RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 GRK4P32298 578 aa10.06□□□□□ -0.8
COL6A4P1-204ENST00000508169 ETF1P62495 437 aaKnown RBP10.06□□□□□ -0.8
COL6A4P1-204ENST00000508169 BEND7Q8N7W2 519 aaPredicted RBP10.06□□□□□ -0.8
COL6A4P1-204ENST00000508169 ZSCAN1Q8NBB4 408 aa10.06□□□□□ -0.8
COL6A4P1-204ENST00000508169 WNT10AQ9GZT5 417 aa10.06□□□□□ -0.8
COL6A4P1-204ENST00000508169 ZSWIM4Q9H7M6 989 aa10.06□□□□□ -0.8
COL6A4P1-204ENST00000508169 MEIS3P2A8K0S8 358 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 LORP23490 312 aaPredicted RBP10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 SERINC3Q13530 473 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 RAB33AQ14088 237 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 TMEM201Q5SNT2 666 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 ZBTB37Q5TC79 503 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 TMEM40Q8WWA1 233 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 FANCD2OSQ96PS1 177 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 ATXN3LQ9H3M9 355 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 ANTXR1Q9H6X2 564 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 ACTR10Q9NZ32 417 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 ADAM30Q9UKF2 790 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 CNTNAP5Q8WYK1 1306 aa10.05□□□□□ -0.8
COL6A4P1-204ENST00000508169 U2SURPO15042 1029 aaKnown RBP10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 FANCGO15287 622 aa10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 SOX4Q06945 474 aaPredicted RBP10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 GRIK4Q16099 956 aa10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 FDX2Q6P4F2 183 aa10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 NOP9Q86U38 636 aaKnown RBP10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 AGGF1Q8N302 714 aaeCLIP10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 GMIPQ9P107 970 aa10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 SIRPGQ9P1W8 387 aa10.04□□□□□ -0.8
COL6A4P1-204ENST00000508169 F8W735 103 aaPredicted RBP10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 SPATA31C1P0DKV0 1188 aa10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 ANKRD34AQ69YU3 496 aa10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 OVOS1Q6IE37 1185 aa10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 TMEM130Q8N3G9 435 aa10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 C12orf50Q8NA57 414 aaPredicted RBP10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 RNF214Q8ND24 703 aa10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 TM9SF2Q99805 663 aa10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 PIF1Q9H611 641 aa10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 DISC1Q9NRI5 854 aa10.03□□□□□ -0.8
COL6A4P1-204ENST00000508169 SLC22A31A6NKX4 558 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 TIAF1O95411 115 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 DRD2P14416 443 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 BMS1Q14692 1282 aaKnown RBP10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 NFE2L2Q16236 605 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 RUFY4Q6ZNE9 571 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 DYMQ7RTS9 669 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 C19orf47Q8N9M1 422 aaKnown RBP10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 KLHL3Q9UH77 587 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 USP21Q9UK80 565 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 ADAMTS8Q9UP79 889 aa10.02□□□□□ -0.81
COL6A4P1-204ENST00000508169 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 DNAJA2O60884 412 aa10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 GUCY2CP25092 1073 aa10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 NTF4P34130 210 aa10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 CASP7P55210 303 aa10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 TTLL4Q14679 1199 aa10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 PPP2R5EQ16537 467 aa10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 ZNF507Q8TCN5 953 aa10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 ACSF2Q96CM8 615 aaPredicted RBP10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 AKTIPQ9H8T0 292 aa10.01□□□□□ -0.81
COL6A4P1-204ENST00000508169 GIMAP6Q6P9H5 292 aa10□□□□□ -0.81
COL6A4P1-204ENST00000508169 NLRC3Q7RTR2 1065 aa10□□□□□ -0.81
COL6A4P1-204ENST00000508169 TAB3Q8N5C8 712 aaPredicted RBP10□□□□□ -0.81
COL6A4P1-204ENST00000508169 MKL1Q969V6 931 aa10□□□□□ -0.81
COL6A4P1-204ENST00000508169 LENG1Q96BZ8 264 aaPredicted RBP10□□□□□ -0.81
COL6A4P1-204ENST00000508169 ATG4CQ96DT6 458 aa10□□□□□ -0.81
COL6A4P1-204ENST00000508169 TNKS2Q9H2K2 1166 aa10□□□□□ -0.81
COL6A4P1-204ENST00000508169 GSX1Q9H4S2 264 aaPredicted RBP10□□□□□ -0.81
COL6A4P1-204ENST00000508169 PIDD1Q9HB75 910 aa10□□□□□ -0.81
COL6A4P1-204ENST00000508169 CDK11AQ9UQ88 783 aaPredicted RBP10□□□□□ -0.81
COL6A4P1-204ENST00000508169 ALX3O95076 343 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 NEFMP07197 916 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 HCLS1P14317 486 aaPredicted RBP9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 NME1P15531 152 aaKnown RBP9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 ASPAP45381 313 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 CDCP2Q5VXM1 449 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 CDC37L1Q7L3B6 337 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 HID1Q8IV36 788 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 KCT2Q8NC54 265 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 C2CD4AQ8NCU7 369 aaPredicted RBP9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 FAM13CQ8NE31 585 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 SCARF2Q96GP6 870 aaPredicted RBP9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 NACC1Q96RE7 527 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 CNNM2Q9H8M5 875 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 TJP2Q9UDY2 1190 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 ACTL7BQ9Y614 415 aa9.99□□□□□ -0.81
COL6A4P1-204ENST00000508169 CHURC1-FNTBB4DL54 471 aa9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 SMARCA5O60264 1052 aaPredicted RBP9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 YARSP54577 528 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 ARSHQ5FYA8 562 aa9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 LARP1BQ659C4 914 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 TTC6Q86TZ1 520 aa9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 MCATQ8IVS2 390 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 CELF2-AS1Q8N7Q2 184 aa9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 MRFAP1L1Q96HT8 127 aa9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 TMEM87BQ96K49 555 aa9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 CEP41Q9BYV8 373 aa9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 FBRSQ9HAH7 460 aa9.98□□□□□ -0.81
COL6A4P1-204ENST00000508169 A0A1W2PQH9 124 aa9.97□□□□□ -0.81
COL6A4P1-204ENST00000508169 C9orf172C9J069 976 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms