RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 GJC2Q5T442 439 aaPredicted RBP9.2□□□□□ -0.94
VCAN-207ENST00000507162 SLC39A5Q6ZMH5 540 aa9.2□□□□□ -0.94
VCAN-207ENST00000507162 TRIM43Q96BQ3 446 aaPredicted RBP9.2□□□□□ -0.94
VCAN-207ENST00000507162 MRIQ9BWK5 157 aa9.2□□□□□ -0.94
VCAN-207ENST00000507162 PLA2G12BQ9BX93 195 aa9.2□□□□□ -0.94
VCAN-207ENST00000507162 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.2□□□□□ -0.94
VCAN-207ENST00000507162 ARAP2Q8WZ64 1704 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 CACNA1GO43497 2377 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 PHF20L1A8MW92 1017 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 SMIM22K7EJ46 135 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 GPR37L1O60883 481 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 XRCC5P13010 732 aaKnown RBP9.19□□□□□ -0.94
VCAN-207ENST00000507162 KCNQ1P51787 676 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 NFIAQ12857 509 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 ADGRE1Q14246 886 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 AAK1Q2M2I8 961 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 TRIM60Q495X7 471 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 CDC42EP5Q6NZY7 148 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 ZFPM1Q8IX07 1006 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 TBC1D22AQ8WUA7 517 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 UIMC1Q96RL1 719 aa9.19□□□□□ -0.94
VCAN-207ENST00000507162 ASCC2Q9H1I8 757 aaPredicted RBP9.19□□□□□ -0.94
VCAN-207ENST00000507162 CWC22Q9HCG8 908 aaKnown RBP9.19□□□□□ -0.94
VCAN-207ENST00000507162 CXXC1Q9P0U4 656 aaPredicted RBP9.19□□□□□ -0.94
VCAN-207ENST00000507162 GRXCR1A8MXD5 290 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 SLURP2P0DP57 97 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 RGS2P41220 211 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 SPP2Q13103 211 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 PABPC4Q13310 644 aaKnown RBP eCLIP9.18□□□□□ -0.94
VCAN-207ENST00000507162 UBE4AQ14139 1066 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 GCKRQ14397 625 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 MFSD14CQ5VZR4 134 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 HHIPL2Q6UWX4 724 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 ZSCAN29Q8IWY8 852 aaPredicted RBP9.18□□□□□ -0.94
VCAN-207ENST00000507162 CCDC146Q8IYE0 955 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 SOCS4Q8WXH5 440 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 LPAR1Q92633 364 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 FERMT2Q96AC1 680 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 RPAP1Q9BWH6 1393 aaPredicted RBP9.18□□□□□ -0.94
VCAN-207ENST00000507162 PDLIM7Q9NR12 457 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 MBIPQ9NS73 344 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
VCAN-207ENST00000507162 DDX20Q9UHI6 824 aaKnown RBP9.18□□□□□ -0.94
VCAN-207ENST00000507162 MAST3O60307 1309 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 DNM1LO00429 736 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 CTNND1O60716 968 aaKnown RBP9.17□□□□□ -0.94
VCAN-207ENST00000507162 RAG1P15918 1043 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 ITGB8P26012 769 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 PBX2P40425 430 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 HMGCS2P54868 508 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 TLE2Q04725 743 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 CCDC57Q2TAC2 916 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 CCDC30Q5VVM6 783 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 ARRDC4Q8NCT1 418 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 PCGF6Q9BYE7 350 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 C11orf16Q9NQ32 467 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 FAM198AQ9UFP1 575 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 TRIM35Q9UPQ4 493 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 ZDBF2Q9HCK1 2354 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 CHD9Q3L8U1 2897 aa9.17□□□□□ -0.94
VCAN-207ENST00000507162 KBTBD13C9JR72 458 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 ATXN8OSP0DMR3 200 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 ADCYAP1R1P41586 468 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 CASP7P55210 303 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 IRX3P78415 501 aaPredicted RBP9.16□□□□□ -0.94
VCAN-207ENST00000507162 ATP2B2Q01814 1243 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 CAVIN4Q5BKX8 364 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 ANO1Q5XXA6 986 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 LMBR1LQ6UX01 489 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 FBXO33Q7Z6M2 555 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 PLEKHH3Q7Z736 793 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 PROCA1Q8NCQ7 364 aaPredicted RBP9.16□□□□□ -0.94
VCAN-207ENST00000507162 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.94
VCAN-207ENST00000507162 EDC3Q96F86 508 aaKnown RBP9.16□□□□□ -0.94
VCAN-207ENST00000507162 PBX4Q9BYU1 374 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 TACC3Q9Y6A5 838 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 NDUFB9Q9Y6M9 179 aa9.16□□□□□ -0.94
VCAN-207ENST00000507162 MYH3P11055 1940 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 MSCO60682 206 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 MAPK4P31152 587 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 ZEB1P37275 1124 aaPredicted RBP9.15□□□□□ -0.94
VCAN-207ENST00000507162 FOXO4P98177 505 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 NHLH1Q02575 133 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 FPGSQ05932 587 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 Q3C1V9 767 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 MORN1Q5T089 497 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 WDR78Q5VTH9 848 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 GPR142Q7Z601 462 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 C8orf58Q8NAV2 365 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 USP6NLQ92738 828 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 MYH16Q9H6N6 1097 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 TXNRD2Q9NNW7 524 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 FLRT1Q9NZU1 646 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 MORF4L1Q9UBU8 362 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 MSRAQ9UJ68 235 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 DAGLAQ9Y4D2 1042 aa9.15□□□□□ -0.94
VCAN-207ENST00000507162 RGS3P49796 1198 aa9.14□□□□□ -0.95
VCAN-207ENST00000507162 DIXDC1Q155Q3 683 aa9.14□□□□□ -0.95
VCAN-207ENST00000507162 ZNF280CQ8ND82 737 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms