RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 IFFO2Q5TF58 517 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 STRIP1Q5VSL9 837 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 CPLX2Q6PUV4 134 aaKnown RBP19.38■□□□□ 0.69
DDX41-207ENST00000507900 SYNE3Q6ZMZ3 975 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 MICU3Q86XE3 530 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 IQCA1Q86XH1 822 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 TEX11Q8IYF3 940 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 STK11IPQ8N1F8 1099 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 ZKSCAN3Q9BRR0 538 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 FAM217BQ9NTX9 383 aaPredicted RBP19.38■□□□□ 0.69
DDX41-207ENST00000507900 CNPY2Q9Y2B0 182 aa19.38■□□□□ 0.69
DDX41-207ENST00000507900 BRCA1P38398 1863 aaKnown RBP19.38■□□□□ 0.69
DDX41-207ENST00000507900 FLT1P17948 1338 aa19.37■□□□□ 0.69
DDX41-207ENST00000507900 STK36Q9NRP7 1315 aa19.37■□□□□ 0.69
DDX41-207ENST00000507900 ECE2O60344 883 aa19.37■□□□□ 0.69
DDX41-207ENST00000507900 RANBP6O60518 1105 aaKnown RBP19.37■□□□□ 0.69
DDX41-207ENST00000507900 KCNA3P22001 575 aa19.37■□□□□ 0.69
DDX41-207ENST00000507900 CDC27P30260 824 aa19.37■□□□□ 0.69
DDX41-207ENST00000507900 HHIPL2Q6UWX4 724 aa19.37■□□□□ 0.69
DDX41-207ENST00000507900 ENAHQ8N8S7 591 aaPredicted RBP19.37■□□□□ 0.69
DDX41-207ENST00000507900 MRIQ9BWK5 157 aa19.37■□□□□ 0.69
DDX41-207ENST00000507900 DBNDD1Q9H9R9 158 aa19.37■□□□□ 0.69
DDX41-207ENST00000507900 ORC3Q9UBD5 711 aaPredicted RBP19.37■□□□□ 0.69
DDX41-207ENST00000507900 TTF2Q9UNY4 1162 aaKnown RBP19.37■□□□□ 0.69
DDX41-207ENST00000507900 DEKP35659 375 aaKnown RBP19.36■□□□□ 0.69
DDX41-207ENST00000507900 DNM1Q05193 864 aaKnown RBP19.36■□□□□ 0.69
DDX41-207ENST00000507900 PPP2R5BQ15173 497 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 FOXD4L6Q3SYB3 417 aaPredicted RBP19.36■□□□□ 0.69
DDX41-207ENST00000507900 CCDC93Q567U6 631 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 FOXD4L3Q6VB84 417 aaPredicted RBP19.36■□□□□ 0.69
DDX41-207ENST00000507900 USP48Q86UV5 1035 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 RAB11FIP4Q86YS3 637 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 ZNF654Q8IZM8 581 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 GPT2Q8TD30 523 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 PRDM1O75626 825 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 ADD1P35611 737 aaKnown RBP19.36■□□□□ 0.69
DDX41-207ENST00000507900 DACT2Q5SW24 774 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 FERMT3Q86UX7 667 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 MAPKAPK5Q8IW41 473 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 RTKN2Q8IZC4 609 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 FBXW7Q969H0 707 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 PSMD1Q99460 953 aa19.36■□□□□ 0.69
DDX41-207ENST00000507900 DPEP1P16444 411 aa19.35■□□□□ 0.69
DDX41-207ENST00000507900 RXRAP19793 462 aa19.35■□□□□ 0.69
DDX41-207ENST00000507900 KRT85P78386 507 aa19.35■□□□□ 0.69
DDX41-207ENST00000507900 HDLBPQ00341 1268 aaKnown RBP19.35■□□□□ 0.69
DDX41-207ENST00000507900 MYL10Q9BUA6 226 aa19.35■□□□□ 0.69
DDX41-207ENST00000507900 MTFR1LQ9H019 292 aa19.35■□□□□ 0.69
DDX41-207ENST00000507900 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
DDX41-207ENST00000507900 ELP1O95163 1332 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 CCDC196A0A1B0GTZ2 297 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 C21orf2O43822 256 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 IFNAR1P17181 557 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 TGFB2P61812 414 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 RTN1Q16799 776 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 AOC3Q16853 763 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 IFIT1BQ5T764 474 aaKnown RBP19.34■□□□□ 0.69
DDX41-207ENST00000507900 TEKT1Q969V4 418 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 MXD3Q9BW11 206 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 GDPD2Q9HCC8 539 aa19.34■□□□□ 0.69
DDX41-207ENST00000507900 USP17L3A6NCW0 530 aa19.33■□□□□ 0.69
DDX41-207ENST00000507900 USP17L4A6NCW7 530 aa19.33■□□□□ 0.69
DDX41-207ENST00000507900 DDAH1O94760 285 aa19.33■□□□□ 0.69
DDX41-207ENST00000507900 POLR3DP05423 398 aaPredicted RBP19.33■□□□□ 0.69
DDX41-207ENST00000507900 USP17L1Q7RTZ2 530 aa19.33■□□□□ 0.69
DDX41-207ENST00000507900 FBXO18Q8NFZ0 1043 aa19.33■□□□□ 0.69
DDX41-207ENST00000507900 C8orf76Q96K31 380 aa19.33■□□□□ 0.69
DDX41-207ENST00000507900 GZF1Q9H116 711 aaPredicted RBP19.33■□□□□ 0.69
DDX41-207ENST00000507900 ZNF287Q9HBT7 754 aa19.33■□□□□ 0.69
DDX41-207ENST00000507900 MYH6P13533 1939 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 F8W031 263 aaPredicted RBP19.32■□□□□ 0.68
DDX41-207ENST00000507900 FMNL1O95466 1100 aaPredicted RBP19.32■□□□□ 0.68
DDX41-207ENST00000507900 CALM1P0DP23 149 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 CALM2P0DP24 149 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 CALM3P0DP25 149 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 PLCD1P51178 756 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 CCDC178Q5BJE1 867 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 C16orf86Q6ZW13 317 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 FANCBQ8NB91 859 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 ANKS1AQ92625 1134 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 ZDHHC15Q96MV8 337 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 KCNQ5Q9NR82 932 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 TCP11L1Q9NUJ3 509 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 TSPY2A6NKD2 308 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 FIBPO43427 364 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
DDX41-207ENST00000507900 IARSP41252 1262 aaKnown RBP19.32■□□□□ 0.68
DDX41-207ENST00000507900 UBE2HP62256 183 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 SOGA3Q5TF21 947 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 ATL3Q6DD88 541 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 CATIPQ7Z7H3 387 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 CCDC144CPQ8IYA2 1237 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 DYNLL2Q96FJ2 89 aa19.32■□□□□ 0.68
DDX41-207ENST00000507900 SCAND2PQ9GZW5 306 aaPredicted RBP19.32■□□□□ 0.68
DDX41-207ENST00000507900 MYH8P13535 1937 aa19.31■□□□□ 0.68
DDX41-207ENST00000507900 PPIP5K2O43314 1243 aa19.31■□□□□ 0.68
DDX41-207ENST00000507900 PPFIA3O75145 1194 aa19.31■□□□□ 0.68
DDX41-207ENST00000507900 WDHD1O75717 1129 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms