RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 BRCA2P51587 3418 aa17.6■□□□□ 0.41
CDC42SE2-209ENST00000506419 IGSF3O75054 1194 aa17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 BCRP11274 1271 aa17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 CAP2P40123 477 aa17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 PSMC4P43686 418 aa17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 METTL16Q86W50 562 aaKnown RBP17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 TRIM47Q96LD4 638 aa17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 PI4KBQ9UBF8 816 aa17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 DDX19BQ9UMR2 479 aa17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 MKI67P46013 3256 aaKnown RBP17.59■□□□□ 0.41
CDC42SE2-209ENST00000506419 APBB1O00213 710 aa17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 IDH1O75874 414 aaKnown RBP17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 PLCG2P16885 1265 aa17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 EN2P19622 333 aaPredicted RBP17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 SPP2Q13103 211 aa17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 KIF22Q14807 665 aa17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 HSP90AB4PQ58FF6 505 aa17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 ZNF333Q96JL9 665 aa17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 DHX36Q9H2U1 1008 aaKnown RBP17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 DNAJC18Q9H819 358 aa17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 PALD1Q9ULE6 856 aa17.58■□□□□ 0.4
CDC42SE2-209ENST00000506419 COL2A1P02458 1487 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 FLT1P17948 1338 aa17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 TREML2Q5T2D2 321 aa17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 FOXP4Q8IVH2 680 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 MAGEB6Q8N7X4 407 aa17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 MIGA1Q8NAN2 632 aa17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 SH3TC2Q8TF17 1288 aa17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 PARK7Q99497 189 aaKnown RBP17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 SAP30BPQ9UHR5 308 aaKnown RBP17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 HERC5Q9UII4 1024 aaKnown RBP17.57■□□□□ 0.4
CDC42SE2-209ENST00000506419 FMNL1O95466 1100 aaPredicted RBP17.56■□□□□ 0.4
CDC42SE2-209ENST00000506419 OSBPP22059 807 aa17.56■□□□□ 0.4
CDC42SE2-209ENST00000506419 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
CDC42SE2-209ENST00000506419 SRRDQ9UH36 339 aa17.56■□□□□ 0.4
CDC42SE2-209ENST00000506419 SLC45A1Q9Y2W3 748 aa17.56■□□□□ 0.4
CDC42SE2-209ENST00000506419 USP17L5A8MUK1 530 aa17.55■□□□□ 0.4
CDC42SE2-209ENST00000506419 GNRH1P01148 92 aa17.55■□□□□ 0.4
CDC42SE2-209ENST00000506419 SLC9C1Q4G0N8 1177 aa17.55■□□□□ 0.4
CDC42SE2-209ENST00000506419 CLASRPQ8N2M8 674 aaKnown RBP17.55■□□□□ 0.4
CDC42SE2-209ENST00000506419 ZNF280CQ8ND82 737 aa17.55■□□□□ 0.4
CDC42SE2-209ENST00000506419 HMMRO75330 724 aa17.54■□□□□ 0.4
CDC42SE2-209ENST00000506419 MYCP01106 439 aaPredicted RBP17.54■□□□□ 0.4
CDC42SE2-209ENST00000506419 PRMT2P55345 433 aa17.54■□□□□ 0.4
CDC42SE2-209ENST00000506419 MAP3K12Q12852 859 aa17.54■□□□□ 0.4
CDC42SE2-209ENST00000506419 NBPF11Q86T75 865 aa17.54■□□□□ 0.4
CDC42SE2-209ENST00000506419 BCL11AQ9H165 835 aa17.54■□□□□ 0.4
CDC42SE2-209ENST00000506419 AGTPBP1Q9UPW5 1226 aa17.54■□□□□ 0.4
CDC42SE2-209ENST00000506419 RAB11FIP3O75154 756 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 HMGCS2P54868 508 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 SLC4A8Q2Y0W8 1093 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 SH3D19Q5HYK7 790 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 EDC3Q96F86 508 aaKnown RBP17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 WDR18Q9BV38 432 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 GABRQQ9UN88 632 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 DOCK2Q92608 1830 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 PDE4DIPQ5VU43 2346 aa17.53■□□□□ 0.4
CDC42SE2-209ENST00000506419 ZSWIM8A7E2V4 1837 aa17.52■□□□□ 0.4
CDC42SE2-209ENST00000506419 GDF11O95390 407 aa17.52■□□□□ 0.4
CDC42SE2-209ENST00000506419 IFIT2P09913 472 aaKnown RBP17.52■□□□□ 0.4
CDC42SE2-209ENST00000506419 HOXD10P28358 340 aa17.52■□□□□ 0.4
CDC42SE2-209ENST00000506419 MTFR1Q15390 333 aa17.52■□□□□ 0.4
CDC42SE2-209ENST00000506419 PROCA1Q8NCQ7 364 aaPredicted RBP17.52■□□□□ 0.4
CDC42SE2-209ENST00000506419 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDC42SE2-209ENST00000506419 TMEM106CQ9BVX2 250 aa17.52■□□□□ 0.4
CDC42SE2-209ENST00000506419 GOLIM4O00461 696 aa17.51■□□□□ 0.39
CDC42SE2-209ENST00000506419 PDE6AP16499 860 aa17.51■□□□□ 0.39
CDC42SE2-209ENST00000506419 PRKCZQ05513 592 aa17.51■□□□□ 0.39
CDC42SE2-209ENST00000506419 SLFNL1Q499Z3 407 aa17.51■□□□□ 0.39
CDC42SE2-209ENST00000506419 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
CDC42SE2-209ENST00000506419 CRACR2BQ8N4Y2 399 aaPredicted RBP17.51■□□□□ 0.39
CDC42SE2-209ENST00000506419 TBC1D2Q9BYX2 928 aa17.51■□□□□ 0.39
CDC42SE2-209ENST00000506419 MYPNQ86TC9 1320 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 MYO5AQ9Y4I1 1855 aaKnown RBP17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 SMARCA5O60264 1052 aaPredicted RBP17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 USP5P45974 858 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 PLCD1P51178 756 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 FCGRTP55899 365 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 BACE1P56817 501 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 TATDN1Q6P1N9 297 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 ANKRD13CQ8N6S4 541 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 RAET1EQ8TD07 263 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
CDC42SE2-209ENST00000506419 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 MAGEB6P1A0A0J9YX57 407 aa17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 HLA-DOAP06340 250 aa17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 ASNSP08243 561 aa17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 GRK4P32298 578 aa17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 EVX2Q03828 476 aa17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 TTF1Q15361 905 aaPredicted RBP17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 TMED8Q6PL24 325 aaPredicted RBP17.49■□□□□ 0.39
CDC42SE2-209ENST00000506419 SMCR8Q8TEV9 937 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms