RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 KIAA0100Q14667 2235 aaKnown RBP17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 HLA-DOAP06340 250 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 CAP2P40123 477 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 ZAP70P43403 619 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 PSMC4P43686 418 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 FCGRTP55899 365 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 TTF1Q15361 905 aaPredicted RBP17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 GADL1Q6ZQY3 521 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 SH3RF3Q8TEJ3 882 aaPredicted RBP17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 KIF1BPQ96EK5 621 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 CCDC8Q9H0W5 538 aaPredicted RBP17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 SRRDQ9UH36 339 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 AGTPBP1Q9UPW5 1226 aa17.59■□□□□ 0.41
HMGCS1-203ENST00000507004 USP17L5A8MUK1 530 aa17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 RAB11FIP3O75154 756 aa17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 FMNL1O95466 1100 aaPredicted RBP17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 ASNSP08243 561 aa17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 BCRP11274 1271 aa17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 AACSQ86V21 672 aa17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 ZNF280CQ8ND82 737 aa17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 SMCR8Q8TEV9 937 aaPredicted RBP17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 RBBP6Q7Z6E9 1792 aaKnown RBP17.58■□□□□ 0.4
HMGCS1-203ENST00000507004 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 IDH1O75874 414 aaKnown RBP17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 CAPN2P17655 700 aa17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 CYP7A1P22680 504 aa17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 METTL16Q86W50 562 aaKnown RBP17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 RHPN1Q8TCX5 695 aa17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 RAET1EQ8TD07 263 aa17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 RCAN3Q9UKA8 241 aa17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
HMGCS1-203ENST00000507004 FLT1P17948 1338 aa17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 GCLCP48506 637 aaPredicted RBP17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 SLC4A8Q2Y0W8 1093 aa17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 TGFBRAP1Q8WUH2 860 aa17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 TRIM47Q96LD4 638 aa17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 WDR18Q9BV38 432 aa17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 PIH1D3Q9NQM4 214 aaKnown RBP17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 ZBTB40Q9NUA8 1239 aa17.56■□□□□ 0.4
HMGCS1-203ENST00000507004 MYPNQ86TC9 1320 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 CYP2C8P10632 490 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 OSBPP22059 807 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 CAP1Q01518 475 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 SPP2Q13103 211 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 SH3D19Q5HYK7 790 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 MAPKAPK5Q8IW41 473 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 NKX2-3Q8TAU0 364 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 ARHGAP39Q9C0H5 1083 aa17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 TLR7Q9NYK1 1049 aaKnown RBP17.55■□□□□ 0.4
HMGCS1-203ENST00000507004 POTEFA5A3E0 1075 aa17.54■□□□□ 0.4
HMGCS1-203ENST00000507004 C19orf81C9J6K1 198 aa17.54■□□□□ 0.4
HMGCS1-203ENST00000507004 IFIT2P09913 472 aaKnown RBP17.54■□□□□ 0.4
HMGCS1-203ENST00000507004 UBXN2AP68543 259 aa17.54■□□□□ 0.4
HMGCS1-203ENST00000507004 TTC6Q86TZ1 520 aa17.54■□□□□ 0.4
HMGCS1-203ENST00000507004 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
HMGCS1-203ENST00000507004 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
HMGCS1-203ENST00000507004 PTPRFP10586 1907 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 GRK4P32298 578 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 USP5P45974 858 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 FAM110CQ1W6H9 321 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 ADGRA1Q86SQ6 560 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 MAGEB6Q8N7X4 407 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 SLAIN1Q8ND83 568 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 EHD4Q9H223 541 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 TMOD4Q9NZQ9 345 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
HMGCS1-203ENST00000507004 PHIPQ8WWQ0 1821 aa17.52■□□□□ 0.4
HMGCS1-203ENST00000507004 FAM196BA6NMK8 535 aa17.52■□□□□ 0.4
HMGCS1-203ENST00000507004 GTF3C2Q8WUA4 911 aaPredicted RBP17.52■□□□□ 0.4
HMGCS1-203ENST00000507004 COA7Q96BR5 231 aa17.52■□□□□ 0.4
HMGCS1-203ENST00000507004 TNPO2O14787 897 aaKnown RBP17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 BACE1P56817 501 aa17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 IRF5Q13568 498 aa17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 PXYLP1Q8TE99 480 aa17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 SH3TC2Q8TF17 1288 aa17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 PALD1Q9ULE6 856 aa17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 FOCADQ5VW36 1801 aa17.51■□□□□ 0.39
HMGCS1-203ENST00000507004 USP17L10C9JJH3 530 aa17.5■□□□□ 0.39
HMGCS1-203ENST00000507004 SLURP2P0DP57 97 aa17.5■□□□□ 0.39
HMGCS1-203ENST00000507004 EN2P19622 333 aaPredicted RBP17.5■□□□□ 0.39
HMGCS1-203ENST00000507004 HMGCS2P54868 508 aa17.5■□□□□ 0.39
HMGCS1-203ENST00000507004 CTGFP29279 349 aa17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 HOXA7P31268 230 aaPredicted RBP17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 IRX3P78415 501 aaPredicted RBP17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 PRKCZQ05513 592 aa17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 MIGA1Q8NAN2 632 aa17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 CRNKL1Q9BZJ0 848 aaKnown RBP17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 BIN2Q9UBW5 565 aaPredicted RBP17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 ZBTB21Q9ULJ3 1066 aa17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
HMGCS1-203ENST00000507004 LOC285556D6RIA3 1793 aa17.48■□□□□ 0.39
HMGCS1-203ENST00000507004 MAGEB6P1A0A0J9YX57 407 aa17.48■□□□□ 0.39
HMGCS1-203ENST00000507004 SLC34A2O95436 690 aa17.48■□□□□ 0.39
HMGCS1-203ENST00000507004 GJB1P08034 283 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms