RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 FBXL19Q6PCT2 694 aa5.12□□□□□ -1.59
RFC1-209ENST00000504974 RHOVQ96L33 236 aa5.12□□□□□ -1.59
RFC1-209ENST00000504974 HIF3AQ9Y2N7 669 aa5.12□□□□□ -1.59
RFC1-209ENST00000504974 SUPT16HQ9Y5B9 1047 aaKnown RBP5.12□□□□□ -1.59
RFC1-209ENST00000504974 CSADQ9Y600 493 aa5.12□□□□□ -1.59
RFC1-209ENST00000504974 KIAA1324LA8MWY0 1029 aaPredicted RBP5.11□□□□□ -1.59
RFC1-209ENST00000504974 TRIM37O94972 964 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 F13A1P00488 732 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 SPINK2P20155 84 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 ZC3H6P61129 1189 aaKnown RBP5.11□□□□□ -1.59
RFC1-209ENST00000504974 APOBRQ0VD83 1088 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 PAK2Q13177 524 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 GNL2Q13823 731 aaKnown RBP5.11□□□□□ -1.59
RFC1-209ENST00000504974 NAALADL2Q58DX5 795 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 PAOXQ6QHF9 649 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.11□□□□□ -1.59
RFC1-209ENST00000504974 FBXO27Q8NI29 283 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 GAL3ST3Q96A11 431 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 ELMO3Q96BJ8 720 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 OSBPL1AQ9BXW6 950 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 ACSS3Q9H6R3 686 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 LRRC4CQ9HCJ2 640 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 PICK1Q9NRD5 415 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 UBP1Q9NZI7 540 aa5.11□□□□□ -1.59
RFC1-209ENST00000504974 PRAMEF27A3QJZ7 478 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 DCDC2CA8MYV0 355 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 TMPRSS2O15393 492 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 SLFN14P0C7P3 912 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 MCM4P33991 863 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 CDK8P49336 464 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 GP2P55259 537 aaKnown RBP5.1□□□□□ -1.59
RFC1-209ENST00000504974 CDK5R2Q13319 367 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 ZNF765Q7L2R6 523 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 ZAR1Q86SH2 424 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 EZH1Q92800 747 aaPredicted RBP5.1□□□□□ -1.59
RFC1-209ENST00000504974 GPRASP2Q96D09 838 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 C1GALT1Q9NS00 363 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 KRT82Q9NSB4 513 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 ATG3Q9NT62 314 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 PIM2Q9P1W9 311 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 LEMD3Q9Y2U8 911 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 U3KQE9 123 aa5.1□□□□□ -1.59
RFC1-209ENST00000504974 HCLS1P14317 486 aaPredicted RBP5.09□□□□□ -1.59
RFC1-209ENST00000504974 DNAJA1P31689 397 aaKnown RBP5.09□□□□□ -1.59
RFC1-209ENST00000504974 SEZ6Q53EL9 994 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 WIPI1Q5MNZ9 446 aaPredicted RBP5.09□□□□□ -1.59
RFC1-209ENST00000504974 SEZ6L2Q6UXD5 910 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 NFXL1Q6ZNB6 911 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 FAM196AQ6ZSG2 479 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 SLC51AQ86UW1 340 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 C12orf40Q86WS4 652 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 DTX1Q86Y01 620 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 GATAD2BQ8WXI9 593 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 EAF1Q96JC9 268 aaPredicted RBP5.09□□□□□ -1.59
RFC1-209ENST00000504974 FANCD2OSQ96PS1 177 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 DISC1Q9NRI5 854 aa5.09□□□□□ -1.59
RFC1-209ENST00000504974 GRIN3BO60391 1043 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 RNGTTO60942 597 aaKnown RBP5.08□□□□□ -1.6
RFC1-209ENST00000504974 LEFTY1O75610 366 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 NEFMP07197 916 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 GARTP22102 1010 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 CRKP46108 304 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 ID3Q02535 119 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 INPP5AQ14642 412 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 TTLL4Q14679 1199 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 CWF19L2Q2TBE0 894 aaKnown RBP5.08□□□□□ -1.6
RFC1-209ENST00000504974 KIF4BQ2VIQ3 1234 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 LRFN4Q6PJG9 635 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 HDXQ7Z353 690 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 UBE3DQ7Z6J8 389 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 VPS37DQ86XT2 251 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 FAM181AQ8N9Y4 354 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 NKD1Q969G9 470 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 PLPPR2Q96GM1 343 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 GSX1Q9H4S2 264 aaPredicted RBP5.08□□□□□ -1.6
RFC1-209ENST00000504974 CRIM1Q9NZV1 1036 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 PPP1R1BQ9UD71 204 aaPredicted RBP5.08□□□□□ -1.6
RFC1-209ENST00000504974 ZC3H7BQ9UGR2 993 aaKnown RBP5.08□□□□□ -1.6
RFC1-209ENST00000504974 PCDHGC5Q9Y5F6 944 aa5.08□□□□□ -1.6
RFC1-209ENST00000504974 FAM221AA4D161 298 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 CYP26A1O43174 497 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 GREM1O60565 184 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 CILPO75339 1184 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 FOSL1P15407 271 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 GRIK1P39086 918 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 RPL6Q02878 288 aaKnown RBP5.07□□□□□ -1.6
RFC1-209ENST00000504974 MPP2Q14168 576 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 MSMPQ1L6U9 139 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 FBXW10Q5XX13 1052 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 CCDC84Q86UT8 332 aaPredicted RBP5.07□□□□□ -1.6
RFC1-209ENST00000504974 TINF2Q9BSI4 451 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 NT5C1AQ9BXI3 368 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 PIDD1Q9HB75 910 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 EFR3BQ9Y2G0 817 aa5.07□□□□□ -1.6
RFC1-209ENST00000504974 WNT11O96014 354 aa5.06□□□□□ -1.6
RFC1-209ENST00000504974 NASPP49321 788 aaPredicted RBP5.06□□□□□ -1.6
RFC1-209ENST00000504974 ETF1P62495 437 aaKnown RBP5.06□□□□□ -1.6
RFC1-209ENST00000504974 ZC3H12AQ5D1E8 599 aaKnown RBP5.06□□□□□ -1.6
RFC1-209ENST00000504974 PPM1JQ5JR12 505 aa5.06□□□□□ -1.6
RFC1-209ENST00000504974 SCARA3Q6AZY7 606 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms