RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 CORINQ9Y5Q5 1042 aa6.55□□□□□ -1.36
TOPBP1-204ENST00000505804 MSTNO14793 375 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 PROCP04070 461 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 GRK4P32298 578 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 MCM4P33991 863 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 NTF4P34130 210 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 GJA8P48165 433 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 ETF1P62495 437 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 ZBTB37Q5TC79 503 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 ISL2Q96A47 359 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 GPRASP2Q96D09 838 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 WNT10AQ9GZT5 417 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 SEMA6CQ9H3T2 930 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 ACSS3Q9H6R3 686 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 DAGLAQ9Y4D2 1042 aa6.54□□□□□ -1.36
TOPBP1-204ENST00000505804 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
TOPBP1-204ENST00000505804 BEND4Q6ZU67 534 aa6.53□□□□□ -1.36
TOPBP1-204ENST00000505804 UBE3DQ7Z6J8 389 aa6.53□□□□□ -1.36
TOPBP1-204ENST00000505804 EZH1Q92800 747 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-204ENST00000505804 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 HMX2A2RU54 273 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 DYNC1LI2O43237 492 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 PGRP06401 933 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 PLCG1P19174 1290 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 ZC3H6P61129 1189 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 CLCQ05315 142 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 GK5Q6ZS86 529 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 CDC37L1Q7L3B6 337 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 CLEC10AQ8IUN9 316 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 ZNF507Q8TCN5 953 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 RASGRP4Q8TDF6 673 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 TINF2Q9BSI4 451 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 YIPF2Q9BWQ6 316 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 FBRSQ9HAH7 460 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 GINM1Q9NU53 330 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 STOML1Q9UBI4 398 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 PCOLCE2Q9UKZ9 415 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 EFR3BQ9Y2G0 817 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 RAXQ9Y2V3 346 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 PCDHB14Q9Y5E9 798 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 TACC3Q9Y6A5 838 aa6.52□□□□□ -1.37
TOPBP1-204ENST00000505804 ZNF165P49910 485 aa6.51□□□□□ -1.37
TOPBP1-204ENST00000505804 PDE4BQ07343 736 aa6.51□□□□□ -1.37
TOPBP1-204ENST00000505804 GNL2Q13823 731 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-204ENST00000505804 NKG7Q16617 165 aa6.51□□□□□ -1.37
TOPBP1-204ENST00000505804 PRR23CQ6ZRP0 262 aa6.51□□□□□ -1.37
TOPBP1-204ENST00000505804 FAM83CQ9BQN1 747 aa6.51□□□□□ -1.37
TOPBP1-204ENST00000505804 PRR36Q9H6K5 1346 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 UPK3BL1B0FP48 263 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 UPK3BL2E5RIL1 263 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 HTR3BO95264 441 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 ATF4P18848 351 aaPredicted RBP6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 MAP7Q14244 749 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 VPS37DQ86XT2 251 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 HID1Q8IV36 788 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 REXO1Q8N1G1 1221 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 ACSF2Q96CM8 615 aaPredicted RBP6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 SPATA32Q96LK8 384 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 EHMT1Q9H9B1 1298 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 REV1Q9UBZ9 1251 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 TJP2Q9UDY2 1190 aa6.5□□□□□ -1.37
TOPBP1-204ENST00000505804 ATE1O95260 518 aa6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 IGHA1P01876 353 aa6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 RANGAP1P46060 587 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 NASPP49321 788 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 SLBPQ14493 270 aaKnown RBP eCLIP6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 RSPO4Q2I0M5 234 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 NKAPLQ5M9Q1 402 aa6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 SEZ6L2Q6UXD5 910 aa6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 SLC43A3Q8NBI5 491 aa6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 KCT2Q8NC54 265 aa6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 ADAM30Q9UKF2 790 aa6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 PPT2Q9UMR5 302 aa6.49□□□□□ -1.37
TOPBP1-204ENST00000505804 CHURC1-FNTBB4DL54 471 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 FURINP09958 794 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 H2AFB1P0C5Y9 115 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 H2AFB2P0C5Z0 115 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 DNAJA1P31689 397 aaKnown RBP6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 SOX9P48436 509 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 COL9A2Q14055 689 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 TMEM201Q5SNT2 666 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 FBXW10Q5XX13 1052 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 MCATQ8IVS2 390 aaKnown RBP6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 SHISA5Q8N114 240 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 SEC16BQ96JE7 1060 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 TMEM87BQ96K49 555 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 FERD3LQ96RJ6 166 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 ANTXR1Q9H6X2 564 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 C1GALT1Q9NS00 363 aa6.48□□□□□ -1.37
TOPBP1-204ENST00000505804 SLC22A31A6NKX4 558 aa6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 DNAJA2O60884 412 aa6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 ARID5AQ03989 594 aa6.47□□□□□ -1.37
TOPBP1-204ENST00000505804 CDK5R2Q13319 367 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms