RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 MBD4O95243 580 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 HSPA8P11142 646 aaKnown RBP10.51□□□□□ -0.73
CTSB-205ENST00000505496 PTPRAP18433 802 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 USP5P45974 858 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 PPIL2Q13356 520 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 LRRFIP1Q32MZ4 808 aaKnown RBP10.51□□□□□ -0.73
CTSB-205ENST00000505496 SCYL3Q8IZE3 742 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 APPBP2Q92624 585 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 EVI5LQ96CN4 794 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 STRBPQ96SI9 672 aaKnown RBP10.51□□□□□ -0.73
CTSB-205ENST00000505496 BEGAINQ9BUH8 593 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 ARMT1Q9H993 441 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.51□□□□□ -0.733e-7■□□□□ 9.8
CTSB-205ENST00000505496 PRDM10Q9NQV6 1147 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 ATP8A2Q9NTI2 1148 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 RNF186Q9NXI6 227 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 TAOK2Q9UL54 1235 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 OTOFQ9HC10 1997 aa10.51□□□□□ -0.73
CTSB-205ENST00000505496 IRF6O14896 467 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 HLA-DOAP06340 250 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 GTF2A2P52657 109 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 GABPAQ06546 454 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
CTSB-205ENST00000505496 RRP1BQ14684 758 aaKnown RBP10.5□□□□□ -0.73
CTSB-205ENST00000505496 ZMYM1Q5SVZ6 1142 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 TATDN1Q6P1N9 297 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 PTPN18Q99952 460 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 GINM1Q9NU53 330 aa10.5□□□□□ -0.73
CTSB-205ENST00000505496 LAMB1P07942 1786 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 FOCADQ5VW36 1801 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 IGF2BP3O00425 579 aaKnown RBP eCLIP10.49□□□□□ -0.73
CTSB-205ENST00000505496 CXCL11O14625 94 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 PRKAB2O43741 272 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 PDE4AP27815 886 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 CAP2P40123 477 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 PLCD1P51178 756 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 SNAPC2Q13487 334 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 NOM1Q5C9Z4 860 aaKnown RBP10.49□□□□□ -0.73
CTSB-205ENST00000505496 GIMAP6Q6P9H5 292 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 TTC6Q86TZ1 520 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 SDR42E1Q8WUS8 393 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 BRI3BPQ8WY22 251 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 FSD1Q9BTV5 496 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 SAP30BPQ9UHR5 308 aaKnown RBP10.49□□□□□ -0.73
CTSB-205ENST00000505496 SERPINB13Q9UIV8 391 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 AFG3L2Q9Y4W6 797 aa10.49□□□□□ -0.73
CTSB-205ENST00000505496 DDX60LQ5H9U9 1706 aaKnown RBP10.49□□□□□ -0.73
CTSB-205ENST00000505496 GSG1L2A8MUP6 293 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 M0R2C6 588 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 GPAA1O43292 621 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 TRPA1O75762 1119 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 CETPP11597 493 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 GNAT2P19087 354 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 LBX1P52954 281 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 MOGSQ13724 837 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 TBC1D2Q9BYX2 928 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 ZCCHC17Q9NP64 241 aaKnown RBP10.48□□□□□ -0.73
CTSB-205ENST00000505496 PICK1Q9NRD5 415 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 MCM9Q9NXL9 1143 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 SLC4A4Q9Y6R1 1079 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 SIPA1L1O43166 1804 aa10.48□□□□□ -0.73
CTSB-205ENST00000505496 CDK5RAP2Q96SN8 1893 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 CCL15-CCL14A0A0B4J2E2 113 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 A0A0G2JLL6 359 aaPredicted RBP10.47□□□□□ -0.73
CTSB-205ENST00000505496 SHMT1P34896 483 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 JAG1P78504 1218 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 CCL15Q16663 113 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 SBK1Q52WX2 424 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 C12orf60Q5U649 245 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 OTUD7BQ6GQQ9 843 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 PRRT2Q7Z6L0 340 aaPredicted RBP10.47□□□□□ -0.73
CTSB-205ENST00000505496 CRACR2BQ8N4Y2 399 aaPredicted RBP10.47□□□□□ -0.73
CTSB-205ENST00000505496 ZHX2Q9Y6X8 837 aa10.47□□□□□ -0.73
CTSB-205ENST00000505496 USP17L5A8MUK1 530 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 PATL2C9JE40 543 aaKnown RBP10.46□□□□□ -0.73
CTSB-205ENST00000505496 BTBD19C9JJ37 291 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 USP17L12C9JPN9 530 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 USP17L21D6R901 530 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 FOXP2O15409 715 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 POLR3DP05423 398 aaPredicted RBP10.46□□□□□ -0.73
CTSB-205ENST00000505496 ASNSP08243 561 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 CYP2D6P10635 497 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 EVX2Q03828 476 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 COL13A1Q5TAT6 717 aaPredicted RBP10.46□□□□□ -0.73
CTSB-205ENST00000505496 FAM43AQ8N2R8 423 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 SEC62Q99442 399 aaKnown RBP10.46□□□□□ -0.73
CTSB-205ENST00000505496 WDR18Q9BV38 432 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 R3HDMLQ9H3Y0 253 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 EPB41L4AQ9HCS5 686 aaPredicted RBP10.46□□□□□ -0.73
CTSB-205ENST00000505496 HELLSQ9NRZ9 838 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.46□□□□□ -0.73
CTSB-205ENST00000505496 TSKSQ9UJT2 592 aa10.46□□□□□ -0.73
CTSB-205ENST00000505496 ROBO3Q96MS0 1386 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 GSPT1P15170 499 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms