RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TM4SF4P48230 202 aa20.1■□□□□ 0.81
SNCA-209ENST00000506244 GTF2A2P52657 109 aa20.1■□□□□ 0.81
SNCA-209ENST00000506244 PPATQ06203 517 aa20.1■□□□□ 0.81
SNCA-209ENST00000506244 PPIL2Q13356 520 aa20.1■□□□□ 0.81
SNCA-209ENST00000506244 TTC6Q86TZ1 520 aa20.1■□□□□ 0.81
SNCA-209ENST00000506244 SCYL3Q8IZE3 742 aa20.1■□□□□ 0.81
SNCA-209ENST00000506244 LCORLQ8N3X6 602 aa20.1■□□□□ 0.81
SNCA-209ENST00000506244 APPBP2Q92624 585 aa20.1■□□□□ 0.81
SNCA-209ENST00000506244 PHF20L1A8MW92 1017 aa20.09■□□□□ 0.81
SNCA-209ENST00000506244 RNF113AO15541 343 aaKnown RBP20.09■□□□□ 0.81
SNCA-209ENST00000506244 GJA5P36382 358 aa20.09■□□□□ 0.81
SNCA-209ENST00000506244 OTUD7BQ6GQQ9 843 aa20.09■□□□□ 0.81
SNCA-209ENST00000506244 FOXP4Q8IVH2 680 aaPredicted RBP20.09■□□□□ 0.81
SNCA-209ENST00000506244 ARMT1Q9H993 441 aa20.09■□□□□ 0.81
SNCA-209ENST00000506244 SAP30BPQ9UHR5 308 aaKnown RBP20.09■□□□□ 0.81
SNCA-209ENST00000506244 PALD1Q9ULE6 856 aa20.09■□□□□ 0.81
SNCA-209ENST00000506244 SIPA1L1O43166 1804 aa20.09■□□□□ 0.81
SNCA-209ENST00000506244 HSPA8P11142 646 aaKnown RBP20.08■□□□□ 0.81
SNCA-209ENST00000506244 SNAPC2Q13487 334 aa20.08■□□□□ 0.81
SNCA-209ENST00000506244 METTL16Q86W50 562 aaKnown RBP20.08■□□□□ 0.81
SNCA-209ENST00000506244 TICAM2Q86XR7 235 aa20.08■□□□□ 0.81
SNCA-209ENST00000506244 AMOTL1Q8IY63 956 aa20.08■□□□□ 0.81
SNCA-209ENST00000506244 EVI5LQ96CN4 794 aa20.08■□□□□ 0.81
SNCA-209ENST00000506244 EHD4Q9H223 541 aa20.08■□□□□ 0.81
SNCA-209ENST00000506244 PRDM10Q9NQV6 1147 aa20.08■□□□□ 0.81
SNCA-209ENST00000506244 ATP8A2Q9NTI2 1148 aa20.08■□□□□ 0.81
SNCA-209ENST00000506244 RNF186Q9NXI6 227 aa20.08■□□□□ 0.81
SNCA-209ENST00000506244 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
SNCA-209ENST00000506244 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
SNCA-209ENST00000506244 TAOK2Q9UL54 1235 aa20.07■□□□□ 0.8
SNCA-209ENST00000506244 FAM196BA6NMK8 535 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 TRPA1O75762 1119 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 POLR3DP05423 398 aaPredicted RBP20.06■□□□□ 0.8
SNCA-209ENST00000506244 NEFLP07196 543 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 CETPP11597 493 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 SDR42E1Q8WUS8 393 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 TBC1D2Q9BYX2 928 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 PUS7LQ9H0K6 701 aaKnown RBP20.06■□□□□ 0.8
SNCA-209ENST00000506244 OSBPL3Q9H4L5 887 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 DCP1AQ9NPI6 582 aaPredicted RBP20.06■□□□□ 0.8
SNCA-209ENST00000506244 GINM1Q9NU53 330 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 MCM9Q9NXL9 1143 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 SERPINB13Q9UIV8 391 aa20.06■□□□□ 0.8
SNCA-209ENST00000506244 CCL15-CCL14A0A0B4J2E2 113 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 TESPA1A2RU30 521 aaPredicted RBP20.05■□□□□ 0.8
SNCA-209ENST00000506244 IRF6O14896 467 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 GNAT2P19087 354 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 LBX1P52954 281 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 CCL15Q16663 113 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 SLFNL1Q499Z3 407 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 IFNL1Q8IU54 200 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 PLEKHM2Q8IWE5 1019 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 SLC4A4Q9Y6R1 1079 aa20.05■□□□□ 0.8
SNCA-209ENST00000506244 ATAD5Q96QE3 1844 aa20.04■□□□□ 0.8
SNCA-209ENST00000506244 PTPRAP18433 802 aa20.04■□□□□ 0.8
SNCA-209ENST00000506244 CAP2P40123 477 aa20.04■□□□□ 0.8
SNCA-209ENST00000506244 SLC4A8Q2Y0W8 1093 aa20.04■□□□□ 0.8
SNCA-209ENST00000506244 MS4A4AQ96JQ5 239 aa20.04■□□□□ 0.8
SNCA-209ENST00000506244 CFHR5Q9BXR6 569 aa20.04■□□□□ 0.8
SNCA-209ENST00000506244 KCNH4Q9UQ05 1017 aa20.04■□□□□ 0.8
SNCA-209ENST00000506244 CHGBP05060 677 aa20.03■□□□□ 0.8
SNCA-209ENST00000506244 ASNSP08243 561 aa20.03■□□□□ 0.8
SNCA-209ENST00000506244 OSBP2Q969R2 916 aa20.03■□□□□ 0.8
SNCA-209ENST00000506244 DNAJC18Q9H819 358 aa20.03■□□□□ 0.8
SNCA-209ENST00000506244 ZCCHC17Q9NP64 241 aaKnown RBP20.03■□□□□ 0.8
SNCA-209ENST00000506244 ARPP21Q9UBL0 812 aaPredicted RBP20.03■□□□□ 0.8
SNCA-209ENST00000506244 TSKSQ9UJT2 592 aa20.03■□□□□ 0.8
SNCA-209ENST00000506244 ZHX2Q9Y6X8 837 aa20.03■□□□□ 0.8
SNCA-209ENST00000506244 TRIM6-TRIM34B2RNG4 842 aa20.02■□□□□ 0.8
SNCA-209ENST00000506244 CXCL11O14625 94 aa20.02■□□□□ 0.8
SNCA-209ENST00000506244 GPAA1O43292 621 aa20.02■□□□□ 0.8
SNCA-209ENST00000506244 ZMYM1Q5SVZ6 1142 aa20.02■□□□□ 0.8
SNCA-209ENST00000506244 GIMAP6Q6P9H5 292 aa20.02■□□□□ 0.8
SNCA-209ENST00000506244 BRI3BPQ8WY22 251 aa20.02■□□□□ 0.8
SNCA-209ENST00000506244 STRBPQ96SI9 672 aaKnown RBP20.02■□□□□ 0.8
SNCA-209ENST00000506244 AS3MTQ9HBK9 375 aa20.02■□□□□ 0.8
SNCA-209ENST00000506244 IGF2BP3O00425 579 aaKnown RBP eCLIP20.01■□□□□ 0.79
SNCA-209ENST00000506244 PRKAB2O43741 272 aa20.01■□□□□ 0.79
SNCA-209ENST00000506244 SLURP2P0DP57 97 aa20.01■□□□□ 0.79
SNCA-209ENST00000506244 SWAP70Q9UH65 585 aa20.01■□□□□ 0.79
SNCA-209ENST00000506244 PLCD1P51178 756 aa20■□□□□ 0.79
SNCA-209ENST00000506244 NOM1Q5C9Z4 860 aaKnown RBP20■□□□□ 0.79
SNCA-209ENST00000506244 NACAP1Q9BZK3 213 aa20■□□□□ 0.79
SNCA-209ENST00000506244 BAZ2AQ9UIF9 1905 aaKnown RBP20■□□□□ 0.79
SNCA-209ENST00000506244 USP17L5A8MUK1 530 aa19.99■□□□□ 0.79
SNCA-209ENST00000506244 M0R2C6 588 aa19.99■□□□□ 0.79
SNCA-209ENST00000506244 TATDN1Q6P1N9 297 aa19.99■□□□□ 0.79
SNCA-209ENST00000506244 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
SNCA-209ENST00000506244 FASTKD5Q7L8L6 764 aaKnown RBP19.99■□□□□ 0.79
SNCA-209ENST00000506244 RILPL2Q969X0 211 aa19.99■□□□□ 0.79
SNCA-209ENST00000506244 ZBTB21Q9ULJ3 1066 aa19.99■□□□□ 0.79
SNCA-209ENST00000506244 AFG3L2Q9Y4W6 797 aa19.99■□□□□ 0.79
SNCA-209ENST00000506244 PHIPQ8WWQ0 1821 aa19.99■□□□□ 0.79
SNCA-209ENST00000506244 A0A0G2JLL6 359 aaPredicted RBP19.98■□□□□ 0.79
SNCA-209ENST00000506244 GDF11O95390 407 aa19.98■□□□□ 0.79
SNCA-209ENST00000506244 TDO2P48775 406 aa19.98■□□□□ 0.79
SNCA-209ENST00000506244 GABPAQ06546 454 aa19.98■□□□□ 0.79
SNCA-209ENST00000506244 CERKLQ49MI3 558 aaPredicted RBP19.98■□□□□ 0.79
SNCA-209ENST00000506244 PRRT2Q7Z6L0 340 aaPredicted RBP19.98■□□□□ 0.79
SNCA-209ENST00000506244 ANKRD23Q86SG2 305 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms