RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 ERC1Q8IUD2 1116 aa25.47■■□□□ 1.67
CLDND1-216ENST00000507944 TMEM106CQ9BVX2 250 aa25.47■■□□□ 1.67
CLDND1-216ENST00000507944 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.47■■□□□ 1.67
CLDND1-216ENST00000507944 CTGFP29279 349 aa25.46■■□□□ 1.67
CLDND1-216ENST00000507944 PI4KBQ9UBF8 816 aa25.46■■□□□ 1.67
CLDND1-216ENST00000507944 HOXD10P28358 340 aa25.45■■□□□ 1.66
CLDND1-216ENST00000507944 TGFBRAP1Q8WUH2 860 aa25.45■■□□□ 1.66
CLDND1-216ENST00000507944 TRIM47Q96LD4 638 aa25.45■■□□□ 1.66
CLDND1-216ENST00000507944 DHX36Q9H2U1 1008 aaKnown RBP25.45■■□□□ 1.66
CLDND1-216ENST00000507944 HERC5Q9UII4 1024 aaKnown RBP25.45■■□□□ 1.66
CLDND1-216ENST00000507944 SLC45A1Q9Y2W3 748 aa25.45■■□□□ 1.66
CLDND1-216ENST00000507944 MAST2Q6P0Q8 1798 aa25.44■■□□□ 1.66
CLDND1-216ENST00000507944 RBBP6Q7Z6E9 1792 aaKnown RBP25.44■■□□□ 1.66
CLDND1-216ENST00000507944 FMNL1O95466 1100 aaPredicted RBP25.44■■□□□ 1.66
CLDND1-216ENST00000507944 BCRP11274 1271 aa25.44■■□□□ 1.66
CLDND1-216ENST00000507944 CAP2P40123 477 aa25.44■■□□□ 1.66
CLDND1-216ENST00000507944 HSP90AB4PQ58FF6 505 aa25.44■■□□□ 1.66
CLDND1-216ENST00000507944 AACSQ86V21 672 aa25.44■■□□□ 1.66
CLDND1-216ENST00000507944 MAPKAPK5Q8IW41 473 aa25.44■■□□□ 1.66
CLDND1-216ENST00000507944 SRRDQ9UH36 339 aa25.44■■□□□ 1.66
CLDND1-216ENST00000507944 EN2P19622 333 aaPredicted RBP25.43■■□□□ 1.66
CLDND1-216ENST00000507944 CYP7A1P22680 504 aa25.43■■□□□ 1.66
CLDND1-216ENST00000507944 RRP1BQ14684 758 aaKnown RBP25.43■■□□□ 1.66
CLDND1-216ENST00000507944 PRPF38BQ5VTL8 546 aaKnown RBP25.43■■□□□ 1.66
CLDND1-216ENST00000507944 SH3TC2Q8TF17 1288 aa25.43■■□□□ 1.66
CLDND1-216ENST00000507944 IDH1O75874 414 aaKnown RBP25.42■■□□□ 1.66
CLDND1-216ENST00000507944 OSBPP22059 807 aa25.42■■□□□ 1.66
CLDND1-216ENST00000507944 SPP2Q13103 211 aa25.42■■□□□ 1.66
CLDND1-216ENST00000507944 RPAP2Q8IXW5 612 aaPredicted RBP25.42■■□□□ 1.66
CLDND1-216ENST00000507944 DDX19BQ9UMR2 479 aa25.42■■□□□ 1.66
CLDND1-216ENST00000507944 COG6Q9Y2V7 657 aa25.42■■□□□ 1.66
CLDND1-216ENST00000507944 CDK5RAP2Q96SN8 1893 aa25.42■■□□□ 1.66
CLDND1-216ENST00000507944 FLT1P17948 1338 aa25.41■■□□□ 1.66
CLDND1-216ENST00000507944 DYNLL1P63167 89 aaKnown RBP25.41■■□□□ 1.66
CLDND1-216ENST00000507944 SLC4A8Q2Y0W8 1093 aa25.41■■□□□ 1.66
CLDND1-216ENST00000507944 FOXP4Q8IVH2 680 aaPredicted RBP25.41■■□□□ 1.66
CLDND1-216ENST00000507944 ZNF280CQ8ND82 737 aa25.41■■□□□ 1.66
CLDND1-216ENST00000507944 RHPN1Q8TCX5 695 aa25.41■■□□□ 1.66
CLDND1-216ENST00000507944 TBC1D2Q9BYX2 928 aa25.41■■□□□ 1.66
CLDND1-216ENST00000507944 IL1RAPL2Q9NP60 686 aa25.41■■□□□ 1.66
CLDND1-216ENST00000507944 AGTPBP1Q9UPW5 1226 aa25.41■■□□□ 1.66
CLDND1-216ENST00000507944 NDUFB9Q9Y6M9 179 aa25.41■■□□□ 1.66
CLDND1-216ENST00000507944 ATAD5Q96QE3 1844 aa25.4■■□□□ 1.66
CLDND1-216ENST00000507944 USP17L5A8MUK1 530 aa25.4■■□□□ 1.66
CLDND1-216ENST00000507944 MYCP01106 439 aaPredicted RBP25.4■■□□□ 1.66
CLDND1-216ENST00000507944 FCGRTP55899 365 aa25.4■■□□□ 1.66
CLDND1-216ENST00000507944 PALD1Q9ULE6 856 aa25.4■■□□□ 1.66
CLDND1-216ENST00000507944 MAGEB6Q8N7X4 407 aa25.39■■□□□ 1.66
CLDND1-216ENST00000507944 PROCA1Q8NCQ7 364 aaPredicted RBP25.39■■□□□ 1.66
CLDND1-216ENST00000507944 RAET1EQ8TD07 263 aa25.39■■□□□ 1.66
CLDND1-216ENST00000507944 SMCR8Q8TEV9 937 aaPredicted RBP25.39■■□□□ 1.66
CLDND1-216ENST00000507944 ANTXR1Q9H6X2 564 aa25.39■■□□□ 1.66
CLDND1-216ENST00000507944 ZBTB40Q9NUA8 1239 aa25.39■■□□□ 1.66
CLDND1-216ENST00000507944 RCAN3Q9UKA8 241 aa25.39■■□□□ 1.66
CLDND1-216ENST00000507944 FOCADQ5VW36 1801 aa25.39■■□□□ 1.65
CLDND1-216ENST00000507944 MYPNQ86TC9 1320 aa25.38■■□□□ 1.65
CLDND1-216ENST00000507944 MGAMO43451 1857 aa25.38■■□□□ 1.65
CLDND1-216ENST00000507944 SIPA1L1O43166 1804 aa25.38■■□□□ 1.65
CLDND1-216ENST00000507944 HMMRO75330 724 aa25.38■■□□□ 1.65
CLDND1-216ENST00000507944 MAP3K12Q12852 859 aa25.38■■□□□ 1.65
CLDND1-216ENST00000507944 TREML2Q5T2D2 321 aa25.38■■□□□ 1.65
CLDND1-216ENST00000507944 METTL16Q86W50 562 aaKnown RBP25.38■■□□□ 1.65
CLDND1-216ENST00000507944 TRIM34Q9BYJ4 488 aa25.38■■□□□ 1.65
CLDND1-216ENST00000507944 SAP30BPQ9UHR5 308 aaKnown RBP25.38■■□□□ 1.65
CLDND1-216ENST00000507944 SIRT2Q8IXJ6 389 aa25.37■■□□□ 1.65
CLDND1-216ENST00000507944 CLASRPQ8N2M8 674 aaKnown RBP25.37■■□□□ 1.65
CLDND1-216ENST00000507944 CRACR2BQ8N4Y2 399 aaPredicted RBP25.37■■□□□ 1.65
CLDND1-216ENST00000507944 MIGA1Q8NAN2 632 aa25.37■■□□□ 1.65
CLDND1-216ENST00000507944 AS3MTQ9HBK9 375 aa25.37■■□□□ 1.65
CLDND1-216ENST00000507944 PNMA3Q9UL41 463 aa25.37■■□□□ 1.65
CLDND1-216ENST00000507944 DOCK3Q8IZD9 2030 aa25.36■■□□□ 1.65
CLDND1-216ENST00000507944 APBB1O00213 710 aa25.36■■□□□ 1.65
CLDND1-216ENST00000507944 GRK4P32298 578 aa25.36■■□□□ 1.65
CLDND1-216ENST00000507944 HMGCS2P54868 508 aa25.36■■□□□ 1.65
CLDND1-216ENST00000507944 CERS3Q8IU89 383 aa25.36■■□□□ 1.65
CLDND1-216ENST00000507944 KIF1BPQ96EK5 621 aa25.36■■□□□ 1.65
CLDND1-216ENST00000507944 CHMP4BQ9H444 224 aaKnown RBP25.36■■□□□ 1.65
CLDND1-216ENST00000507944 DNAJC18Q9H819 358 aa25.36■■□□□ 1.65
CLDND1-216ENST00000507944 BRCA2P51587 3418 aa25.35■■□□□ 1.65
CLDND1-216ENST00000507944 HLA-DOAP06340 250 aa25.35■■□□□ 1.65
CLDND1-216ENST00000507944 ASNSP08243 561 aa25.35■■□□□ 1.65
CLDND1-216ENST00000507944 PRKCZQ05513 592 aa25.35■■□□□ 1.65
CLDND1-216ENST00000507944 SH3D19Q5HYK7 790 aa25.35■■□□□ 1.65
CLDND1-216ENST00000507944 TMED8Q6PL24 325 aaPredicted RBP25.35■■□□□ 1.65
CLDND1-216ENST00000507944 WDR18Q9BV38 432 aa25.35■■□□□ 1.65
CLDND1-216ENST00000507944 MYH1P12882 1939 aa25.34■■□□□ 1.65
CLDND1-216ENST00000507944 JAG1P78504 1218 aa25.34■■□□□ 1.65
CLDND1-216ENST00000507944 ANKRD13CQ8N6S4 541 aa25.34■■□□□ 1.65
CLDND1-216ENST00000507944 MKI67P46013 3256 aaKnown RBP25.34■■□□□ 1.65
CLDND1-216ENST00000507944 USP5P45974 858 aa25.33■■□□□ 1.65
CLDND1-216ENST00000507944 PABPC4Q13310 644 aaKnown RBP eCLIP25.33■■□□□ 1.65
CLDND1-216ENST00000507944 TTF1Q15361 905 aaPredicted RBP25.33■■□□□ 1.65
CLDND1-216ENST00000507944 MTFR1Q15390 333 aa25.33■■□□□ 1.65
CLDND1-216ENST00000507944 GINM1Q9NU53 330 aa25.33■■□□□ 1.65
CLDND1-216ENST00000507944 GABRQQ9UN88 632 aa25.33■■□□□ 1.65
CLDND1-216ENST00000507944 LOC285556D6RIA3 1793 aa25.32■■□□□ 1.64
CLDND1-216ENST00000507944 RAB11FIP3O75154 756 aa25.32■■□□□ 1.64
CLDND1-216ENST00000507944 GDF11O95390 407 aa25.32■■□□□ 1.64
CLDND1-216ENST00000507944 IFIT2P09913 472 aaKnown RBP25.32■■□□□ 1.64
CLDND1-216ENST00000507944 BCL11AQ9H165 835 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms