RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 HOXD10P28358 340 aa15.3■□□□□ 0.04
PDPN-208ENST00000509009 CAP2P40123 477 aa15.3■□□□□ 0.04
PDPN-208ENST00000509009 PRPF38BQ5VTL8 546 aaKnown RBP15.3■□□□□ 0.04
PDPN-208ENST00000509009 PI4KBQ9UBF8 816 aa15.3■□□□□ 0.04
PDPN-208ENST00000509009 SRRDQ9UH36 339 aa15.3■□□□□ 0.04
PDPN-208ENST00000509009 EXOC6BQ9Y2D4 811 aa15.3■□□□□ 0.04
PDPN-208ENST00000509009 SLC45A1Q9Y2W3 748 aa15.3■□□□□ 0.04
PDPN-208ENST00000509009 OSBPP22059 807 aa15.29■□□□□ 0.04
PDPN-208ENST00000509009 SPP2Q13103 211 aa15.29■□□□□ 0.04
PDPN-208ENST00000509009 FOXP4Q8IVH2 680 aaPredicted RBP15.29■□□□□ 0.04
PDPN-208ENST00000509009 SH3TC2Q8TF17 1288 aa15.29■□□□□ 0.04
PDPN-208ENST00000509009 TGFBRAP1Q8WUH2 860 aa15.29■□□□□ 0.04
PDPN-208ENST00000509009 DHX36Q9H2U1 1008 aaKnown RBP15.29■□□□□ 0.04
PDPN-208ENST00000509009 HERC5Q9UII4 1024 aaKnown RBP15.29■□□□□ 0.04
PDPN-208ENST00000509009 COL2A1P02458 1487 aaPredicted RBP15.28■□□□□ 0.04
PDPN-208ENST00000509009 CYP7A1P22680 504 aa15.28■□□□□ 0.04
PDPN-208ENST00000509009 DYNLL1P63167 89 aaKnown RBP15.28■□□□□ 0.04
PDPN-208ENST00000509009 METTL16Q86W50 562 aaKnown RBP15.28■□□□□ 0.04
PDPN-208ENST00000509009 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
PDPN-208ENST00000509009 MAPKAPK5Q8IW41 473 aa15.28■□□□□ 0.04
PDPN-208ENST00000509009 USP17L5A8MUK1 530 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 MYCP01106 439 aaPredicted RBP15.27■□□□□ 0.04
PDPN-208ENST00000509009 SLC4A8Q2Y0W8 1093 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 AACSQ86V21 672 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 RPAP2Q8IXW5 612 aaPredicted RBP15.27■□□□□ 0.04
PDPN-208ENST00000509009 ZNF280CQ8ND82 737 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 ZBTB40Q9NUA8 1239 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 PALD1Q9ULE6 856 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 AGTPBP1Q9UPW5 1226 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 NDUFB9Q9Y6M9 179 aa15.27■□□□□ 0.04
PDPN-208ENST00000509009 DOCK2Q92608 1830 aa15.27■□□□□ 0.03
PDPN-208ENST00000509009 MKI67P46013 3256 aaKnown RBP15.27■□□□□ 0.03
PDPN-208ENST00000509009 FLT1P17948 1338 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
PDPN-208ENST00000509009 FCGRTP55899 365 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 JAG1P78504 1218 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 TREML2Q5T2D2 321 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 SIRT2Q8IXJ6 389 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 PROCA1Q8NCQ7 364 aaPredicted RBP15.26■□□□□ 0.03
PDPN-208ENST00000509009 RHPN1Q8TCX5 695 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 TBC1D2Q9BYX2 928 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 ANTXR1Q9H6X2 564 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 IL1RAPL2Q9NP60 686 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 COG6Q9Y2V7 657 aa15.26■□□□□ 0.03
PDPN-208ENST00000509009 MYPNQ86TC9 1320 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 SLC34A2O95436 690 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 GRK4P32298 578 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 SH3D19Q5HYK7 790 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 MAGEB6Q8N7X4 407 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 WDR18Q9BV38 432 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 DNAJC18Q9H819 358 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 SAP30BPQ9UHR5 308 aaKnown RBP15.25■□□□□ 0.03
PDPN-208ENST00000509009 DDX19BQ9UMR2 479 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 GABRQQ9UN88 632 aa15.25■□□□□ 0.03
PDPN-208ENST00000509009 ZSWIM8A7E2V4 1837 aa15.24■□□□□ 0.03
PDPN-208ENST00000509009 HMGCS2P54868 508 aa15.24■□□□□ 0.03
PDPN-208ENST00000509009 PRKCZQ05513 592 aa15.24■□□□□ 0.03
PDPN-208ENST00000509009 MAP3K12Q12852 859 aa15.24■□□□□ 0.03
PDPN-208ENST00000509009 MTFR1Q15390 333 aa15.24■□□□□ 0.03
PDPN-208ENST00000509009 MIGA1Q8NAN2 632 aa15.24■□□□□ 0.03
PDPN-208ENST00000509009 SMCR8Q8TEV9 937 aaPredicted RBP15.24■□□□□ 0.03
PDPN-208ENST00000509009 RCAN3Q9UKA8 241 aa15.24■□□□□ 0.03
PDPN-208ENST00000509009 ASNSP08243 561 aa15.23■□□□□ 0.03
PDPN-208ENST00000509009 TMED8Q6PL24 325 aaPredicted RBP15.23■□□□□ 0.03
PDPN-208ENST00000509009 CRACR2BQ8N4Y2 399 aaPredicted RBP15.23■□□□□ 0.03
PDPN-208ENST00000509009 ANKRD13CQ8N6S4 541 aa15.23■□□□□ 0.03
PDPN-208ENST00000509009 KIF1BPQ96EK5 621 aa15.23■□□□□ 0.03
PDPN-208ENST00000509009 AS3MTQ9HBK9 375 aa15.23■□□□□ 0.03
PDPN-208ENST00000509009 PHIPQ8WWQ0 1821 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 APBB1O00213 710 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 HMMRO75330 724 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 FLT3LGP49771 235 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 BACE1P56817 501 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 PABPC4Q13310 644 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDPN-208ENST00000509009 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
PDPN-208ENST00000509009 CERS3Q8IU89 383 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 CLASRPQ8N2M8 674 aaKnown RBP15.22■□□□□ 0.03
PDPN-208ENST00000509009 GINM1Q9NU53 330 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 BIN2Q9UBW5 565 aaPredicted RBP15.22■□□□□ 0.03
PDPN-208ENST00000509009 PNMA3Q9UL41 463 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 DOCK1Q14185 1865 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 BRCA2P51587 3418 aa15.22■□□□□ 0.03
PDPN-208ENST00000509009 ADCY3O60266 1144 aa15.21■□□□□ 0.03
PDPN-208ENST00000509009 RAB11FIP3O75154 756 aa15.21■□□□□ 0.03
PDPN-208ENST00000509009 HLA-DOAP06340 250 aa15.21■□□□□ 0.03
PDPN-208ENST00000509009 USP5P45974 858 aa15.21■□□□□ 0.03
PDPN-208ENST00000509009 GCLCP48506 637 aaPredicted RBP15.21■□□□□ 0.03
PDPN-208ENST00000509009 RIOK1Q9BRS2 568 aaKnown RBP15.21■□□□□ 0.03
PDPN-208ENST00000509009 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
PDPN-208ENST00000509009 ASCC2Q9H1I8 757 aaPredicted RBP15.21■□□□□ 0.03
PDPN-208ENST00000509009 CHMP4BQ9H444 224 aaKnown RBP15.21■□□□□ 0.03
PDPN-208ENST00000509009 MYO5AQ9Y4I1 1855 aaKnown RBP15.2■□□□□ 0.02
PDPN-208ENST00000509009 C19orf81C9J6K1 198 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 USP17L10C9JJH3 530 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 TNPO2O14787 897 aaKnown RBP15.2■□□□□ 0.02
PDPN-208ENST00000509009 GDF11O95390 407 aa15.2■□□□□ 0.02
PDPN-208ENST00000509009 IFIT2P09913 472 aaKnown RBP15.2■□□□□ 0.02
PDPN-208ENST00000509009 CCL5P13501 91 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms