RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
RPS3A-206ENST00000507485 RPAP1Q9BWH6 1393 aaPredicted RBP11.27□□□□□ -0.6
RPS3A-206ENST00000507485 SLURP2P0DP57 97 aa11.27□□□□□ -0.61
RPS3A-206ENST00000507485 HHIPL2Q6UWX4 724 aa11.27□□□□□ -0.61
RPS3A-206ENST00000507485 MIGA2Q7L4E1 593 aa11.27□□□□□ -0.61
RPS3A-206ENST00000507485 FAM83AQ86UY5 434 aa11.27□□□□□ -0.61
RPS3A-206ENST00000507485 ZFPM1Q8IX07 1006 aa11.27□□□□□ -0.61
RPS3A-206ENST00000507485 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
RPS3A-206ENST00000507485 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
RPS3A-206ENST00000507485 SIL1Q9H173 461 aa11.27□□□□□ -0.61
RPS3A-206ENST00000507485 CSADQ9Y600 493 aa11.27□□□□□ -0.61
RPS3A-206ENST00000507485 IFIT1P09914 478 aaKnown RBP11.26□□□□□ -0.61
RPS3A-206ENST00000507485 MOGSQ13724 837 aa11.26□□□□□ -0.61
RPS3A-206ENST00000507485 FKBP1CQ5VVH2 108 aa11.26□□□□□ -0.61
RPS3A-206ENST00000507485 CDC42EP5Q6NZY7 148 aa11.26□□□□□ -0.61
RPS3A-206ENST00000507485 ERO1BQ86YB8 467 aa11.26□□□□□ -0.61
RPS3A-206ENST00000507485 LPIN2Q92539 896 aa11.26□□□□□ -0.61
RPS3A-206ENST00000507485 ZFYVE28Q9HCC9 887 aa11.26□□□□□ -0.61
RPS3A-206ENST00000507485 FAM198AQ9UFP1 575 aa11.26□□□□□ -0.61
RPS3A-206ENST00000507485 PA2G4Q9UQ80 394 aaKnown RBP11.26□□□□□ -0.61
RPS3A-206ENST00000507485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.26□□□□□ -0.61
RPS3A-206ENST00000507485 LCE2BO14633 110 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 MAP3K7O43318 606 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 ADORA1P30542 326 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 ZEB1P37275 1124 aaPredicted RBP11.25□□□□□ -0.61
RPS3A-206ENST00000507485 PHKA1P46020 1223 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 TCP10Q12799 353 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 PPIL2Q13356 520 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 ALDH1L2Q3SY69 923 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 INTS3Q68E01 1043 aaKnown RBP11.25□□□□□ -0.61
RPS3A-206ENST00000507485 ZNF112Q9UJU3 913 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 SUGT1Q9Y2Z0 365 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 MAST3O60307 1309 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 NRG2O14511 850 aaPredicted RBP11.25□□□□□ -0.61
RPS3A-206ENST00000507485 TLR2O60603 784 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 CETPP11597 493 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 SLC5A1P13866 664 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 NBR1Q14596 966 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 ATP2B3Q16720 1220 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.25□□□□□ -0.61
RPS3A-206ENST00000507485 SH3TC2Q8TF17 1288 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 FAM151AQ8WW52 585 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 SMC4Q9NTJ3 1288 aa11.25□□□□□ -0.61
RPS3A-206ENST00000507485 NOB1Q9ULX3 412 aaKnown RBP11.25□□□□□ -0.61
RPS3A-206ENST00000507485 RFX7Q2KHR2 1363 aa11.24□□□□□ -0.61
RPS3A-206ENST00000507485 MYCP01106 439 aaPredicted RBP11.24□□□□□ -0.61
RPS3A-206ENST00000507485 LACTBP83111 547 aaPredicted RBP11.24□□□□□ -0.61
RPS3A-206ENST00000507485 SNAPC2Q13487 334 aa11.24□□□□□ -0.61
RPS3A-206ENST00000507485 C17orf99Q6UX52 265 aa11.24□□□□□ -0.61
RPS3A-206ENST00000507485 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
RPS3A-206ENST00000507485 WDR66Q8TBY9 1149 aa11.24□□□□□ -0.61
RPS3A-206ENST00000507485 MEIS3Q99687 375 aa11.24□□□□□ -0.61
RPS3A-206ENST00000507485 ZNF341Q9BYN7 854 aa11.24□□□□□ -0.61
RPS3A-206ENST00000507485 TMOD2Q9NZR1 351 aa11.24□□□□□ -0.61
RPS3A-206ENST00000507485 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
RPS3A-206ENST00000507485 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 MYH2Q9UKX2 1941 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 CIAO1O76071 339 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
RPS3A-206ENST00000507485 PPATQ06203 517 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 TJAP1Q5JTD0 557 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 ZNF384Q8TF68 577 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 CPA4Q9UI42 421 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 KCNH4Q9UQ05 1017 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
RPS3A-206ENST00000507485 V9GY48 417 aaPredicted RBP11.23□□□□□ -0.61
RPS3A-206ENST00000507485 AK9Q5TCS8 1911 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 PHF20L1A8MW92 1017 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 SLC9C1Q4G0N8 1177 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 HABP4Q5JVS0 413 aaKnown RBP11.22□□□□□ -0.61
RPS3A-206ENST00000507485 DCAF15Q66K64 600 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 PRKD2Q9BZL6 878 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 ZCCHC17Q9NP64 241 aaKnown RBP11.22□□□□□ -0.61
RPS3A-206ENST00000507485 DDX4Q9NQI0 724 aaKnown RBP11.22□□□□□ -0.61
RPS3A-206ENST00000507485 USP40Q9NVE5 1235 aa11.22□□□□□ -0.61
RPS3A-206ENST00000507485 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.22□□□□□ -0.61
RPS3A-206ENST00000507485 PHIPQ8WWQ0 1821 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 PDHXO00330 501 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 LDHBP07195 334 aaKnown RBP11.21□□□□□ -0.61
RPS3A-206ENST00000507485 TIMM10P62072 90 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 RASGRF1Q13972 1273 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 MTFR1Q15390 333 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 NOL9Q5SY16 702 aaKnown RBP11.21□□□□□ -0.61
RPS3A-206ENST00000507485 CCDC102BQ68D86 513 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 ANKRD23Q86SG2 305 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 SHISA4Q96DD7 197 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 CEP126Q9P2H0 1117 aa11.21□□□□□ -0.61
RPS3A-206ENST00000507485 PTPRFP10586 1907 aa11.21□□□□□ -0.62
RPS3A-206ENST00000507485 GAKO14976 1311 aa11.21□□□□□ -0.62
RPS3A-206ENST00000507485 DDTLA6NHG4 134 aaPredicted RBP11.2□□□□□ -0.62
RPS3A-206ENST00000507485 RGS3P49796 1198 aa11.2□□□□□ -0.62
RPS3A-206ENST00000507485 TSR1Q2NL82 804 aaKnown RBP11.2□□□□□ -0.62
RPS3A-206ENST00000507485 CCDC84Q86UT8 332 aaPredicted RBP11.2□□□□□ -0.62
RPS3A-206ENST00000507485 COPRSQ9NQ92 184 aa11.2□□□□□ -0.62
RPS3A-206ENST00000507485 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms