RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ZKSCAN3Q9BRR0 538 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 TCHHQ07283 1943 aa25.71■■□□□ 1.71
PTPN13-205ENST00000502971 SEC23AQ15436 765 aa25.7■■□□□ 1.7
PTPN13-205ENST00000502971 C12orf60Q5U649 245 aa25.7■■□□□ 1.7
PTPN13-205ENST00000502971 PODNQ7Z5L7 613 aa25.7■■□□□ 1.7
PTPN13-205ENST00000502971 IQCA1Q86XH1 822 aa25.7■■□□□ 1.7
PTPN13-205ENST00000502971 ZSCAN10Q96SZ4 725 aaPredicted RBP25.7■■□□□ 1.7
PTPN13-205ENST00000502971 ISY1Q9ULR0 285 aaKnown RBP25.7■■□□□ 1.7
PTPN13-205ENST00000502971 SLX4Q8IY92 1834 aa25.7■■□□□ 1.7
PTPN13-205ENST00000502971 FIBPO43427 364 aa25.69■■□□□ 1.7
PTPN13-205ENST00000502971 RANBP6O60518 1105 aaKnown RBP25.69■■□□□ 1.7
PTPN13-205ENST00000502971 ADD1P35611 737 aaKnown RBP25.69■■□□□ 1.7
PTPN13-205ENST00000502971 DOK7Q18PE1 504 aa25.69■■□□□ 1.7
PTPN13-205ENST00000502971 TNKSO95271 1327 aa25.69■■□□□ 1.7
PTPN13-205ENST00000502971 USP17L8P0C7I0 530 aa25.68■■□□□ 1.7
PTPN13-205ENST00000502971 CYP2D6P10635 497 aa25.68■■□□□ 1.7
PTPN13-205ENST00000502971 CDC27P30260 824 aa25.68■■□□□ 1.7
PTPN13-205ENST00000502971 CAVIN1Q6NZI2 390 aaKnown RBP25.68■■□□□ 1.7
PTPN13-205ENST00000502971 TGFBRAP1Q8WUH2 860 aa25.68■■□□□ 1.7
PTPN13-205ENST00000502971 C7orf43Q8WVR3 580 aa25.68■■□□□ 1.7
PTPN13-205ENST00000502971 ROBO3Q96MS0 1386 aa25.68■■□□□ 1.7
PTPN13-205ENST00000502971 UBE2HP62256 183 aa25.68■■□□□ 1.7
PTPN13-205ENST00000502971 FAM217BQ9NTX9 383 aaPredicted RBP25.68■■□□□ 1.7
PTPN13-205ENST00000502971 PRDM1O75626 825 aa25.67■■□□□ 1.7
PTPN13-205ENST00000502971 RXRAP19793 462 aa25.67■■□□□ 1.7
PTPN13-205ENST00000502971 PPP2R5BQ15173 497 aa25.67■■□□□ 1.7
PTPN13-205ENST00000502971 TEX11Q8IYF3 940 aa25.67■■□□□ 1.7
PTPN13-205ENST00000502971 TTLL6Q8N841 843 aa25.67■■□□□ 1.7
PTPN13-205ENST00000502971 FBXW7Q969H0 707 aa25.67■■□□□ 1.7
PTPN13-205ENST00000502971 C8orf76Q96K31 380 aa25.67■■□□□ 1.7
PTPN13-205ENST00000502971 SCAND2PQ9GZW5 306 aaPredicted RBP25.67■■□□□ 1.7
PTPN13-205ENST00000502971 NAV1Q8NEY1 1877 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 CCDC196A0A1B0GTZ2 297 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 FSD2A1L4K1 749 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 GADD45BO75293 160 aaPredicted RBP25.66■■□□□ 1.7
PTPN13-205ENST00000502971 NTRK3Q16288 839 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 ZNF654Q8IZM8 581 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 ENAHQ8N8S7 591 aaPredicted RBP25.66■■□□□ 1.7
PTPN13-205ENST00000502971 MYL10Q9BUA6 226 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 ELP1O95163 1332 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 GOLGA6L3A6NEY3 463 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 DPEP1P16444 411 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 KCNA3P22001 575 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 RHBDL3P58872 404 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 GRIPAP1Q4V328 841 aa25.66■■□□□ 1.7
PTPN13-205ENST00000502971 STK36Q9NRP7 1315 aa25.65■■□□□ 1.7
PTPN13-205ENST00000502971 PPFIA3O75145 1194 aa25.65■■□□□ 1.7
PTPN13-205ENST00000502971 IARSP41252 1262 aaKnown RBP25.65■■□□□ 1.7
PTPN13-205ENST00000502971 FKBP1AP62942 108 aaKnown RBP25.65■■□□□ 1.7
PTPN13-205ENST00000502971 RTN1Q16799 776 aa25.65■■□□□ 1.7
PTPN13-205ENST00000502971 L1TD1Q5T7N2 865 aaKnown RBP25.65■■□□□ 1.7
PTPN13-205ENST00000502971 CCDC144CPQ8IYA2 1237 aa25.65■■□□□ 1.7
PTPN13-205ENST00000502971 CERS5Q8N5B7 392 aa25.65■■□□□ 1.7
PTPN13-205ENST00000502971 SUPT20HQ8NEM7 779 aa25.65■■□□□ 1.7
PTPN13-205ENST00000502971 DAGLAQ9Y4D2 1042 aa25.65■■□□□ 1.7
PTPN13-205ENST00000502971 IFNAR1P17181 557 aa25.64■■□□□ 1.7
PTPN13-205ENST00000502971 FOSBP53539 338 aa25.64■■□□□ 1.7
PTPN13-205ENST00000502971 EVX2Q03828 476 aa25.64■■□□□ 1.7
PTPN13-205ENST00000502971 IFIT1BQ5T764 474 aaKnown RBP25.64■■□□□ 1.7
PTPN13-205ENST00000502971 ATL3Q6DD88 541 aa25.64■■□□□ 1.7
PTPN13-205ENST00000502971 FAM173BQ6P4H8 233 aa25.64■■□□□ 1.7
PTPN13-205ENST00000502971 MAPKAPK5Q8IW41 473 aa25.64■■□□□ 1.7
PTPN13-205ENST00000502971 FBXO18Q8NFZ0 1043 aa25.64■■□□□ 1.7
PTPN13-205ENST00000502971 SYAP1Q96A49 352 aaPredicted RBP25.64■■□□□ 1.7
PTPN13-205ENST00000502971 PIM2Q9P1W9 311 aa25.64■■□□□ 1.7
PTPN13-205ENST00000502971 POLR3DP05423 398 aaPredicted RBP25.63■■□□□ 1.69
PTPN13-205ENST00000502971 SNED1Q8TER0 1413 aa25.63■■□□□ 1.69
PTPN13-205ENST00000502971 CFAP45Q9UL16 551 aa25.63■■□□□ 1.69
PTPN13-205ENST00000502971 TTF2Q9UNY4 1162 aaKnown RBP25.63■■□□□ 1.69
PTPN13-205ENST00000502971 ZNF445P59923 1031 aa25.63■■□□□ 1.69
PTPN13-205ENST00000502971 SSRP1Q08945 709 aaKnown RBP25.63■■□□□ 1.69
PTPN13-205ENST00000502971 ZSCAN23Q3MJ62 389 aa25.63■■□□□ 1.69
PTPN13-205ENST00000502971 FANCBQ8NB91 859 aa25.63■■□□□ 1.69
PTPN13-205ENST00000502971 ZNF287Q9HBT7 754 aa25.63■■□□□ 1.69
PTPN13-205ENST00000502971 ZNF219Q9P2Y4 722 aaPredicted RBP25.63■■□□□ 1.69
PTPN13-205ENST00000502971 FLT1P17948 1338 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 FMNL1O95466 1100 aaPredicted RBP25.62■■□□□ 1.69
PTPN13-205ENST00000502971 CALM1P0DP23 149 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 CALM2P0DP24 149 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 CALM3P0DP25 149 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 STRIP1Q5VSL9 837 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 CATIPQ7Z7H3 387 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 WASF1Q92558 559 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 DBNDD1Q9H9R9 158 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 PPP1R1BQ9UD71 204 aaPredicted RBP25.62■■□□□ 1.69
PTPN13-205ENST00000502971 CDK5RAP2Q96SN8 1893 aa25.62■■□□□ 1.69
PTPN13-205ENST00000502971 TSPY2A6NKD2 308 aa25.61■■□□□ 1.69
PTPN13-205ENST00000502971 GUCY1B3Q02153 619 aa25.61■■□□□ 1.69
PTPN13-205ENST00000502971 HHIPL2Q6UWX4 724 aa25.61■■□□□ 1.69
PTPN13-205ENST00000502971 TTC6Q86TZ1 520 aa25.61■■□□□ 1.69
PTPN13-205ENST00000502971 ALG1Q9BT22 464 aa25.61■■□□□ 1.69
PTPN13-205ENST00000502971 TMEM63CQ9P1W3 806 aa25.61■■□□□ 1.69
PTPN13-205ENST00000502971 RBM27Q9P2N5 1060 aaKnown RBP25.61■■□□□ 1.69
PTPN13-205ENST00000502971 CCDC178Q5BJE1 867 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 PHKBQ93100 1093 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 SPATA32Q96LK8 384 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 ZNF396Q96N95 335 aaPredicted RBP25.6■■□□□ 1.69
PTPN13-205ENST00000502971 MRIQ9BWK5 157 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 MKNK2Q9HBH9 465 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 DDX60LQ5H9U9 1706 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms