RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 FPGT-TNNI3KV9GXZ4 949 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 COL4A5P29400 1685 aa11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 ZNF646O15015 1829 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-207ENST00000503974 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.63
PDLIM5-207ENST00000503974 SNAP23O00161 211 aa11.08□□□□□ -0.63
PDLIM5-207ENST00000503974 RPS6KA3P51812 740 aa11.08□□□□□ -0.63
PDLIM5-207ENST00000503974 NAA30Q147X3 362 aaPredicted RBP11.08□□□□□ -0.63
PDLIM5-207ENST00000503974 MFSD4BQ5TF39 518 aa11.08□□□□□ -0.63
PDLIM5-207ENST00000503974 ZNF483Q8TF39 744 aaPredicted RBP11.08□□□□□ -0.63
PDLIM5-207ENST00000503974 MMTAG2Q9BU76 263 aaKnown RBP11.08□□□□□ -0.63
PDLIM5-207ENST00000503974 SUN2Q9UH99 717 aa11.08□□□□□ -0.63
PDLIM5-207ENST00000503974 PSME4Q14997 1843 aa11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 SGSM2O43147 1006 aa11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 GRIN3BO60391 1043 aa11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 PRELPP51888 382 aa11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 EYA3Q99504 573 aa11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 ZSCAN16Q9H4T2 348 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 TTC12Q9H892 705 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 GOPCQ9HD26 462 aa11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 CHCHD3Q9NX63 227 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-207ENST00000503974 EIF3CLB5ME19 914 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 OATP04181 439 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 IFIT1P09914 478 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 SLC5A1P13866 664 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 NAT1P18440 290 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 KLRK1P26718 216 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 TPM4P67936 248 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 NUCB1Q02818 461 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 TIAM2Q8IVF5 1701 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 TEX11Q8IYF3 940 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 CLASRPQ8N2M8 674 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 KCNB2Q92953 911 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 SMARCE1Q969G3 411 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 EIF3CQ99613 913 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 V9GYY5 206 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 SALL3Q9BXA9 1300 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 BAG4O95429 457 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 CORO7P57737 925 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 RASSF7Q02833 373 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 ICA1Q05084 483 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 GPR162Q16538 588 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 TXNRD3Q86VQ6 643 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 DRAXINQ8NBI3 349 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 ARPC5LQ9BPX5 153 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 RMI1Q9H9A7 625 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 IL1RAPL2Q9NP60 686 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
PDLIM5-207ENST00000503974 C6orf229H3BNL8 230 aa11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 CHMLP26374 656 aa11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 IARSP41252 1262 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 PLA2G4AP47712 749 aa11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 PDCD2Q16342 344 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 CDC37Q16543 378 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 WASHC4Q2M389 1173 aa11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 FBXO38Q6PIJ6 1188 aa11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 FBXO33Q7Z6M2 555 aa11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 NCAPG2Q86XI2 1143 aa11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 FAM84BQ96KN1 310 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 GPR101Q96P66 508 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 A1CFQ9NQ94 594 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 GNL3LQ9NVN8 582 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 DBNLQ9UJU6 430 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
PDLIM5-207ENST00000503974 APBB1O00213 710 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 SMARCA5O60264 1052 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 ADORA1P30542 326 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 TIMM10P62072 90 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 ANKRD45Q5TZF3 282 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 ZNF280DQ6N043 979 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 ARHGAP27Q6ZUM4 889 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 AACSQ86V21 672 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 CHD1LQ86WJ1 897 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 EFCAB13Q8IY85 973 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 RPUSD2Q8IZ73 545 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 XAGE2Q96GT9 111 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 ZNF277Q9NRM2 450 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 PSD3Q9NYI0 1048 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 FHOD1Q9Y613 1164 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 CHD4Q14839 1912 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 SCN9AQ15858 1988 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 SRCAPQ6ZRS2 3230 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 IVLP07476 585 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 LMNB1P20700 586 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 RASA3Q14644 834 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 AOC3Q16853 763 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 LEKR1Q6ZMV7 388 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 GET4Q7L5D6 327 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 GIMAP7Q8NHV1 300 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 DBNDD2Q9BQY9 259 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 LZTS2Q9BRK4 669 aa11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 ZC3H12CQ9C0D7 883 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-207ENST00000503974 COA1Q9GZY4 146 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms