RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 GIPC2Q8TF65 315 aa9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 SNCAIPQ9Y6H5 919 aa9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 OAS3Q9Y6K5 1087 aaKnown RBP9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 U3KQE9 123 aa9.44□□□□□ -0.9
TOPBP1-206ENST00000508524 RLBP1P12271 317 aa9.43□□□□□ -0.9
TOPBP1-206ENST00000508524 FBRSQ9HAH7 460 aa9.43□□□□□ -0.9
TOPBP1-206ENST00000508524 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
TOPBP1-206ENST00000508524 CCDC39Q9UFE4 941 aa9.43□□□□□ -0.9
TOPBP1-206ENST00000508524 GFRA2O00451 464 aa9.42□□□□□ -0.9
TOPBP1-206ENST00000508524 LMNB1P20700 586 aa9.42□□□□□ -0.9
TOPBP1-206ENST00000508524 VSIG10LQ86VR7 867 aa9.42□□□□□ -0.9
TOPBP1-206ENST00000508524 FAM181AQ8N9Y4 354 aa9.42□□□□□ -0.9
TOPBP1-206ENST00000508524 KCT2Q8NC54 265 aa9.42□□□□□ -0.9
TOPBP1-206ENST00000508524 WNT10AQ9GZT5 417 aa9.42□□□□□ -0.9
TOPBP1-206ENST00000508524 MIR1-1HGQ9H1L0 117 aa9.42□□□□□ -0.9
TOPBP1-206ENST00000508524 CDC37L1Q7L3B6 337 aa9.41□□□□□ -0.9
TOPBP1-206ENST00000508524 ZNF507Q8TCN5 953 aa9.41□□□□□ -0.9
TOPBP1-206ENST00000508524 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
TOPBP1-206ENST00000508524 F6X3S4 739 aa9.4□□□□□ -0.9
TOPBP1-206ENST00000508524 MRPL58Q14197 206 aaKnown RBP9.4□□□□□ -0.9
TOPBP1-206ENST00000508524 NKG7Q16617 165 aa9.4□□□□□ -0.9
TOPBP1-206ENST00000508524 ARMCX6Q7L4S7 300 aa9.4□□□□□ -0.9
TOPBP1-206ENST00000508524 FAM214BQ7L5A3 538 aa9.4□□□□□ -0.9
TOPBP1-206ENST00000508524 ANGEL1Q9UNK9 670 aaKnown RBP9.4□□□□□ -0.9
TOPBP1-206ENST00000508524 SLBPQ14493 270 aaKnown RBP eCLIP9.39□□□□□ -0.91
TOPBP1-206ENST00000508524 ZNF326Q5BKZ1 582 aaKnown RBP9.39□□□□□ -0.91
TOPBP1-206ENST00000508524 HEXIM2Q96MH2 286 aaKnown RBP9.39□□□□□ -0.91
TOPBP1-206ENST00000508524 LRIG2O94898 1065 aa9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 ITGAEP38570 1179 aa9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 CAP2P40123 477 aa9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 OXCT1P55809 520 aa9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 ETF1P62495 437 aaKnown RBP9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 TSNAXIP1Q2TAA8 658 aa9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 PLD6Q8N2A8 252 aaKnown RBP9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 RHOVQ96L33 236 aa9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 MKNK2Q9HBH9 465 aa9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 TACC3Q9Y6A5 838 aa9.38□□□□□ -0.91
TOPBP1-206ENST00000508524 GRK4P32298 578 aa9.37□□□□□ -0.91
TOPBP1-206ENST00000508524 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
TOPBP1-206ENST00000508524 RPL6Q02878 288 aaKnown RBP9.37□□□□□ -0.91
TOPBP1-206ENST00000508524 LMNB2Q03252 620 aa9.37□□□□□ -0.91
TOPBP1-206ENST00000508524 WFDC3Q8IUB2 231 aa9.37□□□□□ -0.91
TOPBP1-206ENST00000508524 NETO1Q8TDF5 533 aa9.37□□□□□ -0.91
TOPBP1-206ENST00000508524 JARID2Q92833 1246 aaPredicted RBP9.37□□□□□ -0.91
TOPBP1-206ENST00000508524 RSRP1Q9BUV0 290 aa9.37□□□□□ -0.91
TOPBP1-206ENST00000508524 EOMESO95936 686 aa9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 PF4P02776 101 aa9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 CAMK2GQ13555 558 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 BNC2Q6ZN30 1099 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 CCDC84Q86UT8 332 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 HID1Q8IV36 788 aa9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 ABI1Q8IZP0 508 aa9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 BCL7CQ8WUZ0 217 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 FBXL18Q96ME1 805 aa9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 TMEM74Q96NL1 305 aa9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 FOXQ1Q9C009 403 aa9.36□□□□□ -0.91
TOPBP1-206ENST00000508524 FAM221AA4D161 298 aa9.35□□□□□ -0.91
TOPBP1-206ENST00000508524 SLITRK5O94991 958 aa9.35□□□□□ -0.91
TOPBP1-206ENST00000508524 CEACAM5P06731 702 aa9.35□□□□□ -0.91
TOPBP1-206ENST00000508524 ZNF16P17020 682 aaPredicted RBP9.35□□□□□ -0.91
TOPBP1-206ENST00000508524 PAK6Q9NQU5 681 aaPredicted RBP9.35□□□□□ -0.91
TOPBP1-206ENST00000508524 PLAGL2Q9UPG8 496 aa9.35□□□□□ -0.91
TOPBP1-206ENST00000508524 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
TOPBP1-206ENST00000508524 CILPO75339 1184 aa9.34□□□□□ -0.91
TOPBP1-206ENST00000508524 GBP2P32456 591 aaPredicted RBP9.34□□□□□ -0.91
TOPBP1-206ENST00000508524 ZNF574Q6ZN55 896 aaPredicted RBP9.34□□□□□ -0.91
TOPBP1-206ENST00000508524 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
TOPBP1-206ENST00000508524 FLCNQ8NFG4 579 aa9.34□□□□□ -0.91
TOPBP1-206ENST00000508524 CST3P01034 146 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 IFI16Q16666 785 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 PRAMEF13Q5VWM6 474 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 RELL1Q8IUW5 271 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 GATAD2BQ8WXI9 593 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 MISP3Q96FF7 219 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 COPRSQ9NQ92 184 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 KBTBD4Q9NVX7 518 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 GTF2IRD1Q9UHL9 959 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 ADGRE2Q9UHX3 823 aa9.33□□□□□ -0.92
TOPBP1-206ENST00000508524 F13A1P00488 732 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 PGRP06401 933 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 ITIH2P19823 946 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 GARTP22102 1010 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 IRAK1P51617 712 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 PWP1Q13610 501 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 MCTP1Q6DN14 999 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 ARHGAP27Q6ZUM4 889 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 STK11IPQ8N1F8 1099 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 MFSD2AQ8NA29 543 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 MIPEPQ99797 713 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 TNKS2Q9H2K2 1166 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 TJP2Q9UDY2 1190 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 SLC5A6Q9Y289 635 aa9.32□□□□□ -0.92
TOPBP1-206ENST00000508524 FAM160A1Q05DH4 1040 aa9.31□□□□□ -0.92
TOPBP1-206ENST00000508524 BNIP3Q12983 259 aa9.31□□□□□ -0.92
TOPBP1-206ENST00000508524 LDLRAD1Q5T700 205 aa9.31□□□□□ -0.92
TOPBP1-206ENST00000508524 SPACA3Q8IXA5 215 aa9.31□□□□□ -0.92
TOPBP1-206ENST00000508524 TP53INP2Q8IXH6 220 aa9.31□□□□□ -0.92
TOPBP1-206ENST00000508524 PRDM5Q9NQX1 630 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms