RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MORC1Q86VD1 984 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 BRD9Q9H8M2 597 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 FAM196BA6NMK8 535 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 OPLAHO14841 1288 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 SEC24BO95487 1268 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 VDRP11473 427 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 MX2P20592 715 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 CDR1P51861 262 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 G3BP1Q13283 466 aaKnown RBP eCLIP4.5□□□□□ -1.69
NEDD4-209ENST00000508871 PPP2R5CQ13362 524 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 ARID5BQ14865 1188 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 TMEM132EQ6IEE7 984 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 CPLX2Q6PUV4 134 aaKnown RBP4.5□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC149Q6ZUS6 474 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 C11orf74Q86VG3 221 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 PPFIBP1Q86W92 1011 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 RGL4Q8IZJ4 473 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 GAS2L2Q8NHY3 880 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 NKX2-3Q8TAU0 364 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 AIDAQ96BJ3 306 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 SERTAD1Q9UHV2 236 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 ZBTB21Q9ULJ3 1066 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 ATP8A1Q9Y2Q0 1164 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 ZNF521Q96K83 1311 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 RRP9O43818 475 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 TBCAO75347 108 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 CRELD1Q96HD1 420 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ZSCAN31Q96LW9 406 aaPredicted RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 NCAPGQ9BPX3 1015 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 LUC7L2Q9Y383 392 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 PCDHB11Q9Y5F2 797 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 IL16Q14005 1332 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 NFAT5O94916 1531 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 PLCH1Q4KWH8 1693 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 TMEM88BA6NKF7 163 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 VSTM5A8MXK1 200 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 PSMA7O14818 248 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ZEB2O60315 1214 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ABCD1P33897 745 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 EHHADHQ08426 723 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 MRPL28Q13084 256 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 SWI5Q1ZZU3 235 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ARSHQ5FYA8 562 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 NBPF10Q6P3W6 841 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 DDX46Q7L014 1031 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ANKLE2Q86XL3 938 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 N4BP2L2Q92802 583 aaPredicted RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ZWILCHQ9H900 591 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 DIAPH3Q9NSV4 1193 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 LIMCH1Q9UPQ0 1083 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 TTLL13PA6NNM8 815 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 DIAPH1O60610 1272 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 URI1O94763 535 aaPredicted RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 MFSD10Q14728 455 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ANO4Q32M45 955 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 RILPL1Q5EBL4 403 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 RNF20Q5VTR2 975 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 SYAP1Q96A49 352 aaPredicted RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 RWDD1Q9H446 243 aaPredicted RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ARHGEF10O15013 1369 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 COL22A1Q8NFW1 1626 aaPredicted RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 AGR2O95994 175 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ASIC2Q16515 512 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 TTC39BQ5VTQ0 682 aaPredicted RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 PGM2L1Q6PCE3 622 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 IFNL1Q8IU54 200 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC33Q8N5R6 958 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 SLAIN1Q8ND83 568 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 IL17RAQ96F46 866 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 DMRTB1Q96MA1 342 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 FTOQ9C0B1 505 aaKnown RBP eCLIP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC113Q9H0I3 377 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 METTL5Q9NRN9 209 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 HOOK1Q9UJC3 728 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 MOSPD1Q9UJG1 213 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 IL2P60568 153 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC184Q52MB2 194 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 JAKMIP3Q5VZ66 844 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 RAPH1Q70E73 1250 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 TRMT2AQ8IZ69 625 aaKnown RBP4.49□□□□□ -1.69
NEDD4-209ENST00000508871 WDR66Q8TBY9 1149 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 SLC10A4Q96EP9 437 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 TMX1Q9H3N1 280 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 ASAP1Q9ULH1 1129 aa4.49□□□□□ -1.69
NEDD4-209ENST00000508871 SIPA1L3O60292 1781 aaPredicted RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 PKD1L3Q7Z443 1732 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 PQBP1O60828 265 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 PYGMP11217 842 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 FERP16591 822 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 PWP1Q13610 501 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 ZRSR1Q15695 479 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 NBPF6Q5VWK0 638 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 TYW1BQ6NUM6 668 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 NBPF5PQ86XG9 351 aaPredicted RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 NBPF4Q96M43 638 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 CXorf56Q9H5V9 222 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 HMX1Q9NP08 348 aaPredicted RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 ABCF2Q9UG63 623 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 IFIT1P09914 478 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 BDNFP23560 247 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms