RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 OPTNQ96CV9 577 aa17.76■□□□□ 0.43
DSP-203ENST00000506617 RIOK1Q9BRS2 568 aaKnown RBP17.76■□□□□ 0.43
DSP-203ENST00000506617 ZNF112Q9UJU3 913 aa17.76■□□□□ 0.43
DSP-203ENST00000506617 BAZ2AQ9UIF9 1905 aaKnown RBP17.75■□□□□ 0.43
DSP-203ENST00000506617 MAGEB6P1A0A0J9YX57 407 aa17.75■□□□□ 0.43
DSP-203ENST00000506617 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
DSP-203ENST00000506617 TSKSQ9UJT2 592 aa17.75■□□□□ 0.43
DSP-203ENST00000506617 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
DSP-203ENST00000506617 GNAT2P19087 354 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 CHMLP26374 656 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 USP5P45974 858 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 CTCFP49711 727 aaPredicted RBP17.74■□□□□ 0.43
DSP-203ENST00000506617 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
DSP-203ENST00000506617 MAP3K10Q02779 954 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 MCMDC2Q4G0Z9 681 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 REM2Q8IYK8 340 aaPredicted RBP17.74■□□□□ 0.43
DSP-203ENST00000506617 LCORLQ8N3X6 602 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 OSBP2Q969R2 916 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 PHIPQ8WWQ0 1821 aa17.74■□□□□ 0.43
DSP-203ENST00000506617 RAD50Q92878 1312 aa17.73■□□□□ 0.43
DSP-203ENST00000506617 SPDYE5A6NIY4 337 aa17.73■□□□□ 0.43
DSP-203ENST00000506617 SREBF2Q12772 1141 aa17.73■□□□□ 0.43
DSP-203ENST00000506617 NOL9Q5SY16 702 aaKnown RBP17.73■□□□□ 0.43
DSP-203ENST00000506617 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
DSP-203ENST00000506617 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
DSP-203ENST00000506617 PUS7LQ9H0K6 701 aaKnown RBP17.73■□□□□ 0.43
DSP-203ENST00000506617 SAP30BPQ9UHR5 308 aaKnown RBP17.73■□□□□ 0.43
DSP-203ENST00000506617 PALD1Q9ULE6 856 aa17.73■□□□□ 0.43
DSP-203ENST00000506617 MANSC4A6NHS7 340 aaPredicted RBP17.72■□□□□ 0.43
DSP-203ENST00000506617 PHF20L1A8MW92 1017 aa17.72■□□□□ 0.43
DSP-203ENST00000506617 CA12O43570 354 aa17.72■□□□□ 0.43
DSP-203ENST00000506617 CDC45O75419 566 aa17.72■□□□□ 0.43
DSP-203ENST00000506617 MBD4O95243 580 aa17.72■□□□□ 0.43
DSP-203ENST00000506617 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
DSP-203ENST00000506617 GIMAP6Q6P9H5 292 aa17.72■□□□□ 0.43
DSP-203ENST00000506617 STRBPQ96SI9 672 aaKnown RBP17.72■□□□□ 0.43
DSP-203ENST00000506617 CRNKL1Q9BZJ0 848 aaKnown RBP17.72■□□□□ 0.43
DSP-203ENST00000506617 DHX36Q9H2U1 1008 aaKnown RBP17.72■□□□□ 0.43
DSP-203ENST00000506617 ARMT1Q9H993 441 aa17.72■□□□□ 0.43
DSP-203ENST00000506617 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.72■□□□□ 0.43
DSP-203ENST00000506617 PTPRFP10586 1907 aa17.72■□□□□ 0.43
DSP-203ENST00000506617 CASP8AP2Q9UKL3 1982 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 TBC1D12O60347 775 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 EIF5BO60841 1220 aaKnown RBP17.71■□□□□ 0.43
DSP-203ENST00000506617 TM4SF4P48230 202 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 LBX1P52954 281 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 NMIQ13287 307 aaPredicted RBP17.71■□□□□ 0.43
DSP-203ENST00000506617 ERO1BQ86YB8 467 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 ATP8A2Q9NTI2 1148 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 RNF186Q9NXI6 227 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 SAGE1Q9NXZ1 904 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 PI4KBQ9UBF8 816 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 TAOK2Q9UL54 1235 aa17.71■□□□□ 0.43
DSP-203ENST00000506617 MYH8P13535 1937 aa17.7■□□□□ 0.42
DSP-203ENST00000506617 TRPA1O75762 1119 aa17.7■□□□□ 0.42
DSP-203ENST00000506617 HLA-DOAP06340 250 aa17.7■□□□□ 0.42
DSP-203ENST00000506617 SCYL3Q8IZE3 742 aa17.7■□□□□ 0.42
DSP-203ENST00000506617 SDR42E1Q8WUS8 393 aa17.7■□□□□ 0.42
DSP-203ENST00000506617 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
DSP-203ENST00000506617 DNAJC18Q9H819 358 aa17.7■□□□□ 0.42
DSP-203ENST00000506617 HERC5Q9UII4 1024 aaKnown RBP17.7■□□□□ 0.42
DSP-203ENST00000506617 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
DSP-203ENST00000506617 IRF6O14896 467 aa17.69■□□□□ 0.42
DSP-203ENST00000506617 GPAA1O43292 621 aa17.69■□□□□ 0.42
DSP-203ENST00000506617 PPIL2Q13356 520 aa17.69■□□□□ 0.42
DSP-203ENST00000506617 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
DSP-203ENST00000506617 M0R2C6 588 aa17.68■□□□□ 0.42
DSP-203ENST00000506617 IGF2BP3O00425 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
DSP-203ENST00000506617 SGSM2O43147 1006 aa17.68■□□□□ 0.42
DSP-203ENST00000506617 PRKAB2O43741 272 aa17.68■□□□□ 0.42
DSP-203ENST00000506617 PPATQ06203 517 aa17.68■□□□□ 0.42
DSP-203ENST00000506617 CRACR2BQ8N4Y2 399 aaPredicted RBP17.68■□□□□ 0.42
DSP-203ENST00000506617 MS4A4AQ96JQ5 239 aa17.68■□□□□ 0.42
DSP-203ENST00000506617 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.68■□□□□ 0.42
DSP-203ENST00000506617 CCDC171Q6TFL3 1326 aa17.68■□□□□ 0.42
DSP-203ENST00000506617 CCL15-CCL14A0A0B4J2E2 113 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 TESPA1A2RU30 521 aaPredicted RBP17.67■□□□□ 0.42
DSP-203ENST00000506617 PATL2C9JE40 543 aaKnown RBP17.67■□□□□ 0.42
DSP-203ENST00000506617 CTNND1O60716 968 aaKnown RBP17.67■□□□□ 0.42
DSP-203ENST00000506617 GTF2A2P52657 109 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 INHBEP58166 350 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 RRP1BQ14684 758 aaKnown RBP17.67■□□□□ 0.42
DSP-203ENST00000506617 ALX1Q15699 326 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 CCL15Q16663 113 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 METTL16Q86W50 562 aaKnown RBP17.67■□□□□ 0.42
DSP-203ENST00000506617 IFNL1Q8IU54 200 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 FOXP4Q8IVH2 680 aaPredicted RBP17.67■□□□□ 0.42
DSP-203ENST00000506617 BRI3BPQ8WY22 251 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
DSP-203ENST00000506617 TRIM34Q9BYJ4 488 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 DCP1AQ9NPI6 582 aaPredicted RBP17.67■□□□□ 0.42
DSP-203ENST00000506617 PRDM10Q9NQV6 1147 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 PICK1Q9NRD5 415 aa17.67■□□□□ 0.42
DSP-203ENST00000506617 EPB41L2O43491 1005 aaKnown RBP17.66■□□□□ 0.42
DSP-203ENST00000506617 PTPRAP18433 802 aa17.66■□□□□ 0.42
DSP-203ENST00000506617 CAP2P40123 477 aa17.66■□□□□ 0.42
DSP-203ENST00000506617 COL13A1Q5TAT6 717 aaPredicted RBP17.66■□□□□ 0.42
DSP-203ENST00000506617 TTC6Q86TZ1 520 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms