RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
CCHCR1-227ENST00000508852 RAET1EQ8TD07 263 aa16.61■□□□□ 0.25
CCHCR1-227ENST00000508852 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
CCHCR1-227ENST00000508852 AGTPBP1Q9UPW5 1226 aa16.61■□□□□ 0.25
CCHCR1-227ENST00000508852 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
CCHCR1-227ENST00000508852 ATAD5Q96QE3 1844 aa16.61■□□□□ 0.25
CCHCR1-227ENST00000508852 MGAMO43451 1857 aa16.61■□□□□ 0.25
CCHCR1-227ENST00000508852 POTEFA5A3E0 1075 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 USP17L5A8MUK1 530 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 CYP2E1P05181 493 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 BCRP11274 1271 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 RLBP1P12271 317 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 CAP2P40123 477 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 CEP85Q6P2H3 762 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 RPAP2Q8IXW5 612 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 TRIM47Q96LD4 638 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 SNRKQ9NRH2 765 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 AATFQ9NY61 560 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 DDX19BQ9UMR2 479 aa16.6■□□□□ 0.25
CCHCR1-227ENST00000508852 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 SLC34A2O95436 690 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 HLA-DOAP06340 250 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 ASNSP08243 561 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 UBXN2AP68543 259 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 CAP1Q01518 475 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 MAP3K12Q12852 859 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 SH3RF3Q8TEJ3 882 aaPredicted RBP16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 ARHGAP39Q9C0H5 1083 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 DBNLQ9UJU6 430 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 MYPNQ86TC9 1320 aa16.59■□□□□ 0.25
CCHCR1-227ENST00000508852 OSBPP22059 807 aa16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 ZAP70P43403 619 aa16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 METTL16Q86W50 562 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 SLAIN1Q8ND83 568 aa16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 EAF2Q96CJ1 260 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 CDK5RAP2Q96SN8 1893 aa16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 CENPFP49454 3210 aa16.58■□□□□ 0.24
CCHCR1-227ENST00000508852 LOC285556D6RIA3 1793 aa16.57■□□□□ 0.24
CCHCR1-227ENST00000508852 FLT1P17948 1338 aa16.57■□□□□ 0.24
CCHCR1-227ENST00000508852 CYP2C8P10632 490 aa16.57■□□□□ 0.24
CCHCR1-227ENST00000508852 GRK4P32298 578 aa16.57■□□□□ 0.24
CCHCR1-227ENST00000508852 CLASRPQ8N2M8 674 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-227ENST00000508852 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
CCHCR1-227ENST00000508852 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
CCHCR1-227ENST00000508852 CCDC8Q9H0W5 538 aaPredicted RBP16.57■□□□□ 0.24
CCHCR1-227ENST00000508852 C19orf81C9J6K1 198 aa16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 EN2P19622 333 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 CYP7A1P22680 504 aa16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 SPP2Q13103 211 aa16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 SH3D19Q5HYK7 790 aa16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 AACSQ86V21 672 aa16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 COA7Q96BR5 231 aa16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 KIF1BPQ96EK5 621 aa16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-227ENST00000508852 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 FAM110CQ1W6H9 321 aa16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 MAPKAPK5Q8IW41 473 aa16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 PANK1Q8TE04 598 aa16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 PXYLP1Q8TE99 480 aa16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 SH3TC2Q8TF17 1288 aa16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 PIH1D3Q9NQM4 214 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 MYH1P12882 1939 aa16.55■□□□□ 0.24
CCHCR1-227ENST00000508852 TNPO2O14787 897 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 USP5P45974 858 aa16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 IRF5Q13568 498 aa16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 TTC6Q86TZ1 520 aa16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 RHPN1Q8TCX5 695 aa16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 GTF3C2Q8WUA4 911 aaPredicted RBP16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 BIN2Q9UBW5 565 aaPredicted RBP16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 TAOK2Q9UL54 1235 aa16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
CCHCR1-227ENST00000508852 IFIT2P09913 472 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-227ENST00000508852 CTGFP29279 349 aa16.53■□□□□ 0.24
CCHCR1-227ENST00000508852 HMGCS2P54868 508 aa16.53■□□□□ 0.24
CCHCR1-227ENST00000508852 BACE1P56817 501 aa16.53■□□□□ 0.24
CCHCR1-227ENST00000508852 PRKCZQ05513 592 aa16.53■□□□□ 0.24
CCHCR1-227ENST00000508852 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
CCHCR1-227ENST00000508852 EHD4Q9H223 541 aa16.53■□□□□ 0.24
CCHCR1-227ENST00000508852 TLR7Q9NYK1 1049 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-227ENST00000508852 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
CCHCR1-227ENST00000508852 USP17L10C9JJH3 530 aa16.52■□□□□ 0.24
CCHCR1-227ENST00000508852 GJB1P08034 283 aa16.52■□□□□ 0.24
CCHCR1-227ENST00000508852 HOXA7P31268 230 aaPredicted RBP16.52■□□□□ 0.24
CCHCR1-227ENST00000508852 ADGRA1Q86SQ6 560 aa16.52■□□□□ 0.24
CCHCR1-227ENST00000508852 ZBTB40Q9NUA8 1239 aa16.52■□□□□ 0.24
CCHCR1-227ENST00000508852 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.24
CCHCR1-227ENST00000508852 PALD1Q9ULE6 856 aa16.52■□□□□ 0.24
CCHCR1-227ENST00000508852 SIPA1L1O43166 1804 aa16.52■□□□□ 0.23
CCHCR1-227ENST00000508852 ADCY3O60266 1144 aa16.51■□□□□ 0.23
CCHCR1-227ENST00000508852 GJA8P48165 433 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms