RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
RNF4-209ENST00000507784 MCM5P33992 734 aa20.63■□□□□ 0.89
RNF4-209ENST00000507784 TNNI2P48788 182 aa20.63■□□□□ 0.89
RNF4-209ENST00000507784 COL9A3Q14050 684 aaPredicted RBP20.63■□□□□ 0.89
RNF4-209ENST00000507784 Q6ZUG5 572 aa20.63■□□□□ 0.89
RNF4-209ENST00000507784 MB21D2Q8IYB1 491 aaPredicted RBP20.63■□□□□ 0.89
RNF4-209ENST00000507784 TRPM4Q8TD43 1214 aa20.63■□□□□ 0.89
RNF4-209ENST00000507784 FAM151AQ8WW52 585 aa20.63■□□□□ 0.89
RNF4-209ENST00000507784 SNX21Q969T3 373 aa20.63■□□□□ 0.89
RNF4-209ENST00000507784 LRRC2Q9BYS8 371 aa20.63■□□□□ 0.89
RNF4-209ENST00000507784 DHX36Q9H2U1 1008 aaKnown RBP20.63■□□□□ 0.89
RNF4-209ENST00000507784 DDTLA6NHG4 134 aaPredicted RBP20.62■□□□□ 0.89
RNF4-209ENST00000507784 PRC1O43663 620 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 KDM4AO75164 1064 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 CD2BP2O95400 341 aaKnown RBP20.62■□□□□ 0.89
RNF4-209ENST00000507784 PCP11498 1178 aaKnown RBP20.62■□□□□ 0.89
RNF4-209ENST00000507784 AK2P54819 239 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 CYB5R4Q7L1T6 521 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 IL27Q8NEV9 243 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 ESR2Q92731 530 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 LARP6Q9BRS8 491 aaKnown RBP20.62■□□□□ 0.89
RNF4-209ENST00000507784 TRIM34Q9BYJ4 488 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 ADARB2Q9NS39 739 aaKnown RBP20.62■□□□□ 0.89
RNF4-209ENST00000507784 HACL1Q9UJ83 578 aa20.62■□□□□ 0.89
RNF4-209ENST00000507784 ASTN2O75129 1339 aaPredicted RBP20.61■□□□□ 0.89
RNF4-209ENST00000507784 CDK8P49336 464 aa20.61■□□□□ 0.89
RNF4-209ENST00000507784 EXOSC10Q01780 885 aaKnown RBP20.61■□□□□ 0.89
RNF4-209ENST00000507784 ZNF444Q8N0Y2 327 aaPredicted RBP20.61■□□□□ 0.89
RNF4-209ENST00000507784 CRACR2BQ8N4Y2 399 aaPredicted RBP20.61■□□□□ 0.89
RNF4-209ENST00000507784 TTC14Q96N46 770 aa20.61■□□□□ 0.89
RNF4-209ENST00000507784 ZNF287Q9HBT7 754 aa20.61■□□□□ 0.89
RNF4-209ENST00000507784 SCAF8Q9UPN6 1271 aaKnown RBP20.61■□□□□ 0.89
RNF4-209ENST00000507784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.61■□□□□ 0.89
RNF4-209ENST00000507784 ORC4O43929 436 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 MCM2P49736 904 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 FKBP1CQ5VVH2 108 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 C16orf86Q6ZW13 317 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 SH3BP5LQ7L8J4 393 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 SLC44A5Q8NCS7 719 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 NKX2-3Q8TAU0 364 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 IPO9Q96P70 1041 aaKnown RBP20.6■□□□□ 0.89
RNF4-209ENST00000507784 ZSWIM5Q9P217 1185 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 PI4KBQ9UBF8 816 aa20.6■□□□□ 0.89
RNF4-209ENST00000507784 CNTNAP1P78357 1384 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 ROBO3Q96MS0 1386 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 MYH8P13535 1937 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 FGRP09769 529 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 HIRAP54198 1017 aaPredicted RBP20.59■□□□□ 0.89
RNF4-209ENST00000507784 TNFAIP1Q13829 316 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 ANKRD1Q15327 319 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 FAM47AQ5JRC9 791 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 ANGEL2Q5VTE6 544 aaKnown RBP20.59■□□□□ 0.89
RNF4-209ENST00000507784 FAM83AQ86UY5 434 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 L3MBTL3Q96JM7 780 aaPredicted RBP20.59■□□□□ 0.89
RNF4-209ENST00000507784 ZKSCAN3Q9BRR0 538 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 SERPINB13Q9UIV8 391 aa20.59■□□□□ 0.89
RNF4-209ENST00000507784 TSPY2A6NKD2 308 aa20.58■□□□□ 0.89
RNF4-209ENST00000507784 K7ELQ4 463 aaPredicted RBP20.58■□□□□ 0.89
RNF4-209ENST00000507784 ANTXR2P58335 489 aa20.58■□□□□ 0.89
RNF4-209ENST00000507784 FOXP4Q8IVH2 680 aaPredicted RBP20.58■□□□□ 0.89
RNF4-209ENST00000507784 CSRNP1Q96S65 589 aa20.58■□□□□ 0.89
RNF4-209ENST00000507784 TMEM39BQ9GZU3 492 aa20.58■□□□□ 0.89
RNF4-209ENST00000507784 ALDH8A1Q9H2A2 487 aaPredicted RBP20.58■□□□□ 0.89
RNF4-209ENST00000507784 SWAP70Q9UH65 585 aa20.58■□□□□ 0.89
RNF4-209ENST00000507784 ERICH2A1L162 156 aa20.57■□□□□ 0.88
RNF4-209ENST00000507784 IFIT3O14879 490 aaKnown RBP20.57■□□□□ 0.88
RNF4-209ENST00000507784 EPHX2P34913 555 aa20.57■□□□□ 0.88
RNF4-209ENST00000507784 TFAP4Q01664 338 aa20.57■□□□□ 0.88
RNF4-209ENST00000507784 TOB2Q14106 344 aaPredicted RBP20.57■□□□□ 0.88
RNF4-209ENST00000507784 RASA3Q14644 834 aa20.57■□□□□ 0.88
RNF4-209ENST00000507784 APOBEC3FQ8IUX4 373 aaKnown RBP20.57■□□□□ 0.88
RNF4-209ENST00000507784 BRF1Q92994 677 aa20.57■□□□□ 0.88
RNF4-209ENST00000507784 UBAC1Q9BSL1 405 aa20.57■□□□□ 0.88
RNF4-209ENST00000507784 GGA3Q9NZ52 723 aa20.57■□□□□ 0.88
RNF4-209ENST00000507784 NAP1L2Q9ULW6 460 aaPredicted RBP20.57■□□□□ 0.88
RNF4-209ENST00000507784 LIMCH1Q9UPQ0 1083 aa20.57■□□□□ 0.88
RNF4-209ENST00000507784 WDR19Q8NEZ3 1342 aa20.56■□□□□ 0.88
RNF4-209ENST00000507784 GOLGB1Q14789 3259 aaKnown RBP20.56■□□□□ 0.88
RNF4-209ENST00000507784 FAM196BA6NMK8 535 aa20.56■□□□□ 0.88
RNF4-209ENST00000507784 SLURP2P0DP57 97 aa20.56■□□□□ 0.88
RNF4-209ENST00000507784 RASA1P20936 1047 aa20.56■□□□□ 0.88
RNF4-209ENST00000507784 SART3Q15020 963 aaKnown RBP20.56■□□□□ 0.88
RNF4-209ENST00000507784 TMEM67Q5HYA8 995 aa20.56■□□□□ 0.88
RNF4-209ENST00000507784 TMEM87BQ96K49 555 aa20.56■□□□□ 0.88
RNF4-209ENST00000507784 EHD4Q9H223 541 aa20.56■□□□□ 0.88
RNF4-209ENST00000507784 GPHNQ9NQX3 736 aaPredicted RBP20.56■□□□□ 0.88
RNF4-209ENST00000507784 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
RNF4-209ENST00000507784 SIPA1L1O43166 1804 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 IQCA1LA6NCM1 817 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 TSPY3P0CV98 308 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 TSPY8P0CW00 308 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 GABPAQ06546 454 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 APOBRQ0VD83 1088 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 NFXL1Q6ZNB6 911 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 USP50Q70EL3 339 aaPredicted RBP20.55■□□□□ 0.88
RNF4-209ENST00000507784 IQCA1Q86XH1 822 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 SPRYD3Q8NCJ5 442 aa20.55■□□□□ 0.88
RNF4-209ENST00000507784 ZSCAN31Q96LW9 406 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms