RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 MTMR7Q9Y216 660 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 SPEF2Q9C093 1822 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 MCM4P33991 863 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 BMP8BP34820 402 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 UBXN2AP68543 259 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 LACTBP83111 547 aaPredicted RBP5.5□□□□□ -1.53
MATR3-202ENST00000502422 DMTNQ08495 405 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 NEXNQ0ZGT2 675 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 MTFR1Q15390 333 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 DMRTA1Q5VZB9 504 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 ZNF687Q8N1G0 1237 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 BRI3BPQ8WY22 251 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 MAP7D2Q96T17 732 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 RNF208Q9H0X6 261 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 GZF1Q9H116 711 aaPredicted RBP5.5□□□□□ -1.53
MATR3-202ENST00000502422 SLKQ9H2G2 1235 aaPredicted RBP5.5□□□□□ -1.53
MATR3-202ENST00000502422 PRO3102Q9H379 93 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 MYH16Q9H6N6 1097 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 ECM29Q5VYK3 1845 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 LAMA3Q16787 3333 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 LAMB1P07942 1786 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 ELL2O00472 640 aaPredicted RBP5.5□□□□□ -1.53
MATR3-202ENST00000502422 FMNL1O95466 1100 aaPredicted RBP5.5□□□□□ -1.53
MATR3-202ENST00000502422 GRK4P32298 578 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 GJA8P48165 433 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 TNNI2P48788 182 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 PACS2Q86VP3 889 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 HELBQ8NG08 1087 aaPredicted RBP5.5□□□□□ -1.53
MATR3-202ENST00000502422 TRIM47Q96LD4 638 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 METTL22Q9BUU2 404 aaPredicted RBP5.5□□□□□ -1.53
MATR3-202ENST00000502422 ARHGAP39Q9C0H5 1083 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 CHMP4BQ9H444 224 aaKnown RBP5.5□□□□□ -1.53
MATR3-202ENST00000502422 GOPCQ9HD26 462 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 KIAA1468Q9P260 1216 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 PCDHAC2Q9Y5I4 1007 aa5.5□□□□□ -1.53
MATR3-202ENST00000502422 GJB1P08034 283 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 CETPP11597 493 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 ZSCAN20P17040 1043 aaPredicted RBP5.49□□□□□ -1.53
MATR3-202ENST00000502422 KLRK1P26718 216 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 PSMC4P43686 418 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 ZNF804AQ7Z570 1209 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 CCDC146Q8IYE0 955 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 LRCH3Q96II8 777 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 COL25A1Q9BXS0 654 aaPredicted RBP5.49□□□□□ -1.53
MATR3-202ENST00000502422 TMEM51Q9NW97 253 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 MAP3K2Q9Y2U5 619 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 RIPOR2Q9Y4F9 1068 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 MYH3P11055 1940 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 SSC5DA1L4H1 1573 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 UNC80Q8N2C7 3258 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 ZNF646O15015 1829 aaPredicted RBP5.49□□□□□ -1.53
MATR3-202ENST00000502422 ARHGAP33O14559 1287 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 TRAK2O60296 914 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 CCL5P13501 91 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 ITGA6P23229 1130 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 CHRNDQ07001 517 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 VGLL4Q14135 290 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 SH3D19Q5HYK7 790 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.49□□□□□ -1.53
MATR3-202ENST00000502422 GAS2L3Q86XJ1 694 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 CERS5Q8N5B7 392 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 IPO4Q8TEX9 1081 aaKnown RBP5.49□□□□□ -1.53
MATR3-202ENST00000502422 SHISA4Q96DD7 197 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 TDRD3Q9H7E2 651 aaKnown RBP5.49□□□□□ -1.53
MATR3-202ENST00000502422 STAP2Q9UGK3 403 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 SRRDQ9UH36 339 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 JAG2Q9Y219 1238 aa5.49□□□□□ -1.53
MATR3-202ENST00000502422 TCP10L2B9ZVM9 353 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 ZBTB7BO15156 539 aaPredicted RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 TAF5LO75529 589 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 FARP2O94887 1054 aaPredicted RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 SNAPC2Q13487 334 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 CCDC30Q5VVM6 783 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 ERO1BQ86YB8 467 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 DEFB123Q8N688 67 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 SNX27Q96L92 541 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 ZCCHC17Q9NP64 241 aaKnown RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 ZNF70Q9UC06 446 aaPredicted RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 MYPNQ86TC9 1320 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 PI4KAP2A4QPH2 592 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 BTBD19C9JJ37 291 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 SOX1O00570 391 aaPredicted RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 TFRCP02786 760 aaKnown RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 DNAJB2P25686 324 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 FKBP1AP62942 108 aaKnown RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 UBE3BQ7Z3V4 1068 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 PI4KAP1Q8N8J0 262 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 PROCA1Q8NCQ7 364 aaPredicted RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.48□□□□□ -1.53
MATR3-202ENST00000502422 U2AF1L4Q8WU68 220 aaKnown RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 TBC1D2Q9BYX2 928 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 TMEM134Q9H6X4 195 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 MBIPQ9NS73 344 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 FAM13BQ9NYF5 915 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 BCCIPQ9P287 314 aaKnown RBP eCLIP5.48□□□□□ -1.53
MATR3-202ENST00000502422 CPA4Q9UI42 421 aa5.48□□□□□ -1.53
MATR3-202ENST00000502422 ISY1Q9ULR0 285 aaKnown RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 TTF2Q9UNY4 1162 aaKnown RBP5.48□□□□□ -1.53
MATR3-202ENST00000502422 ANKRD18BA2A2Z9 1011 aa5.47□□□□□ -1.53
MATR3-202ENST00000502422 SPDYE5A6NIY4 337 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms