RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 GCC1Q96CN9 775 aa21.68■■□□□ 1.06
NFKB1-204ENST00000504044 ABHD8Q96I13 439 aa21.68■■□□□ 1.06
NFKB1-204ENST00000504044 KCNH4Q9UQ05 1017 aa21.68■■□□□ 1.06
NFKB1-204ENST00000504044 ZHX2Q9Y6X8 837 aa21.68■■□□□ 1.06
NFKB1-204ENST00000504044 OTOFQ9HC10 1997 aa21.67■■□□□ 1.06
NFKB1-204ENST00000504044 AK9Q5TCS8 1911 aa21.67■■□□□ 1.06
NFKB1-204ENST00000504044 CAPN15O75808 1086 aa21.67■■□□□ 1.06
NFKB1-204ENST00000504044 PTPRAP18433 802 aa21.67■■□□□ 1.06
NFKB1-204ENST00000504044 DYNLL1P63167 89 aaKnown RBP21.67■■□□□ 1.06
NFKB1-204ENST00000504044 FASTKD5Q7L8L6 764 aaKnown RBP21.67■■□□□ 1.06
NFKB1-204ENST00000504044 ERO1AQ96HE7 468 aa21.67■■□□□ 1.06
NFKB1-204ENST00000504044 PTPN18Q99952 460 aa21.67■■□□□ 1.06
NFKB1-204ENST00000504044 GINM1Q9NU53 330 aa21.67■■□□□ 1.06
NFKB1-204ENST00000504044 ZNF532Q9HCE3 1301 aa21.66■■□□□ 1.06
NFKB1-204ENST00000504044 CRHR2Q13324 411 aa21.66■■□□□ 1.06
NFKB1-204ENST00000504044 ANKRD23Q86SG2 305 aa21.66■■□□□ 1.06
NFKB1-204ENST00000504044 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
NFKB1-204ENST00000504044 AS3MTQ9HBK9 375 aa21.66■■□□□ 1.06
NFKB1-204ENST00000504044 TTC41PQ6P2S7 1318 aa21.65■■□□□ 1.06
NFKB1-204ENST00000504044 HDAC1Q13547 482 aaPredicted RBP21.65■■□□□ 1.06
NFKB1-204ENST00000504044 DOCK2Q92608 1830 aa21.64■■□□□ 1.06
NFKB1-204ENST00000504044 BTBD19C9JJ37 291 aa21.64■■□□□ 1.05
NFKB1-204ENST00000504044 UBE3CQ15386 1083 aa21.64■■□□□ 1.05
NFKB1-204ENST00000504044 AMOTL1Q8IY63 956 aa21.64■■□□□ 1.05
NFKB1-204ENST00000504044 FAM43AQ8N2R8 423 aa21.64■■□□□ 1.05
NFKB1-204ENST00000504044 RWDD1Q9H446 243 aaPredicted RBP21.64■■□□□ 1.05
NFKB1-204ENST00000504044 SAP30BPQ9UHR5 308 aaKnown RBP21.64■■□□□ 1.05
NFKB1-204ENST00000504044 PALD1Q9ULE6 856 aa21.64■■□□□ 1.05
NFKB1-204ENST00000504044 POLR3DP05423 398 aaPredicted RBP21.63■■□□□ 1.05
NFKB1-204ENST00000504044 ASNSP08243 561 aa21.63■■□□□ 1.05
NFKB1-204ENST00000504044 ADD2P35612 726 aa21.63■■□□□ 1.05
NFKB1-204ENST00000504044 CAP2P40123 477 aa21.63■■□□□ 1.05
NFKB1-204ENST00000504044 SP3Q02447 781 aa21.63■■□□□ 1.05
NFKB1-204ENST00000504044 KIF22Q14807 665 aa21.63■■□□□ 1.05
NFKB1-204ENST00000504044 PARK7Q99497 189 aaKnown RBP21.63■■□□□ 1.05
NFKB1-204ENST00000504044 RIOK1Q9BRS2 568 aaKnown RBP21.63■■□□□ 1.05
NFKB1-204ENST00000504044 FAM196BA6NMK8 535 aa21.62■■□□□ 1.05
NFKB1-204ENST00000504044 USP17L5A8MUK1 530 aa21.62■■□□□ 1.05
NFKB1-204ENST00000504044 GLRX3O76003 335 aaKnown RBP21.62■■□□□ 1.05
NFKB1-204ENST00000504044 EHD4Q9H223 541 aa21.62■■□□□ 1.05
NFKB1-204ENST00000504044 SERPINB13Q9UIV8 391 aa21.62■■□□□ 1.05
NFKB1-204ENST00000504044 TAOK2Q9UL54 1235 aa21.62■■□□□ 1.05
NFKB1-204ENST00000504044 AFG3L2Q9Y4W6 797 aa21.62■■□□□ 1.05
NFKB1-204ENST00000504044 A0A0G2JLL6 359 aaPredicted RBP21.61■■□□□ 1.05
NFKB1-204ENST00000504044 PDHXO00330 501 aa21.61■■□□□ 1.05
NFKB1-204ENST00000504044 TLR2O60603 784 aa21.61■■□□□ 1.05
NFKB1-204ENST00000504044 ZFYP08048 801 aaPredicted RBP21.61■■□□□ 1.05
NFKB1-204ENST00000504044 ANKRD45Q5TZF3 282 aa21.61■■□□□ 1.05
NFKB1-204ENST00000504044 PRRT2Q7Z6L0 340 aaPredicted RBP21.61■■□□□ 1.05
NFKB1-204ENST00000504044 METTL16Q86W50 562 aaKnown RBP21.61■■□□□ 1.05
NFKB1-204ENST00000504044 EDC3Q96F86 508 aaKnown RBP21.61■■□□□ 1.05
NFKB1-204ENST00000504044 TCRBV5S4A2TA0A5A2 114 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 TRIM75PA6NK02 468 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 CCDC85CA6NKD9 419 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 PABPC4Q13310 644 aaKnown RBP eCLIP21.6■■□□□ 1.05
NFKB1-204ENST00000504044 GADL1Q6ZQY3 521 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 ZNF280CQ8ND82 737 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 R3HDMLQ9H3Y0 253 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 MCM9Q9NXL9 1143 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 SLC45A1Q9Y2W3 748 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 LAMB1P07942 1786 aa21.6■■□□□ 1.05
NFKB1-204ENST00000504044 MX1P20591 662 aa21.59■■□□□ 1.05
NFKB1-204ENST00000504044 KBTBD3Q8NAB2 608 aa21.59■■□□□ 1.05
NFKB1-204ENST00000504044 ATP8A2Q9NTI2 1148 aa21.59■■□□□ 1.05
NFKB1-204ENST00000504044 PNMA3Q9UL41 463 aa21.59■■□□□ 1.05
NFKB1-204ENST00000504044 CASP8AP2Q9UKL3 1982 aa21.58■■□□□ 1.05
NFKB1-204ENST00000504044 MBD4O95243 580 aa21.58■■□□□ 1.05
NFKB1-204ENST00000504044 FBXO46Q6PJ61 603 aaPredicted RBP21.58■■□□□ 1.05
NFKB1-204ENST00000504044 PROCA1Q8NCQ7 364 aaPredicted RBP21.58■■□□□ 1.05
NFKB1-204ENST00000504044 EFCC1Q9HA90 598 aa21.58■■□□□ 1.05
NFKB1-204ENST00000504044 CABP5Q9NP86 173 aa21.58■■□□□ 1.05
NFKB1-204ENST00000504044 TRIM17Q9Y577 477 aa21.58■■□□□ 1.05
NFKB1-204ENST00000504044 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.05
NFKB1-204ENST00000504044 LCORLQ8N3X6 602 aa21.57■■□□□ 1.04
NFKB1-204ENST00000504044 ARMT1Q9H993 441 aa21.57■■□□□ 1.04
NFKB1-204ENST00000504044 SLURP2P0DP57 97 aa21.56■■□□□ 1.04
NFKB1-204ENST00000504044 SPP2Q13103 211 aa21.56■■□□□ 1.04
NFKB1-204ENST00000504044 SLC4A8Q2Y0W8 1093 aa21.56■■□□□ 1.04
NFKB1-204ENST00000504044 CD99L2Q8TCZ2 262 aa21.56■■□□□ 1.04
NFKB1-204ENST00000504044 WDR18Q9BV38 432 aa21.56■■□□□ 1.04
NFKB1-204ENST00000504044 DCP1AQ9NPI6 582 aaPredicted RBP21.56■■□□□ 1.04
NFKB1-204ENST00000504044 TMOD4Q9NZQ9 345 aa21.56■■□□□ 1.04
NFKB1-204ENST00000504044 AGTPBP1Q9UPW5 1226 aa21.56■■□□□ 1.04
NFKB1-204ENST00000504044 C19orf81C9J6K1 198 aa21.55■■□□□ 1.04
NFKB1-204ENST00000504044 GNRH1P01148 92 aa21.55■■□□□ 1.04
NFKB1-204ENST00000504044 CERKLQ49MI3 558 aaPredicted RBP21.55■■□□□ 1.04
NFKB1-204ENST00000504044 SMCR8Q8TEV9 937 aaPredicted RBP21.55■■□□□ 1.04
NFKB1-204ENST00000504044 SDR42E1Q8WUS8 393 aa21.55■■□□□ 1.04
NFKB1-204ENST00000504044 APPBP2Q92624 585 aa21.55■■□□□ 1.04
NFKB1-204ENST00000504044 SWAP70Q9UH65 585 aa21.55■■□□□ 1.04
NFKB1-204ENST00000504044 ZBTB21Q9ULJ3 1066 aa21.55■■□□□ 1.04
NFKB1-204ENST00000504044 RNF113AO15541 343 aaKnown RBP21.54■■□□□ 1.04
NFKB1-204ENST00000504044 GDF11O95390 407 aa21.54■■□□□ 1.04
NFKB1-204ENST00000504044 GNAT2P19087 354 aa21.54■■□□□ 1.04
NFKB1-204ENST00000504044 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
NFKB1-204ENST00000504044 TATDN1Q6P1N9 297 aa21.54■■□□□ 1.04
NFKB1-204ENST00000504044 OTOP1Q7RTM1 612 aa21.54■■□□□ 1.04
NFKB1-204ENST00000504044 DNAJC18Q9H819 358 aa21.54■■□□□ 1.04
NFKB1-204ENST00000504044 SLC4A4Q9Y6R1 1079 aa21.54■■□□□ 1.04
NFKB1-204ENST00000504044 DOCK1Q14185 1865 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms