RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 UBXN4Q92575 508 aa7.62□□□□□ -1.19
TRAPPC13-205ENST00000504243 ATXN3LQ9H3M9 355 aa7.62□□□□□ -1.19
TRAPPC13-205ENST00000504243 GINM1Q9NU53 330 aa7.62□□□□□ -1.19
TRAPPC13-205ENST00000504243 CRIM1Q9NZV1 1036 aa7.62□□□□□ -1.19
TRAPPC13-205ENST00000504243 PPP1R9AQ9ULJ8 1098 aa7.62□□□□□ -1.19
TRAPPC13-205ENST00000504243 FAM95CA0A1B0GW59 222 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 STK10O94804 968 aaKnown RBP7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 FSTP19883 344 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 CRKP46108 304 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 MAP7Q14244 749 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 CDPF1Q6NVV7 123 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 PAOXQ6QHF9 649 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 RASGRP4Q8TDF6 673 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 EZH1Q92800 747 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 SEC16BQ96JE7 1060 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 C7orf69Q9H7B7 122 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 KCNQ5Q9NR82 932 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 PCDHGC5Q9Y5F6 944 aa7.61□□□□□ -1.19
TRAPPC13-205ENST00000504243 ROBO2Q9HCK4 1378 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 PTPN11Q06124 597 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 MPP2Q14168 576 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 FBLIM1Q8WUP2 373 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 ELMO3Q96BJ8 720 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 FERD3LQ96RJ6 166 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 GMLQ99445 158 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 DNAJC2Q99543 621 aaKnown RBP7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 PIDD1Q9HB75 910 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 PICK1Q9NRD5 415 aa7.6□□□□□ -1.19
TRAPPC13-205ENST00000504243 HMX2A2RU54 273 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 IGLV1-40P01703 118 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 ERVK-24P63145 666 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 COL9A2Q14055 689 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 NFKBIBQ15653 356 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 ZC3H12AQ5D1E8 599 aaKnown RBP7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 RNF43Q68DV7 783 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 GK5Q6ZS86 529 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 MCF2L2Q86YR7 1114 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 GAL3ST3Q96A11 431 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 ACSS3Q9H6R3 686 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 BRMS1Q9HCU9 246 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 FAM105AQ9NUU6 356 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 MRVI1Q9Y6F6 885 aa7.59□□□□□ -1.19
TRAPPC13-205ENST00000504243 FAM221AA4D161 298 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 GRIN3BO60391 1043 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 CILPO75339 1184 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 RAB6AP20340 208 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 ZNF165P49910 485 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 RPL6Q02878 288 aaKnown RBP7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 NFIAQ12857 509 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 WIPI1Q5MNZ9 446 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 CCDC81Q6ZN84 652 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 HDXQ7Z353 690 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 REC114Q7Z4M0 266 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 GIMAP7Q8NHV1 300 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 PMFBP1Q8TBY8 1022 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 ANAPC16Q96DE5 110 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 CRBNQ96SW2 442 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 DBNDD2Q9BQY9 259 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 DISC1Q9NRI5 854 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 CSADQ9Y600 493 aa7.58□□□□□ -1.2
TRAPPC13-205ENST00000504243 DCDC2CA8MYV0 355 aa7.57□□□□□ -1.2
TRAPPC13-205ENST00000504243 FGRP09769 529 aa7.57□□□□□ -1.2
TRAPPC13-205ENST00000504243 CDK8P49336 464 aa7.57□□□□□ -1.2
TRAPPC13-205ENST00000504243 SLITRK4Q8IW52 837 aa7.57□□□□□ -1.2
TRAPPC13-205ENST00000504243 SEMA6CQ9H3T2 930 aa7.57□□□□□ -1.2
TRAPPC13-205ENST00000504243 PPT2Q9UMR5 302 aa7.57□□□□□ -1.2
TRAPPC13-205ENST00000504243 PRAMEF27A3QJZ7 478 aa7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 NFICP08651 508 aa7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 ITGB7P26010 798 aa7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 INPP5AQ14642 412 aa7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 SMYD4Q8IYR2 804 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 PLPPR2Q96GM1 343 aa7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 HIRIP3Q9BW71 556 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 SRRTQ9BXP5 876 aaKnown RBP7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 R3HCC1Q9Y3T6 440 aaKnown RBP7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 PCDHB14Q9Y5E9 798 aa7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 SNCAIPQ9Y6H5 919 aa7.56□□□□□ -1.2
TRAPPC13-205ENST00000504243 RNGTTO60942 597 aaKnown RBP7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 SOX9P48436 509 aa7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 TTLL4Q14679 1199 aa7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 LRFN4Q6PJG9 635 aa7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 C12orf40Q86WS4 652 aa7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 LRRC3Q9BY71 257 aa7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 PCOLCE2Q9UKZ9 415 aa7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 STRIP2Q9ULQ0 834 aa7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 DAGLAQ9Y4D2 1042 aa7.55□□□□□ -1.2
TRAPPC13-205ENST00000504243 FANCGO15287 622 aa7.54□□□□□ -1.2
TRAPPC13-205ENST00000504243 EIF6P56537 245 aaKnown RBP7.54□□□□□ -1.2
TRAPPC13-205ENST00000504243 CLCQ05315 142 aa7.54□□□□□ -1.2
TRAPPC13-205ENST00000504243 CKAP2LQ8IYA6 745 aa7.54□□□□□ -1.2
TRAPPC13-205ENST00000504243 SSU72Q9NP77 194 aaKnown RBP7.54□□□□□ -1.2
TRAPPC13-205ENST00000504243 HCLS1P14317 486 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 ETF1P62495 437 aaKnown RBP7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 RING1Q06587 406 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 MLECQ14165 292 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 PPM1JQ5JR12 505 aa7.53□□□□□ -1.2
TRAPPC13-205ENST00000504243 KCT2Q8NC54 265 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms