RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 SLC39A14Q15043 492 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 KRT40Q6A162 431 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 SMIM5Q71RC9 77 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 ZNF654Q8IZM8 581 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 CRACR2BQ8N4Y2 399 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-210ENST00000504289 FAM200AQ8TCP9 573 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 SDR42E1Q8WUS8 393 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 ANKS1AQ92625 1134 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 FOXP1Q9H334 677 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-210ENST00000504289 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
COL1A1-210ENST00000504289 TOMM22Q9NS69 142 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 TACC3Q9Y6A5 838 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
COL1A1-210ENST00000504289 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-210ENST00000504289 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 NRXN2Q9P2S2 1712 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 ESPNB1AK53 854 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 USP17L21D6R901 530 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 SPTLC2O15270 562 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 KLRK1P26718 216 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 PRDX5P30044 214 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 ME1P48163 572 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 DYNLL1P63167 89 aaKnown RBP11.36□□□□□ -0.59
COL1A1-210ENST00000504289 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-210ENST00000504289 STK38Q15208 465 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
COL1A1-210ENST00000504289 ANO1Q5XXA6 986 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 CCAR1Q8IX12 1150 aaKnown RBP11.36□□□□□ -0.59
COL1A1-210ENST00000504289 PROM2Q8N271 834 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 ENGASEQ8NFI3 743 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 MRPS27Q92552 414 aaKnown RBP11.36□□□□□ -0.59
COL1A1-210ENST00000504289 AKT1S1Q96B36 256 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 CD209Q9NNX6 404 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 TCP11L1Q9NUJ3 509 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 CCDC39Q9UFE4 941 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
COL1A1-210ENST00000504289 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
COL1A1-210ENST00000504289 TNKSO95271 1327 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 FAM237AA0A1B0GTK4 181 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 WTIPA6NIX2 430 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 PRPF3O43395 683 aaKnown RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 RANBP6O60518 1105 aaKnown RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 KINO60870 393 aaKnown RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 UFL1O94874 794 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 NPR1P16066 1061 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 CMA1P23946 247 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 CLCN1P35523 988 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 PDE6BP35913 854 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 GPSM2P81274 684 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 TYRO3Q06418 890 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 DDR1Q08345 913 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 SF3A1Q15459 793 aaKnown RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 RILPL1Q5EBL4 403 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 IFIT1BQ5T764 474 aaKnown RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 SASS6Q6UVJ0 657 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 TXNRD3Q86VQ6 643 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 ZSCAN30Q86W11 494 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 DGKHQ86XP1 1220 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 ELOA2Q8IYF1 753 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 ENAHQ8N8S7 591 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-210ENST00000504289 TIGD1Q96MW7 591 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 COA1Q9GZY4 146 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 ATP6V0A2Q9Y487 856 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 LAMB1P07942 1786 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 MROH7-TTC4A0A0A0MT08 1334 aa11.35□□□□□ -0.59
COL1A1-210ENST00000504289 GPR75-ASB3A0A0A6YYF3 556 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 DTNBO60941 627 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 NR1I2O75469 434 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 BMP15O95972 392 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 MMP1P03956 469 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 TPM3P06753 285 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 KIF5BP33176 963 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 GUCY1B3Q02153 619 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 GNL2Q13823 731 aaKnown RBP11.34□□□□□ -0.59
COL1A1-210ENST00000504289 NOSTRINQ8IVI9 506 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 TBC1D16Q8TBP0 767 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL1A1-210ENST00000504289 SLC26A6Q9BXS9 759 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
COL1A1-210ENST00000504289 SENP2Q9HC62 589 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 AATFQ9NY61 560 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL1A1-210ENST00000504289 USP25Q9UHP3 1055 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 PCDHA7Q9UN72 937 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 CEP131Q9UPN4 1083 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 GAKO14976 1311 aa11.34□□□□□ -0.59
COL1A1-210ENST00000504289 LTBP1Q14766 1721 aa11.33□□□□□ -0.6
COL1A1-210ENST00000504289 GNAQP50148 359 aa11.33□□□□□ -0.6
COL1A1-210ENST00000504289 TROAPQ12815 778 aa11.33□□□□□ -0.6
COL1A1-210ENST00000504289 SNW1Q13573 536 aaKnown RBP11.33□□□□□ -0.6
COL1A1-210ENST00000504289 FMR1NBQ8N0W7 255 aaPredicted RBP11.33□□□□□ -0.6
COL1A1-210ENST00000504289 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
COL1A1-210ENST00000504289 FSIP1Q8NA03 581 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms