88
CCSER1-208ENST00000509109 EPHX2P34913 555 aa9.58□□□□□ -0.88
CCSER1-208ENST00000509109 EAPPQ56P03 285 aaPredicted RBP9.58□□□□□ -0.88
CCSER1-208ENST00000509109 AIDAQ96BJ3 306 aa9.58□□□□□ -0.88
CCSER1-208ENST00000509109 KRTAP4-6Q9BYQ5 205 aa9.58□□□□□ -0.88
CCSER1-208ENST00000509109 PPIP5K2O43314 1243 aa9.57□□□□□ -0.88
CCSER1-208ENST00000509109 KRT24Q2M2I5 525 aa9.57□□□□□ -0.88
CCSER1-208ENST00000509109 DUSP27Q5VZP5 1158 aa9.57□□□□□ -0.88
CCSER1-208ENST00000509109 DPP8Q6V1X1 898 aaPredicted RBP9.57□□□□□ -0.88
CCSER1-208ENST00000509109 PGBD3Q8N328 593 aa9.57□□□□□ -0.88
CCSER1-208ENST00000509109 GJA3Q9Y6H8 435 aa9.57□□□□□ -0.88
CCSER1-208ENST00000509109 COL4A5P29400 1685 aa9.57□□□□□ -0.88
CCSER1-208ENST00000509109 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 USP17L3A6NCW0 530 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 USP17L4A6NCW7 530 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 A6NJY4 79 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 APAF1O14727 1248 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 TCERG1O14776 1098 aaKnown RBP9.56□□□□□ -0.88
CCSER1-208ENST00000509109 LZTS3O60299 673 aaPredicted RBP9.56□□□□□ -0.88
CCSER1-208ENST00000509109 DDX58O95786 925 aaKnown RBP9.56□□□□□ -0.88
CCSER1-208ENST00000509109 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
CCSER1-208ENST00000509109 GRAPQ13588 217 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 USP17L2Q6R6M4 530 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 USP17L1Q7RTZ2 530 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 SP8Q8IXZ3 490 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 GRAPLQ8TC17 118 aaPredicted RBP9.56□□□□□ -0.88
CCSER1-208ENST00000509109 GLMNQ92990 594 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 NIFKQ9BYG3 293 aaKnown RBP9.56□□□□□ -0.88
CCSER1-208ENST00000509109 PASKQ96RG2 1323 aa9.56□□□□□ -0.88
CCSER1-208ENST00000509109 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
CCSER1-208ENST00000509109 MX2P20592 715 aa9.55□□□□□ -0.88
CCSER1-208ENST00000509109 ISCA1Q9BUE6 129 aa9.55□□□□□ -0.88
CCSER1-208ENST00000509109 RTFDC1Q9BY42 306 aaPredicted RBP9.55□□□□□ -0.88
CCSER1-208ENST00000509109 ZNF358Q9NW07 568 aa9.55□□□□□ -0.88
CCSER1-208ENST00000509109 ZNRF3Q9ULT6 936 aa9.55□□□□□ -0.88
CCSER1-208ENST00000509109 MYH3P11055 1940 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 LTBP1Q14766 1721 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 CNTNAP1P78357 1384 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 TAF1P21675 1872 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 TRPM7Q96QT4 1865 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 TMEM88BA6NKF7 163 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 ATP9BO43861 1147 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 CELA2BP08218 269 aaPredicted RBP9.54□□□□□ -0.88
CCSER1-208ENST00000509109 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 TRIM28Q13263 835 aaKnown RBP9.54□□□□□ -0.88
CCSER1-208ENST00000509109 TNIP1Q15025 636 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 MTFR1Q15390 333 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 AOC3Q16853 763 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 CCDC30Q5VVM6 783 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 USP50Q70EL3 339 aaPredicted RBP9.54□□□□□ -0.88
CCSER1-208ENST00000509109 IQSEC3Q9UPP2 1182 aaPredicted RBP9.54□□□□□ -0.88
CCSER1-208ENST00000509109 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 DUOX1Q9NRD9 1551 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 CACNA1FO60840 1977 aa9.54□□□□□ -0.88
CCSER1-208ENST00000509109 CDK2AP1O14519 115 aa9.53□□□□□ -0.88
CCSER1-208ENST00000509109 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
CCSER1-208ENST00000509109 BACH1O14867 736 aa9.53□□□□□ -0.88
CCSER1-208ENST00000509109 ARHGEF15O94989 841 aa9.53□□□□□ -0.88
CCSER1-208ENST00000509109 UBAP2LQ14157 1087 aaKnown RBP9.53□□□□□ -0.88
CCSER1-208ENST00000509109 SF3B3Q15393 1217 aaKnown RBP9.53□□□□□ -0.88
CCSER1-208ENST00000509109 CCDC27Q2M243 656 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms