RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 FAM151AQ8WW52 585 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 DYNLL2Q96FJ2 89 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 OSBPL5Q9H0X9 879 aaPredicted RBP10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 MCM9Q9NXL9 1143 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 MKRN1Q9UHC7 482 aaKnown RBP10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 MAST2Q6P0Q8 1798 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 RFX7Q2KHR2 1363 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 PATL2C9JE40 543 aaKnown RBP10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 HIP1O00291 1037 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 TOMM70O94826 608 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 HAND2P61296 217 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 IFNL3Q8IZI9 196 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 SLC44A5Q8NCS7 719 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 CIZ1Q9ULV3 898 aaPredicted RBP10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 ENTPD3O75355 529 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 FGAP02671 866 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 POLR3DP05423 398 aaPredicted RBP10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 PYGBP11216 843 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 TDO2P48775 406 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 SHROOM1Q2M3G4 852 aaPredicted RBP10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 CTR9Q6PD62 1173 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 CSRNP1Q96S65 589 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 ANO2Q9NQ90 1003 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 TACC3Q9Y6A5 838 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 TAF6LQ9Y6J9 622 aa10.57□□□□□ -0.72
SCAMP1-202ENST00000506858 PITPNM2Q9BZ72 1349 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 UBE2Q2LH0YL09 131 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 CELF2O95319 508 aaKnown RBP10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 CHRM1P11229 460 aaPredicted RBP10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 TNNI2P48788 182 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 HTRA3P83110 453 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 RRP1BQ14684 758 aaKnown RBP10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 FKBP1CQ5VVH2 108 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 CST9Q5W186 159 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 FAM83AQ86UY5 434 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 RUFY2Q8WXA3 655 aa10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 LSG1Q9H089 658 aaKnown RBP10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 BAZ2AQ9UIF9 1905 aaKnown RBP10.56□□□□□ -0.72
SCAMP1-202ENST00000506858 IGSF3O75054 1194 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 TNFAIP1Q13829 316 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 TTLL12Q14166 644 aaPredicted RBP10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 C8orf34Q49A92 452 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 NAPBQ9H115 298 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 ATP8A2Q9NTI2 1148 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 METRNQ9UJH8 293 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 SSC5DA1L4H1 1573 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 CDK5RAP2Q96SN8 1893 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 PRDM1O75626 825 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 JAG1P78504 1218 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 C12orf60Q5U649 245 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 TMED8Q6PL24 325 aaPredicted RBP10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 CCDC84Q86UT8 332 aaPredicted RBP10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 DNAJC18Q9H819 358 aa10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 BMP2KQ9NSY1 1161 aaPredicted RBP10.55□□□□□ -0.72
SCAMP1-202ENST00000506858 ECM29Q5VYK3 1845 aa10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 USP2O75604 605 aaPredicted RBP10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 GNAT2P19087 354 aa10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 INPP5BP32019 993 aa10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 CASC1Q6TDU7 716 aa10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 IFNL1Q8IU54 200 aa10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 NACAP1Q9BZK3 213 aa10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 NBPF3Q9H094 633 aa10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 ANGEL1Q9UNK9 670 aaKnown RBP10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 RBM8AQ9Y5S9 174 aaKnown RBP10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 RPAP1Q9BWH6 1393 aaPredicted RBP10.54□□□□□ -0.72
SCAMP1-202ENST00000506858 PASKQ96RG2 1323 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 PPARAQ07869 468 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 IER5LQ5T953 404 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 TICAM2Q86XR7 235 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 TBC1D10CQ8IV04 446 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 CRACR2BQ8N4Y2 399 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 ZKSCAN4Q969J2 545 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 PI4KBQ9UBF8 816 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 ATRNL1Q5VV63 1379 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 CEP350Q5VT06 3117 aa10.53□□□□□ -0.72
SCAMP1-202ENST00000506858 RAD50Q92878 1312 aa10.52□□□□□ -0.72
SCAMP1-202ENST00000506858 GDF11O95390 407 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 ALX1Q15699 326 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 SUPT20HL1Q3ZLR7 823 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 TTC6Q86TZ1 520 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 CERS3Q8IU89 383 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 MAP4K1Q92918 833 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 DSCC1Q9BVC3 393 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 MYH1P12882 1939 aa10.52□□□□□ -0.73
SCAMP1-202ENST00000506858 TTLL13PA6NNM8 815 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 PHF20L1A8MW92 1017 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
SCAMP1-202ENST00000506858 CYP21A2P08686 494 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms