RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 KRT1P04264 644 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 CLCN7P51798 805 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 PPP2R3AQ06190 1150 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 PDE3BQ13370 1112 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 PRR23BQ6ZRT6 265 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 DNAJC25Q9H1X3 360 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 PRDM10Q9NQV6 1147 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 TMEM39AQ9NV64 488 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 RAPGEFL1Q9UHV5 662 aa7.77□□□□□ -1.17
UBE3D-205ENST00000503942 H3BRB1 525 aa7.76□□□□□ -1.17
UBE3D-205ENST00000503942 NDUFB5O43674 189 aa7.76□□□□□ -1.17
UBE3D-205ENST00000503942 MPZL3Q6UWV2 235 aa7.76□□□□□ -1.17
UBE3D-205ENST00000503942 SULF2Q8IWU5 870 aa7.76□□□□□ -1.17
UBE3D-205ENST00000503942 KIRREL1Q96J84 757 aa7.76□□□□□ -1.17
UBE3D-205ENST00000503942 TUT1Q9H6E5 874 aaKnown RBP7.76□□□□□ -1.17
UBE3D-205ENST00000503942 GPN3Q9UHW5 284 aaPredicted RBP7.76□□□□□ -1.17
UBE3D-205ENST00000503942 EIF1AYO14602 144 aaKnown RBP7.75□□□□□ -1.17
UBE3D-205ENST00000503942 TTLL10Q6ZVT0 673 aa7.75□□□□□ -1.17
UBE3D-205ENST00000503942 CYFIP1Q7L576 1253 aa7.75□□□□□ -1.17
UBE3D-205ENST00000503942 STK35Q8TDR2 534 aa7.75□□□□□ -1.17
UBE3D-205ENST00000503942 B8ZZF3 427 aa7.74□□□□□ -1.17
UBE3D-205ENST00000503942 C1QTNF9P0C862 333 aa7.74□□□□□ -1.17
UBE3D-205ENST00000503942 NTF4P34130 210 aa7.74□□□□□ -1.17
UBE3D-205ENST00000503942 ARHGAP4P98171 946 aa7.74□□□□□ -1.17
UBE3D-205ENST00000503942 CCDC27Q2M243 656 aa7.74□□□□□ -1.17
UBE3D-205ENST00000503942 DTHD1Q6ZMT9 781 aa7.74□□□□□ -1.17
UBE3D-205ENST00000503942 GNAT3A8MTJ3 354 aa7.73□□□□□ -1.17
UBE3D-205ENST00000503942 NFIBO00712 420 aa7.73□□□□□ -1.17
UBE3D-205ENST00000503942 IGHA2P01877 340 aa7.73□□□□□ -1.17
UBE3D-205ENST00000503942 TMEM67Q5HYA8 995 aa7.73□□□□□ -1.17
UBE3D-205ENST00000503942 GLYCTKQ8IVS8 523 aa7.73□□□□□ -1.17
UBE3D-205ENST00000503942 RGS22Q8NE09 1264 aa7.73□□□□□ -1.17
UBE3D-205ENST00000503942 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
UBE3D-205ENST00000503942 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
UBE3D-205ENST00000503942 GPR182O15218 404 aa7.72□□□□□ -1.17
UBE3D-205ENST00000503942 ARNTP27540 789 aa7.72□□□□□ -1.17
UBE3D-205ENST00000503942 MAP1SQ66K74 1059 aaPredicted RBP7.72□□□□□ -1.17
UBE3D-205ENST00000503942 FBXO15Q8NCQ5 510 aaPredicted RBP7.72□□□□□ -1.17
UBE3D-205ENST00000503942 GPBAR1Q8TDU6 330 aa7.72□□□□□ -1.17
UBE3D-205ENST00000503942 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
UBE3D-205ENST00000503942 CARS2Q9HA77 564 aaKnown RBP7.72□□□□□ -1.17
UBE3D-205ENST00000503942 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
UBE3D-205ENST00000503942 BIN2Q9UBW5 565 aaPredicted RBP7.72□□□□□ -1.17
UBE3D-205ENST00000503942 EOMESO95936 686 aa7.71□□□□□ -1.18
UBE3D-205ENST00000503942 GDNFP39905 211 aa7.71□□□□□ -1.18
UBE3D-205ENST00000503942 FCGRTP55899 365 aa7.71□□□□□ -1.18
UBE3D-205ENST00000503942 ZNF252P-AS1Q0IIN9 211 aa7.71□□□□□ -1.18
UBE3D-205ENST00000503942 UBE3DQ7Z6J8 389 aa7.71□□□□□ -1.18
UBE3D-205ENST00000503942 AMIGO3Q86WK7 504 aa7.71□□□□□ -1.18
UBE3D-205ENST00000503942 EPS8L3Q8TE67 593 aaKnown RBP7.71□□□□□ -1.18
UBE3D-205ENST00000503942 PRDM5Q9NQX1 630 aaPredicted RBP7.71□□□□□ -1.18
UBE3D-205ENST00000503942 MAPK8IP1Q9UQF2 711 aa7.71□□□□□ -1.18
UBE3D-205ENST00000503942 XRCC5P13010 732 aaKnown RBP7.7□□□□□ -1.18
UBE3D-205ENST00000503942 PPM1JQ5JR12 505 aa7.7□□□□□ -1.18
UBE3D-205ENST00000503942 DNAJC14Q6Y2X3 702 aaPredicted RBP7.7□□□□□ -1.18
UBE3D-205ENST00000503942 FOXQ1Q9C009 403 aa7.7□□□□□ -1.18
UBE3D-205ENST00000503942 NME2P22392 152 aa7.69□□□□□ -1.18
UBE3D-205ENST00000503942 BUD31P41223 144 aaPredicted RBP7.69□□□□□ -1.18
UBE3D-205ENST00000503942 ACSBG1Q96GR2 724 aa7.69□□□□□ -1.18
UBE3D-205ENST00000503942 DIRC2Q96SL1 478 aa7.69□□□□□ -1.18
UBE3D-205ENST00000503942 EMILIN2Q9BXX0 1053 aa7.69□□□□□ -1.18
UBE3D-205ENST00000503942 NIF3L1Q9GZT8 377 aa7.69□□□□□ -1.18
UBE3D-205ENST00000503942 NSUN3Q9H649 340 aaKnown RBP7.69□□□□□ -1.18
UBE3D-205ENST00000503942 ATP13A1Q9HD20 1204 aa7.69□□□□□ -1.18
UBE3D-205ENST00000503942 CD320Q9NPF0 282 aa7.69□□□□□ -1.18
UBE3D-205ENST00000503942 SEMA3GQ9NS98 782 aa7.69□□□□□ -1.18
UBE3D-205ENST00000503942 NPIPB6E9PJ23 425 aa7.68□□□□□ -1.18
UBE3D-205ENST00000503942 RING1Q06587 406 aa7.68□□□□□ -1.18
UBE3D-205ENST00000503942 CSRNP1Q96S65 589 aa7.68□□□□□ -1.18
UBE3D-205ENST00000503942 FANCGO15287 622 aa7.67□□□□□ -1.18
UBE3D-205ENST00000503942 ZBTB37Q5TC79 503 aa7.67□□□□□ -1.18
UBE3D-205ENST00000503942 ARMCX6Q7L4S7 300 aa7.67□□□□□ -1.18
UBE3D-205ENST00000503942 NPAS4Q8IUM7 802 aa7.67□□□□□ -1.18
UBE3D-205ENST00000503942 HSPA12BQ96MM6 686 aa7.67□□□□□ -1.18
UBE3D-205ENST00000503942 CSADQ9Y600 493 aa7.67□□□□□ -1.18
UBE3D-205ENST00000503942 INHBBP09529 407 aa7.66□□□□□ -1.18
UBE3D-205ENST00000503942 MED14OSP0DP75 135 aa7.66□□□□□ -1.18
UBE3D-205ENST00000503942 KCNA10Q16322 511 aa7.66□□□□□ -1.18
UBE3D-205ENST00000503942 MPRIPQ6WCQ1 1025 aa7.66□□□□□ -1.18
UBE3D-205ENST00000503942 C22orf34Q6ZV56 151 aa7.66□□□□□ -1.18
UBE3D-205ENST00000503942 ALKBH8Q96BT7 664 aaKnown RBP7.66□□□□□ -1.18
UBE3D-205ENST00000503942 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
UBE3D-205ENST00000503942 PPP4R2Q9NY27 417 aa7.66□□□□□ -1.18
UBE3D-205ENST00000503942 TMEM253P0C7T8 217 aa7.65□□□□□ -1.18
UBE3D-205ENST00000503942 CCDC120Q96HB5 630 aa7.65□□□□□ -1.18
UBE3D-205ENST00000503942 EPB41L4BQ9H329 900 aa7.65□□□□□ -1.18
UBE3D-205ENST00000503942 CBX8Q9HC52 389 aa7.65□□□□□ -1.18
UBE3D-205ENST00000503942 DCTN4Q9UJW0 460 aa7.65□□□□□ -1.18
UBE3D-205ENST00000503942 DCDC2CA8MYV0 355 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 PRR33A8MZF0 331 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 FAM155AB1AL88 458 aaPredicted RBP7.64□□□□□ -1.19
UBE3D-205ENST00000503942 LRIG2O94898 1065 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 PI16Q6UXB8 463 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 CDC37L1Q7L3B6 337 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 MFSD4AQ8N468 514 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 TMC1Q8TDI8 760 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 DMRTB1Q96MA1 342 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 BCO2Q9BYV7 579 aa7.64□□□□□ -1.19
UBE3D-205ENST00000503942 DCP1AQ9NPI6 582 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms