RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 PSMC4P43686 418 aa13.2□□□□□ -0.3
SNCA-207ENST00000502987 PI16Q6UXB8 463 aa13.2□□□□□ -0.3
SNCA-207ENST00000502987 FTSJ3Q8IY81 847 aaKnown RBP13.2□□□□□ -0.3
SNCA-207ENST00000502987 SCYL3Q8IZE3 742 aa13.2□□□□□ -0.3
SNCA-207ENST00000502987 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
SNCA-207ENST00000502987 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
SNCA-207ENST00000502987 KCNH4Q9UQ05 1017 aa13.2□□□□□ -0.3
SNCA-207ENST00000502987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.2□□□□□ -0.3
SNCA-207ENST00000502987 CXCL11O14625 94 aa13.19□□□□□ -0.3
SNCA-207ENST00000502987 GNRH1P01148 92 aa13.19□□□□□ -0.3
SNCA-207ENST00000502987 UQCRFS1P1P0C7P4 283 aa13.19□□□□□ -0.3
SNCA-207ENST00000502987 TTC39AQ5SRH9 613 aa13.19□□□□□ -0.3
SNCA-207ENST00000502987 C17orf99Q6UX52 265 aa13.19□□□□□ -0.3
SNCA-207ENST00000502987 SH3BP5LQ7L8J4 393 aa13.19□□□□□ -0.3
SNCA-207ENST00000502987 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
SNCA-207ENST00000502987 ZNF333Q96JL9 665 aa13.19□□□□□ -0.3
SNCA-207ENST00000502987 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
SNCA-207ENST00000502987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNCA-207ENST00000502987 DDX4Q9NQI0 724 aaKnown RBP13.19□□□□□ -0.3
SNCA-207ENST00000502987 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
SNCA-207ENST00000502987 RBBP6Q7Z6E9 1792 aaKnown RBP13.18□□□□□ -0.3
SNCA-207ENST00000502987 GPR75-ASB3A0A0A6YYF3 556 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 PHF20L1A8MW92 1017 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 CTNND1O60716 968 aaKnown RBP13.18□□□□□ -0.3
SNCA-207ENST00000502987 SURF6O75683 361 aaKnown RBP13.18□□□□□ -0.3
SNCA-207ENST00000502987 SLURP2P0DP57 97 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 PTPRAP18433 802 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 PRMT2P55345 433 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 RAET1EQ8TD07 263 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 SNRKQ9NRH2 765 aa13.18□□□□□ -0.3
SNCA-207ENST00000502987 MKI67P46013 3256 aaKnown RBP13.18□□□□□ -0.3
SNCA-207ENST00000502987 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
SNCA-207ENST00000502987 CYP2C8P10632 490 aa13.17□□□□□ -0.3
SNCA-207ENST00000502987 ARID4AP29374 1257 aaPredicted RBP13.17□□□□□ -0.3
SNCA-207ENST00000502987 ITPRIPQ8IWB1 547 aa13.17□□□□□ -0.3
SNCA-207ENST00000502987 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
SNCA-207ENST00000502987 NSUN4Q96CB9 384 aaKnown RBP13.17□□□□□ -0.3
SNCA-207ENST00000502987 TRIM47Q96LD4 638 aa13.17□□□□□ -0.3
SNCA-207ENST00000502987 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
SNCA-207ENST00000502987 DOCK1Q14185 1865 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 A0A0G2JLL6 359 aaPredicted RBP13.16□□□□□ -0.3
SNCA-207ENST00000502987 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 BAG3O95817 575 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
SNCA-207ENST00000502987 OSBPP22059 807 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 MCAMP43121 646 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 RHBDL3P58872 404 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 ATP8B2P98198 1209 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 MOGSQ13724 837 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 NAA16Q6N069 864 aaPredicted RBP13.16□□□□□ -0.3
SNCA-207ENST00000502987 GPAT2Q6NUI2 795 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 PRRT2Q7Z6L0 340 aaPredicted RBP13.16□□□□□ -0.3
SNCA-207ENST00000502987 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
SNCA-207ENST00000502987 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 AFG3L2Q9Y4W6 797 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 MGAMO43451 1857 aa13.16□□□□□ -0.3
SNCA-207ENST00000502987 MYPNQ86TC9 1320 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 GRK4P32298 578 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 FCGRTP55899 365 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 MAP3K10Q02779 954 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
SNCA-207ENST00000502987 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
SNCA-207ENST00000502987 ZNF384Q8TF68 577 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 GCC1Q96CN9 775 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 DBNDD2Q9BQY9 259 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.15□□□□□ -0.3
SNCA-207ENST00000502987 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
SNCA-207ENST00000502987 BRCA2P51587 3418 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 ST18O60284 1047 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 TBC1D12O60347 775 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 CTGFP29279 349 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 GSE1Q14687 1217 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
SNCA-207ENST00000502987 TRIM34Q9BYJ4 488 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 OSBPL5Q9H0X9 879 aaPredicted RBP13.14□□□□□ -0.31
SNCA-207ENST00000502987 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 AATFQ9NY61 560 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNCA-207ENST00000502987 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 ATRNL1Q5VV63 1379 aa13.14□□□□□ -0.31
SNCA-207ENST00000502987 ATAD5Q96QE3 1844 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 PTPRFP10586 1907 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 MYO5AQ9Y4I1 1855 aaKnown RBP13.13□□□□□ -0.31
SNCA-207ENST00000502987 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 BCRP11274 1271 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 UBXN2AP68543 259 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 SPP2Q13103 211 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 MTFR1Q15390 333 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 CRACR2BQ8N4Y2 399 aaPredicted RBP13.13□□□□□ -0.31
SNCA-207ENST00000502987 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 TGFBRAP1Q8WUH2 860 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 CCDC8Q9H0W5 538 aaPredicted RBP13.13□□□□□ -0.31
SNCA-207ENST00000502987 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 ADGRA2Q96PE1 1338 aa13.13□□□□□ -0.31
SNCA-207ENST00000502987 TNPO2O14787 897 aaKnown RBP13.12□□□□□ -0.31
SNCA-207ENST00000502987 PRKCZQ05513 592 aa13.12□□□□□ -0.31
SNCA-207ENST00000502987 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
SNCA-207ENST00000502987 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms