RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 EN2P19622 333 aaPredicted RBP20.41■□□□□ 0.86
SYNE4-207ENST00000505054 NBPF11Q86T75 865 aa20.41■□□□□ 0.86
SYNE4-207ENST00000505054 FAM83AQ86UY5 434 aa20.41■□□□□ 0.86
SYNE4-207ENST00000505054 WRNIP1Q96S55 665 aa20.41■□□□□ 0.86
SYNE4-207ENST00000505054 FAM198AQ9UFP1 575 aa20.41■□□□□ 0.86
SYNE4-207ENST00000505054 TCRBV5S4A2TA0A5A2 114 aa20.4■□□□□ 0.86
SYNE4-207ENST00000505054 MAP4K4O95819 1239 aaPredicted RBP20.4■□□□□ 0.86
SYNE4-207ENST00000505054 CHGBP05060 677 aa20.4■□□□□ 0.86
SYNE4-207ENST00000505054 CETPP11597 493 aa20.4■□□□□ 0.86
SYNE4-207ENST00000505054 PPP4CP60510 307 aa20.4■□□□□ 0.86
SYNE4-207ENST00000505054 SLC9C2Q5TAH2 1124 aa20.4■□□□□ 0.86
SYNE4-207ENST00000505054 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
SYNE4-207ENST00000505054 ERO1BQ86YB8 467 aa20.4■□□□□ 0.86
SYNE4-207ENST00000505054 PLEKHM2Q8IWE5 1019 aa20.4■□□□□ 0.86
SYNE4-207ENST00000505054 IDI2Q9BXS1 227 aa20.4■□□□□ 0.86
SYNE4-207ENST00000505054 AATFQ9NY61 560 aaKnown RBP eCLIP20.4■□□□□ 0.86
SYNE4-207ENST00000505054 ZNF532Q9HCE3 1301 aa20.39■□□□□ 0.85
SYNE4-207ENST00000505054 PDE4AP27815 886 aa20.39■□□□□ 0.85
SYNE4-207ENST00000505054 DYNLL1P63167 89 aaKnown RBP20.39■□□□□ 0.85
SYNE4-207ENST00000505054 SLFNL1Q499Z3 407 aa20.39■□□□□ 0.85
SYNE4-207ENST00000505054 KBTBD3Q8NAB2 608 aa20.39■□□□□ 0.85
SYNE4-207ENST00000505054 MIGA1Q8NAN2 632 aa20.39■□□□□ 0.85
SYNE4-207ENST00000505054 SH3RF3Q8TEJ3 882 aaPredicted RBP20.39■□□□□ 0.85
SYNE4-207ENST00000505054 DDX4Q9NQI0 724 aaKnown RBP20.39■□□□□ 0.85
SYNE4-207ENST00000505054 AK9Q5TCS8 1911 aa20.39■□□□□ 0.85
SYNE4-207ENST00000505054 TLR2O60603 784 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 ADD2P35612 726 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 RGS3P49796 1198 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 TCP10Q12799 353 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 PPIL2Q13356 520 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 SNAPC2Q13487 334 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 KIF22Q14807 665 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 DCAF15Q66K64 600 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 ZFPM1Q8IX07 1006 aa20.38■□□□□ 0.85
SYNE4-207ENST00000505054 NOL10Q9BSC4 688 aaKnown RBP20.38■□□□□ 0.85
SYNE4-207ENST00000505054 BTBD19C9JJ37 291 aa20.37■□□□□ 0.85
SYNE4-207ENST00000505054 BAG3O95817 575 aa20.37■□□□□ 0.85
SYNE4-207ENST00000505054 LACTBP83111 547 aaPredicted RBP20.37■□□□□ 0.85
SYNE4-207ENST00000505054 TEX11Q8IYF3 940 aa20.37■□□□□ 0.85
SYNE4-207ENST00000505054 FAM151AQ8WW52 585 aa20.37■□□□□ 0.85
SYNE4-207ENST00000505054 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.37■□□□□ 0.85
SYNE4-207ENST00000505054 OSBPL3Q9H4L5 887 aa20.37■□□□□ 0.85
SYNE4-207ENST00000505054 IRF6O14896 467 aa20.36■□□□□ 0.85
SYNE4-207ENST00000505054 ENTPD3O75355 529 aa20.36■□□□□ 0.85
SYNE4-207ENST00000505054 GNRH1P01148 92 aa20.36■□□□□ 0.85
SYNE4-207ENST00000505054 PLCG2P16885 1265 aa20.36■□□□□ 0.85
SYNE4-207ENST00000505054 CENPQQ7L2Z9 268 aaPredicted RBP20.36■□□□□ 0.85
SYNE4-207ENST00000505054 ZKSCAN4Q969J2 545 aaPredicted RBP20.36■□□□□ 0.85
SYNE4-207ENST00000505054 RIOK1Q9BRS2 568 aaKnown RBP20.36■□□□□ 0.85
SYNE4-207ENST00000505054 NPM3O75607 178 aaKnown RBP20.35■□□□□ 0.85
SYNE4-207ENST00000505054 PICALMQ13492 652 aa20.35■□□□□ 0.85
SYNE4-207ENST00000505054 UBE3CQ15386 1083 aa20.35■□□□□ 0.85
SYNE4-207ENST00000505054 SLC4A8Q2Y0W8 1093 aa20.35■□□□□ 0.85
SYNE4-207ENST00000505054 ZNF341Q9BYN7 854 aa20.35■□□□□ 0.85
SYNE4-207ENST00000505054 ARHGAP39Q9C0H5 1083 aa20.35■□□□□ 0.85
SYNE4-207ENST00000505054 PRMT2P55345 433 aa20.34■□□□□ 0.85
SYNE4-207ENST00000505054 PPATQ06203 517 aa20.34■□□□□ 0.85
SYNE4-207ENST00000505054 ZSCAN25Q6NSZ9 544 aa20.34■□□□□ 0.85
SYNE4-207ENST00000505054 SH3BP5LQ7L8J4 393 aa20.34■□□□□ 0.85
SYNE4-207ENST00000505054 MAGEB6P1A0A0J9YX57 407 aa20.33■□□□□ 0.85
SYNE4-207ENST00000505054 CERS3Q8IU89 383 aa20.33■□□□□ 0.85
SYNE4-207ENST00000505054 CCDC136Q96JN2 1154 aa20.33■□□□□ 0.85
SYNE4-207ENST00000505054 FSD1Q9BTV5 496 aa20.33■□□□□ 0.85
SYNE4-207ENST00000505054 ATRNL1Q5VV63 1379 aa20.33■□□□□ 0.84
SYNE4-207ENST00000505054 MGAMO43451 1857 aa20.33■□□□□ 0.84
SYNE4-207ENST00000505054 FLT1P17948 1338 aa20.32■□□□□ 0.84
SYNE4-207ENST00000505054 COL2A1P02458 1487 aaPredicted RBP20.32■□□□□ 0.84
SYNE4-207ENST00000505054 MYH7P12883 1935 aa20.32■□□□□ 0.84
SYNE4-207ENST00000505054 DDTLA6NHG4 134 aaPredicted RBP20.32■□□□□ 0.84
SYNE4-207ENST00000505054 RNF113AO15541 343 aaKnown RBP20.32■□□□□ 0.84
SYNE4-207ENST00000505054 MAPKAPK5Q8IW41 473 aa20.32■□□□□ 0.84
SYNE4-207ENST00000505054 LCORLQ8N3X6 602 aa20.32■□□□□ 0.84
SYNE4-207ENST00000505054 SH3TC2Q8TF17 1288 aa20.32■□□□□ 0.84
SYNE4-207ENST00000505054 TGFBRAP1Q8WUH2 860 aa20.32■□□□□ 0.84
SYNE4-207ENST00000505054 OSBPL5Q9H0X9 879 aaPredicted RBP20.32■□□□□ 0.84
SYNE4-207ENST00000505054 MBD4O95243 580 aa20.31■□□□□ 0.84
SYNE4-207ENST00000505054 INPP5BP32019 993 aa20.31■□□□□ 0.84
SYNE4-207ENST00000505054 ERICH6BQ5W0A0 696 aa20.31■□□□□ 0.84
SYNE4-207ENST00000505054 ANKRD23Q86SG2 305 aa20.31■□□□□ 0.84
SYNE4-207ENST00000505054 EVI5LQ96CN4 794 aa20.31■□□□□ 0.84
SYNE4-207ENST00000505054 PUS7LQ9H0K6 701 aaKnown RBP20.31■□□□□ 0.84
SYNE4-207ENST00000505054 ARMT1Q9H993 441 aa20.31■□□□□ 0.84
SYNE4-207ENST00000505054 ZFYP08048 801 aaPredicted RBP20.3■□□□□ 0.84
SYNE4-207ENST00000505054 C17orf99Q6UX52 265 aa20.3■□□□□ 0.84
SYNE4-207ENST00000505054 MIGA2Q7L4E1 593 aa20.3■□□□□ 0.84
SYNE4-207ENST00000505054 APPBP2Q92624 585 aa20.3■□□□□ 0.84
SYNE4-207ENST00000505054 KCNH4Q9UQ05 1017 aa20.3■□□□□ 0.84
SYNE4-207ENST00000505054 CDK5RAP2Q96SN8 1893 aa20.3■□□□□ 0.84
SYNE4-207ENST00000505054 FOCADQ5VW36 1801 aa20.3■□□□□ 0.84
SYNE4-207ENST00000505054 ADGRA2Q96PE1 1338 aa20.29■□□□□ 0.84
SYNE4-207ENST00000505054 PTPRFP10586 1907 aa20.29■□□□□ 0.84
SYNE4-207ENST00000505054 MYCP01106 439 aaPredicted RBP20.29■□□□□ 0.84
SYNE4-207ENST00000505054 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.84
SYNE4-207ENST00000505054 NOL9Q5SY16 702 aaKnown RBP20.29■□□□□ 0.84
SYNE4-207ENST00000505054 ZSCAN29Q8IWY8 852 aaPredicted RBP20.29■□□□□ 0.84
SYNE4-207ENST00000505054 OSBP2Q969R2 916 aa20.29■□□□□ 0.84
SYNE4-207ENST00000505054 ZNF112Q9UJU3 913 aa20.29■□□□□ 0.84
SYNE4-207ENST00000505054 DOCK1Q14185 1865 aa20.28■□□□□ 0.84
SYNE4-207ENST00000505054 CEP290O15078 2479 aa20.28■□□□□ 0.84
SYNE4-207ENST00000505054 TRIM6-TRIM34B2RNG4 842 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms