RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 CDX2Q99626 313 aaPredicted RBP11.75□□□□□ -0.53
COL6A4P2-203ENST00000507516 ASCC2Q9H1I8 757 aaPredicted RBP11.75□□□□□ -0.53
COL6A4P2-203ENST00000507516 GNL3LQ9NVN8 582 aaKnown RBP11.75□□□□□ -0.53
COL6A4P2-203ENST00000507516 MORF4L1Q9UBU8 362 aa11.75□□□□□ -0.53
COL6A4P2-203ENST00000507516 RFX7Q2KHR2 1363 aa11.75□□□□□ -0.53
COL6A4P2-203ENST00000507516 TTC28Q96AY4 2481 aa11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 ZKSCAN1P17029 563 aaPredicted RBP11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 HMGCS2P54868 508 aa11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 PICALMQ13492 652 aa11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 ZNF280CQ8ND82 737 aa11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 SOCS4Q8WXH5 440 aa11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 DDX4Q9NQI0 724 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 GAKO14976 1311 aa11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 SALL1Q9NSC2 1324 aa11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 DDX60LQ5H9U9 1706 aaKnown RBP11.74□□□□□ -0.53
COL6A4P2-203ENST00000507516 LAMA2P24043 3122 aaKnown RBP11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 EYA2O00167 538 aa11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 CACNB2Q08289 660 aaPredicted RBP11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 PDE3AQ14432 1141 aa11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 EYSQ5T1H1 3165 aa11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 LHX8Q68G74 356 aa11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 SYMPKQ92797 1274 aaKnown RBP11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 DENND2AQ9ULE3 1009 aa11.73□□□□□ -0.53
COL6A4P2-203ENST00000507516 SEMA3EO15041 775 aa11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 TBC1D12O60347 775 aa11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 CCND3P30281 292 aaPredicted RBP11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 IRX3P78415 501 aaPredicted RBP11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 SLF2Q8IX21 1173 aa11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 OSBPL5Q9H0X9 879 aaPredicted RBP11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 SEMA6BQ9H3T3 888 aa11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 PRKAG2Q9UGJ0 569 aa11.72□□□□□ -0.53
COL6A4P2-203ENST00000507516 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 USP17L5A8MUK1 530 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 COL9A1P20849 921 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 RGS2P41220 211 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 BTDP43251 543 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 SH3D19Q5HYK7 790 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 WDR63Q8IWG1 891 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 ZGPATQ8N5A5 531 aaKnown RBP11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 GPRC5AQ8NFJ5 357 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 MYLIPQ8WY64 445 aa11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 SENP6Q9GZR1 1112 aaPredicted RBP11.71□□□□□ -0.53
COL6A4P2-203ENST00000507516 FOSL2P15408 326 aa11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 MAPK4P31152 587 aa11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 PHKA1P46020 1223 aa11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 RFX5P48382 616 aaPredicted RBP11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 CCL14Q16627 93 aa11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 CCAR1Q8IX12 1150 aaKnown RBP11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 USP6NLQ92738 828 aa11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 P2RX7Q99572 595 aaKnown RBP11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 APBA2Q99767 749 aa11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 AS3MTQ9HBK9 375 aa11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
COL6A4P2-203ENST00000507516 PEX10O60683 326 aa11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 CAP2P40123 477 aa11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 HERVK_113P62684 666 aa11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 SHHQ15465 462 aa11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 ATG9AQ7Z3C6 839 aa11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 CEP126Q9P2H0 1117 aa11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 ABCF2Q9UG63 623 aa11.69□□□□□ -0.54
COL6A4P2-203ENST00000507516 DOCK1Q14185 1865 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 MROH7-TTC4A0A0A0MT08 1334 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 DOCK2Q92608 1830 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 MUC3AQ02505 3323 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 HOXA7P31268 230 aaPredicted RBP11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 BACE1P56817 501 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 RHBDL3P58872 404 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 RTP1P59025 263 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 SMAD3P84022 425 aaKnown RBP11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 MTMR2Q13614 643 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 RRP1BQ14684 758 aaKnown RBP11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 C9orf50Q5SZB4 431 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 MORN1Q5T089 497 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 SPTY2D1Q68D10 685 aaPredicted RBP11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 GPR142Q7Z601 462 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 PLEKHH3Q7Z736 793 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 TTYH1Q9H313 450 aaPredicted RBP11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 RBPJLQ9UBG7 517 aa11.68□□□□□ -0.54
COL6A4P2-203ENST00000507516 CDH23Q9H251 3354 aa11.67□□□□□ -0.54
COL6A4P2-203ENST00000507516 GPR75-ASB3A0A0A6YYF3 556 aa11.67□□□□□ -0.54
COL6A4P2-203ENST00000507516 TNFRSF10AO00220 468 aa11.67□□□□□ -0.54
COL6A4P2-203ENST00000507516 ZBTB22O15209 634 aa11.67□□□□□ -0.54
COL6A4P2-203ENST00000507516 ERVK-9P63128 1117 aa11.67□□□□□ -0.54
COL6A4P2-203ENST00000507516 ERVK-24P63145 666 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms