RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 KIF7Q2M1P5 1343 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 CCDC85CA6NKD9 419 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 EML1O00423 815 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 HSP90AB1P08238 724 aaKnown RBP9.22□□□□□ -0.93
PTCD2-206ENST00000503315 IL13P35225 146 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 NOS2P35228 1153 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 ETFBP38117 255 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 ITPK1Q13572 414 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 AMOTQ4VCS5 1084 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 PLEKHO1Q53GL0 409 aaPredicted RBP9.22□□□□□ -0.93
PTCD2-206ENST00000503315 MSL1Q68DK7 614 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 PI16Q6UXB8 463 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 SMIM5Q71RC9 77 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 RPUSD2Q8IZ73 545 aaKnown RBP9.22□□□□□ -0.93
PTCD2-206ENST00000503315 ZNF784Q8NCA9 323 aaPredicted RBP9.22□□□□□ -0.93
PTCD2-206ENST00000503315 LINC00116Q8NCU8 138 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 EPS8L3Q8TE67 593 aaKnown RBP9.22□□□□□ -0.93
PTCD2-206ENST00000503315 SNX29Q8TEQ0 813 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 SH3TC2Q8TF17 1288 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 DCAF5Q96JK2 942 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 PPP4R2Q9NY27 417 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 TTF2Q9UNY4 1162 aaKnown RBP9.22□□□□□ -0.93
PTCD2-206ENST00000503315 KDRP35968 1356 aa9.21□□□□□ -0.94
PTCD2-206ENST00000503315 GADD45BO75293 160 aaPredicted RBP9.21□□□□□ -0.94
PTCD2-206ENST00000503315 ARID5BQ14865 1188 aa9.21□□□□□ -0.94
PTCD2-206ENST00000503315 HIF1AQ16665 826 aa9.21□□□□□ -0.94
PTCD2-206ENST00000503315 WNT2BQ93097 391 aa9.21□□□□□ -0.94
PTCD2-206ENST00000503315 RAB6BQ9NRW1 208 aa9.21□□□□□ -0.94
PTCD2-206ENST00000503315 FNDC3AQ9Y2H6 1198 aaKnown RBP9.21□□□□□ -0.94
PTCD2-206ENST00000503315 KDM6AO15550 1401 aaPredicted RBP9.2□□□□□ -0.94
PTCD2-206ENST00000503315 A6NHS1 94 aa9.2□□□□□ -0.94
PTCD2-206ENST00000503315 RASA3Q14644 834 aa9.2□□□□□ -0.94
PTCD2-206ENST00000503315 SULT6B1Q6IMI4 303 aa9.2□□□□□ -0.94
PTCD2-206ENST00000503315 CCDC146Q8IYE0 955 aa9.2□□□□□ -0.94
PTCD2-206ENST00000503315 HNRNPLLQ8WVV9 542 aaKnown RBP9.2□□□□□ -0.94
PTCD2-206ENST00000503315 JDP2Q8WYK2 163 aa9.2□□□□□ -0.94
PTCD2-206ENST00000503315 PHACTR1Q9C0D0 580 aa9.2□□□□□ -0.94
PTCD2-206ENST00000503315 ARHGEF10LQ9HCE6 1279 aa9.2□□□□□ -0.94
PTCD2-206ENST00000503315 FCF1Q9Y324 198 aaKnown RBP9.2□□□□□ -0.94
PTCD2-206ENST00000503315 CD2APQ9Y5K6 639 aa9.2□□□□□ -0.94
PTCD2-206ENST00000503315 KLF4O43474 513 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 EIF3JO75822 258 aaKnown RBP9.19□□□□□ -0.94
PTCD2-206ENST00000503315 PDGFRBP09619 1106 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 RLBP1P12271 317 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 YBX3P16989 372 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTCD2-206ENST00000503315 FSHRP23945 695 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 GSTT1P30711 240 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 IRS1P35568 1242 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 MTHFSP49914 203 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 TNNI3KQ59H18 835 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 ZNF530Q6P9A1 599 aaPredicted RBP9.19□□□□□ -0.94
PTCD2-206ENST00000503315 ADGRD1Q6QNK2 874 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 TRPM4Q8TD43 1214 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 ANAPC16Q96DE5 110 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 XAGE2Q96GT9 111 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 GINM1Q9NU53 330 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 PRKAG3Q9UGI9 489 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 KIF13BQ9NQT8 1826 aa9.19□□□□□ -0.94
PTCD2-206ENST00000503315 PHACTR2O75167 634 aa9.18□□□□□ -0.94
PTCD2-206ENST00000503315 TNFRSF21O75509 655 aa9.18□□□□□ -0.94
PTCD2-206ENST00000503315 GBP2P32456 591 aaPredicted RBP9.18□□□□□ -0.94
PTCD2-206ENST00000503315 EIF4A3P38919 411 aaKnown RBP9.18□□□□□ -0.94
PTCD2-206ENST00000503315 CABP4P57796 275 aa9.18□□□□□ -0.94
PTCD2-206ENST00000503315 AMPD3Q01432 767 aa9.18□□□□□ -0.94
PTCD2-206ENST00000503315 RC3H1Q5TC82 1133 aaKnown RBP9.18□□□□□ -0.94
PTCD2-206ENST00000503315 USPL1Q5W0Q7 1092 aa9.18□□□□□ -0.94
PTCD2-206ENST00000503315 NXPE4Q6UWF7 544 aa9.18□□□□□ -0.94
PTCD2-206ENST00000503315 FMNL3Q8IVF7 1028 aa9.18□□□□□ -0.94
PTCD2-206ENST00000503315 BCO2Q9BYV7 579 aa9.18□□□□□ -0.94
PTCD2-206ENST00000503315 C4AP0C0L4 1744 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 MINDY4BA8MYZ0 360 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 GRIN3BO60391 1043 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 GTF2E1P29083 439 aaPredicted RBP9.17□□□□□ -0.94
PTCD2-206ENST00000503315 SOX9P48436 509 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 LSM11P83369 360 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTCD2-206ENST00000503315 C1orf141Q5JVX7 400 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 ODR4Q5SWX8 454 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 ZNF438Q7Z4V0 828 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 TICAM2Q86XR7 235 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
PTCD2-206ENST00000503315 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 ADAMTS1Q9UHI8 967 aa9.17□□□□□ -0.94
PTCD2-206ENST00000503315 FOXD3Q9UJU5 478 aaPredicted RBP9.17□□□□□ -0.94
PTCD2-206ENST00000503315 N4BP2Q86UW6 1770 aaPredicted RBP9.16□□□□□ -0.94
PTCD2-206ENST00000503315 FAM221BA6H8Z2 402 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 GYS2P54840 703 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 CCDC85BQ15834 202 aaPredicted RBP9.16□□□□□ -0.94
PTCD2-206ENST00000503315 AKAP4Q5JQC9 854 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 CC2D1BQ5T0F9 858 aaKnown RBP9.16□□□□□ -0.94
PTCD2-206ENST00000503315 TRAPPC3LQ5T215 181 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 SH3PXD2AQ5TCZ1 1133 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 FERMT3Q86UX7 667 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 SMC5Q8IY18 1101 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 CNKSR1Q969H4 720 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 CCDC113Q9H0I3 377 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 ZFYVE28Q9HCC9 887 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 NPHS2Q9NP85 383 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 GABBR1Q9UBS5 961 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 RTCBQ9Y3I0 505 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms