RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TTLL4Q14679 1199 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 ANKRD34AQ69YU3 496 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 NACC1Q96RE7 527 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 HIRIP3Q9BW71 556 aaPredicted RBP9.1□□□□□ -0.95
HERC4-213ENST00000506515 WNT10AQ9GZT5 417 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 ATXN3LQ9H3M9 355 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 ANTXR1Q9H6X2 564 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 REV1Q9UBZ9 1251 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 TACC3Q9Y6A5 838 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 PRR36Q9H6K5 1346 aa9.09□□□□□ -0.95
HERC4-213ENST00000506515 SART1O43290 800 aaKnown RBP9.09□□□□□ -0.95
HERC4-213ENST00000506515 TIAF1O95411 115 aa9.09□□□□□ -0.95
HERC4-213ENST00000506515 HCLS1P14317 486 aaPredicted RBP9.09□□□□□ -0.95
HERC4-213ENST00000506515 ASPAP45381 313 aa9.09□□□□□ -0.95
HERC4-213ENST00000506515 IREB2P48200 963 aaKnown RBP9.09□□□□□ -0.95
HERC4-213ENST00000506515 GIPRP48546 466 aa9.09□□□□□ -0.95
HERC4-213ENST00000506515 RBL2Q08999 1139 aa9.09□□□□□ -0.95
HERC4-213ENST00000506515 ZBTB37Q5TC79 503 aa9.09□□□□□ -0.95
HERC4-213ENST00000506515 RNF214Q8ND24 703 aa9.09□□□□□ -0.95
HERC4-213ENST00000506515 FANCGO15287 622 aa9.08□□□□□ -0.96
HERC4-213ENST00000506515 RNGTTO60942 597 aaKnown RBP9.08□□□□□ -0.96
HERC4-213ENST00000506515 NRG1Q02297 640 aaPredicted RBP9.08□□□□□ -0.96
HERC4-213ENST00000506515 MLECQ14165 292 aa9.08□□□□□ -0.96
HERC4-213ENST00000506515 ANKS3Q6ZW76 656 aa9.08□□□□□ -0.96
HERC4-213ENST00000506515 CKAP2LQ8IYA6 745 aa9.08□□□□□ -0.96
HERC4-213ENST00000506515 C2CD4AQ8NCU7 369 aaPredicted RBP9.08□□□□□ -0.96
HERC4-213ENST00000506515 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
HERC4-213ENST00000506515 PIDD1Q9HB75 910 aa9.08□□□□□ -0.96
HERC4-213ENST00000506515 KLHL3Q9UH77 587 aa9.08□□□□□ -0.96
HERC4-213ENST00000506515 ACTL7BQ9Y614 415 aa9.08□□□□□ -0.96
HERC4-213ENST00000506515 SMAD7O15105 426 aaKnown RBP9.07□□□□□ -0.96
HERC4-213ENST00000506515 NOS3P29474 1203 aa9.07□□□□□ -0.96
HERC4-213ENST00000506515 PREPP48147 710 aa9.07□□□□□ -0.96
HERC4-213ENST00000506515 LSRQ86X29 649 aaPredicted RBP9.07□□□□□ -0.96
HERC4-213ENST00000506515 FAM169BQ8N8A8 192 aa9.07□□□□□ -0.96
HERC4-213ENST00000506515 CEP41Q9BYV8 373 aa9.07□□□□□ -0.96
HERC4-213ENST00000506515 SSU72Q9NP77 194 aaKnown RBP9.07□□□□□ -0.96
HERC4-213ENST00000506515 FAM105AQ9NUU6 356 aa9.07□□□□□ -0.96
HERC4-213ENST00000506515 R3HCC1Q9Y3T6 440 aaKnown RBP9.07□□□□□ -0.96
HERC4-213ENST00000506515 ABCC9O60706 1549 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 FAM181BA6NEQ2 426 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 GAS2O43903 313 aaKnown RBP9.06□□□□□ -0.96
HERC4-213ENST00000506515 DNAJA2O60884 412 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 NEFMP07197 916 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 LRRFIP1Q32MZ4 808 aaKnown RBP9.06□□□□□ -0.96
HERC4-213ENST00000506515 RUFY4Q6ZNE9 571 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 CDC37L1Q7L3B6 337 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 DPH6Q7L8W6 267 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 RBBP8NLQ8NC74 664 aaPredicted RBP9.06□□□□□ -0.96
HERC4-213ENST00000506515 ZNF507Q8TCN5 953 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 HNRNPLLQ8WVV9 542 aaKnown RBP9.06□□□□□ -0.96
HERC4-213ENST00000506515 ACSF2Q96CM8 615 aaPredicted RBP9.06□□□□□ -0.96
HERC4-213ENST00000506515 LNPKQ9C0E8 428 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 PRKAG3Q9UGI9 489 aa9.06□□□□□ -0.96
HERC4-213ENST00000506515 SLC22A31A6NKX4 558 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 RAB6AP20340 208 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 NTF4P34130 210 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 USP11P51784 963 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 PPP2R5EQ16537 467 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 TMEM201Q5SNT2 666 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 OVOS1Q6IE37 1185 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 OR6P1Q8NGX9 317 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 TMEM40Q8WWA1 233 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 ISL2Q96A47 359 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 UBL7Q96S82 380 aaPredicted RBP9.05□□□□□ -0.96
HERC4-213ENST00000506515 FBRSQ9HAH7 460 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 GMIPQ9P107 970 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 TJP2Q9UDY2 1190 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 ADAM30Q9UKF2 790 aa9.05□□□□□ -0.96
HERC4-213ENST00000506515 UPK3BL1B0FP48 263 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 CHURC1-FNTBB4DL54 471 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 UPK3BL2E5RIL1 263 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 ADGRE1Q14246 886 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 SOGA3Q5TF21 947 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 UBE3DQ7Z6J8 389 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 HID1Q8IV36 788 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 TRIM55Q9BYV6 548 aa9.04□□□□□ -0.96
HERC4-213ENST00000506515 GSX1Q9H4S2 264 aaPredicted RBP9.04□□□□□ -0.96
HERC4-213ENST00000506515 LOC105371045A0A1W2PR82 267 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 MEIS3P2A8K0S8 358 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 NKG7Q16617 165 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 TNNI3KQ59H18 835 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 ARSHQ5FYA8 562 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 Q6ZS46 218 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
HERC4-213ENST00000506515 MCATQ8IVS2 390 aaKnown RBP9.03□□□□□ -0.96
HERC4-213ENST00000506515 SMYD4Q8IYR2 804 aaPredicted RBP9.03□□□□□ -0.96
HERC4-213ENST00000506515 ATG4CQ96DT6 458 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 TMEM87BQ96K49 555 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 DPH2Q9BQC3 489 aaPredicted RBP9.03□□□□□ -0.96
HERC4-213ENST00000506515 LGR6Q9HBX8 967 aa9.03□□□□□ -0.96
HERC4-213ENST00000506515 CCDC144BQ3MJ40 725 aa9.02□□□□□ -0.97
HERC4-213ENST00000506515 CDPF1Q6NVV7 123 aa9.02□□□□□ -0.97
HERC4-213ENST00000506515 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.02□□□□□ -0.97
HERC4-213ENST00000506515 KCT2Q8NC54 265 aa9.02□□□□□ -0.97
HERC4-213ENST00000506515 ACTR10Q9NZ32 417 aa9.02□□□□□ -0.97
HERC4-213ENST00000506515 DAGLAQ9Y4D2 1042 aa9.02□□□□□ -0.97
HERC4-213ENST00000506515 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms