RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 OSBPL3Q9H4L5 887 aa22.01■■□□□ 1.11
PDLIM7-216ENST00000506537 DNAJC18Q9H819 358 aa22.01■■□□□ 1.11
PDLIM7-216ENST00000506537 SPDYE5A6NIY4 337 aa22■■□□□ 1.11
PDLIM7-216ENST00000506537 ZFYP08048 801 aaPredicted RBP22■■□□□ 1.11
PDLIM7-216ENST00000506537 APPBP2Q92624 585 aa22■■□□□ 1.11
PDLIM7-216ENST00000506537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22■■□□□ 1.11
PDLIM7-216ENST00000506537 PI4KBQ9UBF8 816 aa22■■□□□ 1.11
PDLIM7-216ENST00000506537 M0R2C6 588 aa21.99■■□□□ 1.11
PDLIM7-216ENST00000506537 RRP1BQ14684 758 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-216ENST00000506537 METTL16Q86W50 562 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-216ENST00000506537 AIDAQ96BJ3 306 aa21.99■■□□□ 1.11
PDLIM7-216ENST00000506537 OTUD5Q96G74 571 aa21.99■■□□□ 1.11
PDLIM7-216ENST00000506537 DCP1AQ9NPI6 582 aaPredicted RBP21.99■■□□□ 1.11
PDLIM7-216ENST00000506537 EVX2Q03828 476 aa21.98■■□□□ 1.11
PDLIM7-216ENST00000506537 EVI5LQ96CN4 794 aa21.98■■□□□ 1.11
PDLIM7-216ENST00000506537 HERC5Q9UII4 1024 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-216ENST00000506537 BAZ2AQ9UIF9 1905 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-216ENST00000506537 ATAD5Q96QE3 1844 aa21.97■■□□□ 1.11
PDLIM7-216ENST00000506537 ERO1BQ86YB8 467 aa21.97■■□□□ 1.11
PDLIM7-216ENST00000506537 SCYL3Q8IZE3 742 aa21.97■■□□□ 1.11
PDLIM7-216ENST00000506537 STRBPQ96SI9 672 aaKnown RBP21.97■■□□□ 1.11
PDLIM7-216ENST00000506537 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
PDLIM7-216ENST00000506537 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-216ENST00000506537 MANSC4A6NHS7 340 aaPredicted RBP21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 HLA-DOAP06340 250 aa21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 CENPBP07199 599 aaPredicted RBP21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 TM4SF4P48230 202 aa21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 PLCD1P51178 756 aa21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 ZMYM1Q5SVZ6 1142 aa21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 REM2Q8IYK8 340 aaPredicted RBP21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 MS4A4AQ96JQ5 239 aa21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 TSKSQ9UJT2 592 aa21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 PHIPQ8WWQ0 1821 aa21.96■■□□□ 1.11
PDLIM7-216ENST00000506537 GPAA1O43292 621 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 CTNND1O60716 968 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 CYP2D6P10635 497 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 HSPA8P11142 646 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 SREBF2Q12772 1141 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 PPIL2Q13356 520 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 LRRFIP1Q32MZ4 808 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 FOXP4Q8IVH2 680 aaPredicted RBP21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 BEGAINQ9BUH8 593 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 EHD4Q9H223 541 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 RNF186Q9NXI6 227 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 MCM9Q9NXL9 1143 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 SLC4A4Q9Y6R1 1079 aa21.95■■□□□ 1.1
PDLIM7-216ENST00000506537 IRF6O14896 467 aa21.94■■□□□ 1.1
PDLIM7-216ENST00000506537 PPATQ06203 517 aa21.94■■□□□ 1.1
PDLIM7-216ENST00000506537 SHROOM1Q2M3G4 852 aaPredicted RBP21.94■■□□□ 1.1
PDLIM7-216ENST00000506537 CRACR2BQ8N4Y2 399 aaPredicted RBP21.94■■□□□ 1.1
PDLIM7-216ENST00000506537 ATP8A2Q9NTI2 1148 aa21.94■■□□□ 1.1
PDLIM7-216ENST00000506537 TESPA1A2RU30 521 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 TRIM6-TRIM34B2RNG4 842 aa21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 IGF2BP3O00425 579 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 PTPRAP18433 802 aa21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 CAP2P40123 477 aa21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 CTCFP49711 727 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 JAG1P78504 1218 aa21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 TTC6Q86TZ1 520 aa21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 CCDC84Q86UT8 332 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 PTPN18Q99952 460 aa21.93■■□□□ 1.1
PDLIM7-216ENST00000506537 GSG1L2A8MUP6 293 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 SMIM22K7EJ46 135 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 CA12O43570 354 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 TRPA1O75762 1119 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 POLR3DP05423 398 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 GABPAQ06546 454 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 BRI3BPQ8WY22 251 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 RILPL2Q969X0 211 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 EPB41L4AQ9HCS5 686 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 PICK1Q9NRD5 415 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 SAGE1Q9NXZ1 904 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 SERPINB13Q9UIV8 391 aa21.92■■□□□ 1.1
PDLIM7-216ENST00000506537 CYP2D7A0A087X1C5 515 aa21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 NEFLP07196 543 aa21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 GSPT1P15170 499 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 GTF2A2P52657 109 aa21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 CCDC129Q6ZRS4 1044 aa21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 CENPQQ7L2Z9 268 aaPredicted RBP21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 IFNL1Q8IU54 200 aa21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 FAM227BQ96M60 508 aa21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 TRIM34Q9BYJ4 488 aa21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 KCNH4Q9UQ05 1017 aa21.91■■□□□ 1.1
PDLIM7-216ENST00000506537 PTPRFP10586 1907 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 CCL15-CCL14A0A0B4J2E2 113 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 A0A0D9SFI3 127 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 GDF11O95390 407 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 SHMT1P34896 483 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 LBX1P52954 281 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 INHBEP58166 350 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 CCL15Q16663 113 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 TTC22Q5TAA0 569 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 TATDN1Q6P1N9 297 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 ZHX2Q9Y6X8 837 aa21.9■■□□□ 1.1
PDLIM7-216ENST00000506537 USP17L12C9JPN9 530 aa21.89■■□□□ 1.09
PDLIM7-216ENST00000506537 USP17L21D6R901 530 aa21.89■■□□□ 1.09
PDLIM7-216ENST00000506537 FOXP2O15409 715 aa21.89■■□□□ 1.09
PDLIM7-216ENST00000506537 SNAPC2Q13487 334 aa21.89■■□□□ 1.09
PDLIM7-216ENST00000506537 C12orf60Q5U649 245 aa21.89■■□□□ 1.09
PDLIM7-216ENST00000506537 CTR9Q6PD62 1173 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms