RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 UBE2Q2LH0YL09 131 aa15.85■□□□□ 0.13
PDLIM7-212ENST00000504380 USP2O75604 605 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-212ENST00000504380 FGAP02671 866 aa15.85■□□□□ 0.13
PDLIM7-212ENST00000504380 NF2P35240 595 aa15.85■□□□□ 0.13
PDLIM7-212ENST00000504380 CASC1Q6TDU7 716 aa15.85■□□□□ 0.13
PDLIM7-212ENST00000504380 NACAP1Q9BZK3 213 aa15.85■□□□□ 0.13
PDLIM7-212ENST00000504380 DHX36Q9H2U1 1008 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-212ENST00000504380 ANGEL1Q9UNK9 670 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-212ENST00000504380 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 C12orf60Q5U649 245 aa15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 GIMAP6Q6P9H5 292 aa15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 TTC6Q86TZ1 520 aa15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 CRACR2BQ8N4Y2 399 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 SLC44A5Q8NCS7 719 aa15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 DNAJC18Q9H819 358 aa15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 GBA2Q9HCG7 927 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 PI4KBQ9UBF8 816 aa15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 COL2A1P02458 1487 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-212ENST00000504380 HAND2P61296 217 aa15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 CTDSPL2Q05D32 466 aa15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 RRP1BQ14684 758 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 ALX1Q15699 326 aa15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 SBK1Q52WX2 424 aa15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 DSCC1Q9BVC3 393 aa15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 LSG1Q9H089 658 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 ANO2Q9NQ90 1003 aa15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 ARPP21Q9UBL0 812 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 TACC3Q9Y6A5 838 aa15.83■□□□□ 0.12
PDLIM7-212ENST00000504380 INPP5BP32019 993 aa15.82■□□□□ 0.12
PDLIM7-212ENST00000504380 SHROOM1Q2M3G4 852 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-212ENST00000504380 KIAA1211Q6ZU35 1233 aa15.82■□□□□ 0.12
PDLIM7-212ENST00000504380 FOXP4Q8IVH2 680 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-212ENST00000504380 C2orf69Q8N8R5 385 aa15.82■□□□□ 0.12
PDLIM7-212ENST00000504380 ZNF341Q9BYN7 854 aa15.82■□□□□ 0.12
PDLIM7-212ENST00000504380 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
PDLIM7-212ENST00000504380 TMEM88BA6NKF7 163 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 PHF20L1A8MW92 1017 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 FOXN1O15353 648 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 PPP1R12BO60237 982 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 GABPAQ06546 454 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 PPARAQ07869 468 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 DCAF15Q66K64 600 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 ARMC9Q7Z3E5 817 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 AMOTL1Q8IY63 956 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 ZKSCAN4Q969J2 545 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 CLMNQ96JQ2 1002 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 WRNIP1Q96S55 665 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 TRIM34Q9BYJ4 488 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 SERPINB13Q9UIV8 391 aa15.81■□□□□ 0.12
PDLIM7-212ENST00000504380 LAMB1P07942 1786 aa15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 TBC1D12O60347 775 aa15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 SHMT1P34896 483 aa15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 CDK8P49336 464 aa15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 JAG1P78504 1218 aa15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 MAP3K10Q02779 954 aa15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 METTL16Q86W50 562 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 HOOK2Q96ED9 719 aa15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 NBPF3Q9H094 633 aa15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 ABT1Q9ULW3 272 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 RBM8AQ9Y5S9 174 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-212ENST00000504380 PRDM1O75626 825 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 GDF11O95390 407 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 SEC24BO95487 1268 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 IREB2P48200 963 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 HUNKP57058 714 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 MAP3K9P80192 1104 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 C8orf34Q49A92 452 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 C16orf86Q6ZW13 317 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 CCDC84Q86UT8 332 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 TBC1D10CQ8IV04 446 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 MAP4K1Q92918 833 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 EHD4Q9H223 541 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 HERC5Q9UII4 1024 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 ZNF112Q9UJU3 913 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 TAF6LQ9Y6J9 622 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 PAPPA2Q9BXP8 1791 aa15.79■□□□□ 0.12
PDLIM7-212ENST00000504380 OTOFQ9HC10 1997 aa15.78■□□□□ 0.12
PDLIM7-212ENST00000504380 MAP3K11Q16584 847 aa15.78■□□□□ 0.12
PDLIM7-212ENST00000504380 LDLRAD1Q5T700 205 aa15.78■□□□□ 0.12
PDLIM7-212ENST00000504380 SAPCD2Q86UD0 394 aa15.78■□□□□ 0.12
PDLIM7-212ENST00000504380 NKX2-3Q8TAU0 364 aa15.78■□□□□ 0.12
PDLIM7-212ENST00000504380 ELP3Q9H9T3 547 aa15.78■□□□□ 0.12
PDLIM7-212ENST00000504380 TLL2Q9Y6L7 1015 aa15.78■□□□□ 0.12
PDLIM7-212ENST00000504380 ZMYM6O95789 1325 aa15.77■□□□□ 0.12
PDLIM7-212ENST00000504380 ZNF213O14771 459 aa15.77■□□□□ 0.12
PDLIM7-212ENST00000504380 FKBP1BP68106 108 aa15.77■□□□□ 0.12
PDLIM7-212ENST00000504380 VGLL4Q14135 290 aa15.77■□□□□ 0.12
PDLIM7-212ENST00000504380 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
PDLIM7-212ENST00000504380 CTNNA3Q9UI47 895 aa15.77■□□□□ 0.12
PDLIM7-212ENST00000504380 ANAPC4Q9UJX5 808 aa15.77■□□□□ 0.12
PDLIM7-212ENST00000504380 ROBO3Q96MS0 1386 aa15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 CYP21A2P08686 494 aa15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 AKR1B1P15121 316 aa15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 CAP2P40123 477 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms