RNA–Protein interactions for RNA: ENST00000504441.6

PAAF1-204, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-204ENST00000504441 NEUROD6Q96NK8 337 aa17.45■□□□□ 0.38
PAAF1-204ENST00000504441 GDF15Q99988 308 aa17.45■□□□□ 0.38
PAAF1-204ENST00000504441 NBPF3Q9H094 633 aa17.45■□□□□ 0.38
PAAF1-204ENST00000504441 ASCC2Q9H1I8 757 aaPredicted RBP17.45■□□□□ 0.38
PAAF1-204ENST00000504441 TBC1D12O60347 775 aa17.44■□□□□ 0.38
PAAF1-204ENST00000504441 TFCP2Q12800 502 aa17.44■□□□□ 0.38
PAAF1-204ENST00000504441 PABPC4Q13310 644 aaKnown RBP eCLIP17.44■□□□□ 0.38
PAAF1-204ENST00000504441 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
PAAF1-204ENST00000504441 TBC1D9Q6ZT07 1266 aa17.44■□□□□ 0.38
PAAF1-204ENST00000504441 DEFB123Q8N688 67 aa17.44■□□□□ 0.38
PAAF1-204ENST00000504441 OSBPL5Q9H0X9 879 aaPredicted RBP17.44■□□□□ 0.38
PAAF1-204ENST00000504441 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
PAAF1-204ENST00000504441 NOB1Q9ULX3 412 aaKnown RBP17.44■□□□□ 0.38
PAAF1-204ENST00000504441 ALPK3Q96L96 1907 aa17.44■□□□□ 0.38
PAAF1-204ENST00000504441 RPTORQ8N122 1335 aa17.44■□□□□ 0.38
PAAF1-204ENST00000504441 PEX10O60683 326 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 CYP2B6P20813 491 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 CAP2P40123 477 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 RRP1BQ14684 758 aaKnown RBP17.43■□□□□ 0.38
PAAF1-204ENST00000504441 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
PAAF1-204ENST00000504441 PI16Q6UXB8 463 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 Q7L0L9 218 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 ANKLE1Q8NAG6 615 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 ZNF384Q8TF68 577 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 C11orf49Q9H6J7 331 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 RAI14Q9P0K7 980 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 GJD2Q9UKL4 321 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 DOCK3Q8IZD9 2030 aa17.43■□□□□ 0.38
PAAF1-204ENST00000504441 PDS5AQ29RF7 1337 aaKnown RBP17.43■□□□□ 0.38
PAAF1-204ENST00000504441 USP17L5A8MUK1 530 aa17.42■□□□□ 0.38
PAAF1-204ENST00000504441 IRX3P78415 501 aaPredicted RBP17.42■□□□□ 0.38
PAAF1-204ENST00000504441 GSTO1P78417 241 aa17.42■□□□□ 0.38
PAAF1-204ENST00000504441 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
PAAF1-204ENST00000504441 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
PAAF1-204ENST00000504441 TRIB2Q92519 343 aa17.42■□□□□ 0.38
PAAF1-204ENST00000504441 CDCA7LQ96GN5 454 aa17.42■□□□□ 0.38
PAAF1-204ENST00000504441 MEIS3Q99687 375 aa17.42■□□□□ 0.38
PAAF1-204ENST00000504441 LDHCP07864 332 aa17.41■□□□□ 0.38
PAAF1-204ENST00000504441 BMP8BP34820 402 aa17.41■□□□□ 0.38
PAAF1-204ENST00000504441 MAGEA10P43363 369 aaPredicted RBP17.41■□□□□ 0.38
PAAF1-204ENST00000504441 MTMR2Q13614 643 aa17.41■□□□□ 0.38
PAAF1-204ENST00000504441 SPATA5Q8NB90 893 aa17.41■□□□□ 0.38
PAAF1-204ENST00000504441 AS3MTQ9HBK9 375 aa17.41■□□□□ 0.38
PAAF1-204ENST00000504441 HMG20BQ9P0W2 317 aa17.41■□□□□ 0.38
PAAF1-204ENST00000504441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.41■□□□□ 0.38
PAAF1-204ENST00000504441 DDX60LQ5H9U9 1706 aaKnown RBP17.41■□□□□ 0.38
PAAF1-204ENST00000504441 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
PAAF1-204ENST00000504441 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
PAAF1-204ENST00000504441 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
PAAF1-204ENST00000504441 PRKAR2AP13861 404 aaKnown RBP17.4■□□□□ 0.38
PAAF1-204ENST00000504441 MNX1P50219 401 aaPredicted RBP17.4■□□□□ 0.38
PAAF1-204ENST00000504441 TEX11Q8IYF3 940 aa17.4■□□□□ 0.38
PAAF1-204ENST00000504441 NSUN4Q96CB9 384 aaKnown RBP17.4■□□□□ 0.38
PAAF1-204ENST00000504441 UBE2OQ9C0C9 1292 aaKnown RBP17.4■□□□□ 0.38
PAAF1-204ENST00000504441 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
PAAF1-204ENST00000504441 ZBTB22O15209 634 aa17.39■□□□□ 0.37
PAAF1-204ENST00000504441 TDHQ8IZJ6 230 aa17.39■□□□□ 0.37
PAAF1-204ENST00000504441 SH3RF3Q8TEJ3 882 aaPredicted RBP17.39■□□□□ 0.37
PAAF1-204ENST00000504441 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.37
PAAF1-204ENST00000504441 API5Q9BZZ5 524 aaKnown RBP17.39■□□□□ 0.37
PAAF1-204ENST00000504441 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.37
PAAF1-204ENST00000504441 OGDHLQ9ULD0 1010 aa17.39■□□□□ 0.37
PAAF1-204ENST00000504441 ATAD5Q96QE3 1844 aa17.39■□□□□ 0.37
PAAF1-204ENST00000504441 SH3D19Q5HYK7 790 aa17.38■□□□□ 0.37
PAAF1-204ENST00000504441 CCAR1Q8IX12 1150 aaKnown RBP17.38■□□□□ 0.37
PAAF1-204ENST00000504441 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
PAAF1-204ENST00000504441 NUDT12Q9BQG2 462 aa17.38■□□□□ 0.37
PAAF1-204ENST00000504441 NOL10Q9BSC4 688 aaKnown RBP17.38■□□□□ 0.37
PAAF1-204ENST00000504441 MORF4L1Q9UBU8 362 aa17.38■□□□□ 0.37
PAAF1-204ENST00000504441 HERC5Q9UII4 1024 aaKnown RBP17.38■□□□□ 0.37
PAAF1-204ENST00000504441 LAMA3Q16787 3333 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 BACE1P56817 501 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 GPRC5AQ8NFJ5 357 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 TRIM34Q9BYJ4 488 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 TXNRD2Q9NNW7 524 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 AATFQ9NY61 560 aaKnown RBP eCLIP17.37■□□□□ 0.37
PAAF1-204ENST00000504441 PI4KBQ9UBF8 816 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 PFASO15067 1338 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 COL6A3P12111 3177 aa17.37■□□□□ 0.37
PAAF1-204ENST00000504441 COL2A1P02458 1487 aaPredicted RBP17.37■□□□□ 0.37
PAAF1-204ENST00000504441 ZNF316A6NFI3 1004 aaPredicted RBP17.36■□□□□ 0.37
PAAF1-204ENST00000504441 MAP4K4O95819 1239 aaPredicted RBP17.36■□□□□ 0.37
PAAF1-204ENST00000504441 ZKSCAN1P17029 563 aaPredicted RBP17.36■□□□□ 0.37
PAAF1-204ENST00000504441 HERVK_113P62684 666 aa17.36■□□□□ 0.37
PAAF1-204ENST00000504441 JAG1P78504 1218 aa17.36■□□□□ 0.37
PAAF1-204ENST00000504441 SHROOM1Q2M3G4 852 aaPredicted RBP17.36■□□□□ 0.37
PAAF1-204ENST00000504441 LRIT3Q3SXY7 679 aa17.36■□□□□ 0.37
PAAF1-204ENST00000504441 GPR153Q6NV75 609 aa17.36■□□□□ 0.37
PAAF1-204ENST00000504441 CRACR2BQ8N4Y2 399 aaPredicted RBP17.36■□□□□ 0.37
PAAF1-204ENST00000504441 SOCS4Q8WXH5 440 aa17.36■□□□□ 0.37
PAAF1-204ENST00000504441 PAGR1Q9BTK6 254 aa17.36■□□□□ 0.37
PAAF1-204ENST00000504441 PLXNB2O15031 1838 aa17.35■□□□□ 0.37
PAAF1-204ENST00000504441 GDF11O95390 407 aa17.35■□□□□ 0.37
PAAF1-204ENST00000504441 ASNSP08243 561 aa17.35■□□□□ 0.37
PAAF1-204ENST00000504441 CCND3P30281 292 aaPredicted RBP17.35■□□□□ 0.37
PAAF1-204ENST00000504441 MCAMP43121 646 aa17.35■□□□□ 0.37
PAAF1-204ENST00000504441 MDM2Q00987 491 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms