RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 RRP1P56182 461 aaKnown RBP22.64■■□□□ 1.21
UBE3D-207ENST00000509102 KIF22Q14807 665 aa22.64■■□□□ 1.21
UBE3D-207ENST00000509102 MIGA1Q8NAN2 632 aa22.64■■□□□ 1.21
UBE3D-207ENST00000509102 HPS5Q9UPZ3 1129 aa22.64■■□□□ 1.21
UBE3D-207ENST00000509102 GOLIM4O00461 696 aa22.63■■□□□ 1.21
UBE3D-207ENST00000509102 TLR2O60603 784 aa22.63■■□□□ 1.21
UBE3D-207ENST00000509102 SLC9C2Q5TAH2 1124 aa22.63■■□□□ 1.21
UBE3D-207ENST00000509102 CD99L2Q8TCZ2 262 aa22.63■■□□□ 1.21
UBE3D-207ENST00000509102 TBC1D2Q9BYX2 928 aa22.63■■□□□ 1.21
UBE3D-207ENST00000509102 EFCC1Q9HA90 598 aa22.63■■□□□ 1.21
UBE3D-207ENST00000509102 FAM196BA6NMK8 535 aa22.62■■□□□ 1.21
UBE3D-207ENST00000509102 PDHXO00330 501 aa22.62■■□□□ 1.21
UBE3D-207ENST00000509102 DYNLL1P63167 89 aaKnown RBP22.62■■□□□ 1.21
UBE3D-207ENST00000509102 OTOP1Q7RTM1 612 aa22.62■■□□□ 1.21
UBE3D-207ENST00000509102 FOXP4Q8IVH2 680 aaPredicted RBP22.62■■□□□ 1.21
UBE3D-207ENST00000509102 GPATCH3Q96I76 525 aa22.62■■□□□ 1.21
UBE3D-207ENST00000509102 PARK7Q99497 189 aaKnown RBP22.62■■□□□ 1.21
UBE3D-207ENST00000509102 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.62■■□□□ 1.21
UBE3D-207ENST00000509102 ATP5JP18859 108 aa22.61■■□□□ 1.21
UBE3D-207ENST00000509102 DOCK1Q14185 1865 aa22.61■■□□□ 1.21
UBE3D-207ENST00000509102 PAG1Q9NWQ8 432 aa22.61■■□□□ 1.21
UBE3D-207ENST00000509102 MYO5AQ9Y4I1 1855 aaKnown RBP22.61■■□□□ 1.21
UBE3D-207ENST00000509102 AFG3L2Q9Y4W6 797 aa22.61■■□□□ 1.21
UBE3D-207ENST00000509102 A0A0G2JLL6 359 aaPredicted RBP22.6■■□□□ 1.21
UBE3D-207ENST00000509102 MAGEB6P1A0A0J9YX57 407 aa22.6■■□□□ 1.21
UBE3D-207ENST00000509102 TRIM75PA6NK02 468 aa22.6■■□□□ 1.21
UBE3D-207ENST00000509102 CAP2P40123 477 aa22.6■■□□□ 1.21
UBE3D-207ENST00000509102 GADL1Q6ZQY3 521 aa22.6■■□□□ 1.21
UBE3D-207ENST00000509102 PRRT2Q7Z6L0 340 aaPredicted RBP22.6■■□□□ 1.21
UBE3D-207ENST00000509102 BOLA2Q9H3K6 86 aa22.6■■□□□ 1.21
UBE3D-207ENST00000509102 AS3MTQ9HBK9 375 aa22.6■■□□□ 1.21
UBE3D-207ENST00000509102 SAP30BPQ9UHR5 308 aaKnown RBP22.6■■□□□ 1.21
UBE3D-207ENST00000509102 PALD1Q9ULE6 856 aa22.6■■□□□ 1.21
UBE3D-207ENST00000509102 SLURP2P0DP57 97 aa22.59■■□□□ 1.21
UBE3D-207ENST00000509102 PDE6AP16499 860 aa22.59■■□□□ 1.21
UBE3D-207ENST00000509102 CRNKL1Q9BZJ0 848 aaKnown RBP22.59■■□□□ 1.21
UBE3D-207ENST00000509102 DCTPP1Q9H773 170 aa22.59■■□□□ 1.21
UBE3D-207ENST00000509102 ASNSP08243 561 aa22.58■■□□□ 1.21
UBE3D-207ENST00000509102 TTC6Q86TZ1 520 aa22.58■■□□□ 1.21
UBE3D-207ENST00000509102 HAUS7Q99871 368 aa22.58■■□□□ 1.21
UBE3D-207ENST00000509102 GINM1Q9NU53 330 aa22.58■■□□□ 1.21
UBE3D-207ENST00000509102 FOCADQ5VW36 1801 aa22.57■■□□□ 1.2
UBE3D-207ENST00000509102 USP17L5A8MUK1 530 aa22.57■■□□□ 1.2
UBE3D-207ENST00000509102 SMARCA5O60264 1052 aaPredicted RBP22.57■■□□□ 1.2
UBE3D-207ENST00000509102 ZNF280CQ8ND82 737 aa22.57■■□□□ 1.2
UBE3D-207ENST00000509102 ZBTB47Q9UFB7 747 aaPredicted RBP22.57■■□□□ 1.2
UBE3D-207ENST00000509102 SLC45A1Q9Y2W3 748 aa22.57■■□□□ 1.2
UBE3D-207ENST00000509102 ZNF532Q9HCE3 1301 aa22.57■■□□□ 1.2
UBE3D-207ENST00000509102 ZSCAN25Q6NSZ9 544 aa22.56■■□□□ 1.2
UBE3D-207ENST00000509102 ECHDC1Q9NTX5 307 aa22.56■■□□□ 1.2
UBE3D-207ENST00000509102 PTPN22Q9Y2R2 807 aa22.56■■□□□ 1.2
UBE3D-207ENST00000509102 GNRH1P01148 92 aa22.55■■□□□ 1.2
UBE3D-207ENST00000509102 LACTBP83111 547 aaPredicted RBP22.55■■□□□ 1.2
UBE3D-207ENST00000509102 MLLT1Q03111 559 aaPredicted RBP22.55■■□□□ 1.2
UBE3D-207ENST00000509102 SPP2Q13103 211 aa22.55■■□□□ 1.2
UBE3D-207ENST00000509102 MOGSQ13724 837 aa22.55■■□□□ 1.2
UBE3D-207ENST00000509102 METTL16Q86W50 562 aaKnown RBP22.55■■□□□ 1.2
UBE3D-207ENST00000509102 RIOK1Q9BRS2 568 aaKnown RBP22.55■■□□□ 1.2
UBE3D-207ENST00000509102 CPA4Q9UI42 421 aa22.55■■□□□ 1.2
UBE3D-207ENST00000509102 PNMA3Q9UL41 463 aa22.55■■□□□ 1.2
UBE3D-207ENST00000509102 CDK5RAP2Q96SN8 1893 aa22.55■■□□□ 1.2
UBE3D-207ENST00000509102 POLR3DP05423 398 aaPredicted RBP22.54■■□□□ 1.2
UBE3D-207ENST00000509102 RGS19P49795 217 aa22.54■■□□□ 1.2
UBE3D-207ENST00000509102 PABPC4Q13310 644 aaKnown RBP eCLIP22.54■■□□□ 1.2
UBE3D-207ENST00000509102 SLC4A8Q2Y0W8 1093 aa22.54■■□□□ 1.2
UBE3D-207ENST00000509102 GPAT2Q6NUI2 795 aa22.54■■□□□ 1.2
UBE3D-207ENST00000509102 C17orf99Q6UX52 265 aa22.54■■□□□ 1.2
UBE3D-207ENST00000509102 PROCA1Q8NCQ7 364 aaPredicted RBP22.54■■□□□ 1.2
UBE3D-207ENST00000509102 SMCR8Q8TEV9 937 aaPredicted RBP22.54■■□□□ 1.2
UBE3D-207ENST00000509102 EDC3Q96F86 508 aaKnown RBP22.54■■□□□ 1.2
UBE3D-207ENST00000509102 EHD4Q9H223 541 aa22.54■■□□□ 1.2
UBE3D-207ENST00000509102 SERPINB13Q9UIV8 391 aa22.54■■□□□ 1.2
UBE3D-207ENST00000509102 AGTPBP1Q9UPW5 1226 aa22.54■■□□□ 1.2
UBE3D-207ENST00000509102 SOX10P56693 466 aa22.53■■□□□ 1.2
UBE3D-207ENST00000509102 CCDC84Q86UT8 332 aaPredicted RBP22.53■■□□□ 1.2
UBE3D-207ENST00000509102 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.53■■□□□ 1.2
UBE3D-207ENST00000509102 CYP2C8P10632 490 aa22.52■■□□□ 1.2
UBE3D-207ENST00000509102 ADD2P35612 726 aa22.52■■□□□ 1.2
UBE3D-207ENST00000509102 DDRGK1Q96HY6 314 aa22.52■■□□□ 1.2
UBE3D-207ENST00000509102 PCDHB15Q9Y5E8 787 aa22.52■■□□□ 1.2
UBE3D-207ENST00000509102 ATAD5Q96QE3 1844 aa22.52■■□□□ 1.2
UBE3D-207ENST00000509102 MYH1P12882 1939 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 TCRBV5S4A2TA0A5A2 114 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 GDF11O95390 407 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 HOXD10P28358 340 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 PRMT2P55345 433 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 NBPF11Q86T75 865 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 AMOTL1Q8IY63 956 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 CRBNQ96SW2 442 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 WDR18Q9BV38 432 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 DNAJC18Q9H819 358 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 MCM9Q9NXL9 1143 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 TMOD4Q9NZQ9 345 aa22.51■■□□□ 1.19
UBE3D-207ENST00000509102 FMNL1O95466 1100 aaPredicted RBP22.5■■□□□ 1.19
UBE3D-207ENST00000509102 HMGCS2P54868 508 aa22.5■■□□□ 1.19
UBE3D-207ENST00000509102 AAMPQ13685 434 aa22.5■■□□□ 1.19
UBE3D-207ENST00000509102 RRP1BQ14684 758 aaKnown RBP22.5■■□□□ 1.19
UBE3D-207ENST00000509102 UBE3CQ15386 1083 aa22.5■■□□□ 1.19
UBE3D-207ENST00000509102 ZBTB21Q9ULJ3 1066 aa22.5■■□□□ 1.19
UBE3D-207ENST00000509102 ADGRA2Q96PE1 1338 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms