RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CFHR5Q9BXR6 569 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 CABP5Q9NP86 173 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 SERPINB13Q9UIV8 391 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 FLT1P17948 1338 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 MYH7P12883 1935 aa11.82□□□□□ -0.52
NR1I3-220ENST00000505005 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
NR1I3-220ENST00000505005 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
NR1I3-220ENST00000505005 PABPC4Q13310 644 aaKnown RBP eCLIP11.82□□□□□ -0.52
NR1I3-220ENST00000505005 SCYL3Q8IZE3 742 aa11.82□□□□□ -0.52
NR1I3-220ENST00000505005 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
NR1I3-220ENST00000505005 OPTNQ96CV9 577 aa11.82□□□□□ -0.52
NR1I3-220ENST00000505005 CCDC17Q96LX7 622 aa11.82□□□□□ -0.52
NR1I3-220ENST00000505005 RIOK1Q9BRS2 568 aaKnown RBP11.82□□□□□ -0.52
NR1I3-220ENST00000505005 LNPKQ9C0E8 428 aa11.82□□□□□ -0.52
NR1I3-220ENST00000505005 HELLSQ9NRZ9 838 aa11.82□□□□□ -0.52
NR1I3-220ENST00000505005 ARPP21Q9UBL0 812 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-220ENST00000505005 TCRBV5S4A2TA0A5A2 114 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-220ENST00000505005 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 VGLL4Q14135 290 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-220ENST00000505005 MIGA2Q7L4E1 593 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 MIGA1Q8NAN2 632 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 MCM9Q9NXL9 1143 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 SCAF8Q9UPN6 1271 aaKnown RBP11.81□□□□□ -0.52
NR1I3-220ENST00000505005 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 SALL3Q9BXA9 1300 aa11.81□□□□□ -0.52
NR1I3-220ENST00000505005 DDTLA6NHG4 134 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-220ENST00000505005 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 PATL2C9JE40 543 aaKnown RBP11.8□□□□□ -0.52
NR1I3-220ENST00000505005 IGHDP01880 384 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 CAP2P40123 477 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 C1QBPQ07021 282 aaKnown RBP11.8□□□□□ -0.52
NR1I3-220ENST00000505005 RUFY2Q8WXA3 655 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 ELP3Q9H9T3 547 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
NR1I3-220ENST00000505005 SLC45A1Q9Y2W3 748 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 SLC4A4Q9Y6R1 1079 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
NR1I3-220ENST00000505005 PHF20L1A8MW92 1017 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 AOC2O75106 756 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 MBD4O95243 580 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 USP14P54578 494 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 SBK1Q52WX2 424 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 DLK2Q6UY11 383 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 MOB2Q70IA6 237 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 ADGRA1Q86SQ6 560 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 CCDC136Q96JN2 1154 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 SH2D4AQ9H788 454 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 DCP1AQ9NPI6 582 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-220ENST00000505005 PNMA3Q9UL41 463 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 KCNH4Q9UQ05 1017 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 NDUFB9Q9Y6M9 179 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 MYH1P12882 1939 aa11.79□□□□□ -0.52
NR1I3-220ENST00000505005 MYO5AQ9Y4I1 1855 aaKnown RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 EIF5BO60841 1220 aaKnown RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 APPP05067 770 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 PCP11498 1178 aaKnown RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 DYNLL1P63167 89 aaKnown RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 PDE4BQ07343 736 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 PKN2Q16513 984 aaKnown RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 CERKLQ49MI3 558 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 MCMDC2Q4G0Z9 681 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 TATDN1Q6P1N9 297 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 PLEKHM2Q8IWE5 1019 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 PROCA1Q8NCQ7 364 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 ZKSCAN4Q969J2 545 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 RILPL2Q969X0 211 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 STRBPQ96SI9 672 aaKnown RBP11.78□□□□□ -0.52
NR1I3-220ENST00000505005 PALD1Q9ULE6 856 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 SNCAIPQ9Y6H5 919 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
NR1I3-220ENST00000505005 CCL15-CCL14A0A0B4J2E2 113 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 GPAA1O43292 621 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 PTPRAP18433 802 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 TDO2P48775 406 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 CCL15Q16663 113 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 ZMYM1Q5SVZ6 1142 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 ANKRD23Q86SG2 305 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 ZFPM1Q8IX07 1006 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 ZNF280CQ8ND82 737 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 GTF3C2Q8WUA4 911 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-220ENST00000505005 WDR18Q9BV38 432 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 ARMT1Q9H993 441 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 DIAPH3Q9NSV4 1193 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 RNF186Q9NXI6 227 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 ZHX2Q9Y6X8 837 aa11.77□□□□□ -0.53
NR1I3-220ENST00000505005 IRF6O14896 467 aa11.76□□□□□ -0.53
NR1I3-220ENST00000505005 TRPA1O75762 1119 aa11.76□□□□□ -0.53
NR1I3-220ENST00000505005 GNRH1P01148 92 aa11.76□□□□□ -0.53
NR1I3-220ENST00000505005 INPP5BP32019 993 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms