RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 BNC2Q6ZN30 1099 aaPredicted RBP4.33□□□□□ -1.72
SMAD1-203ENST00000502342 CYFIP1Q7L576 1253 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 ZNF507Q8TCN5 953 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 XAGE3Q8WTP9 111 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 GAL3ST3Q96A11 431 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 METTL22Q9BUU2 404 aaPredicted RBP4.33□□□□□ -1.72
SMAD1-203ENST00000502342 DUSP23Q9BVJ7 150 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 MIR1-1HGQ9H1L0 117 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 FBRSQ9HAH7 460 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 COPRSQ9NQ92 184 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 ZC3H7BQ9UGR2 993 aaKnown RBP4.33□□□□□ -1.72
SMAD1-203ENST00000502342 GFRA2O00451 464 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 WNT11O96014 354 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 ZNF16P17020 682 aaPredicted RBP4.32□□□□□ -1.72
SMAD1-203ENST00000502342 GRK4P32298 578 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 NTF4P34130 210 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 ST13P50502 369 aaKnown RBP4.32□□□□□ -1.72
SMAD1-203ENST00000502342 BNIP3Q12983 259 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 CAMK2GQ13555 558 aaPredicted RBP4.32□□□□□ -1.72
SMAD1-203ENST00000502342 NKG7Q16617 165 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 ARHGAP27Q6ZUM4 889 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 DTX1Q86Y01 620 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 TMEM87AQ8NBN3 555 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 PHC3Q8NDX5 983 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 RIN3Q8TB24 985 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 CRELD1Q96HD1 420 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 PSMG3-AS1Q96PY0 264 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 NOC4LQ9BVI4 516 aaKnown RBP4.32□□□□□ -1.72
SMAD1-203ENST00000502342 WNT10AQ9GZT5 417 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 SNCAIPQ9Y6H5 919 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 U3KQE9 123 aa4.32□□□□□ -1.72
SMAD1-203ENST00000502342 CNTNAP4Q9C0A0 1308 aa4.31□□□□□ -1.72
SMAD1-203ENST00000502342 SPINK2P20155 84 aa4.31□□□□□ -1.72
SMAD1-203ENST00000502342 TSNAXIP1Q2TAA8 658 aa4.31□□□□□ -1.72
SMAD1-203ENST00000502342 HEXIM2Q96MH2 286 aaKnown RBP4.31□□□□□ -1.72
SMAD1-203ENST00000502342 TMEM74Q96NL1 305 aa4.31□□□□□ -1.72
SMAD1-203ENST00000502342 RSRP1Q9BUV0 290 aa4.31□□□□□ -1.72
SMAD1-203ENST00000502342 PRDM10Q9NQV6 1147 aa4.31□□□□□ -1.72
SMAD1-203ENST00000502342 KBTBD4Q9NVX7 518 aa4.31□□□□□ -1.72
SMAD1-203ENST00000502342 CORINQ9Y5Q5 1042 aa4.31□□□□□ -1.72
SMAD1-203ENST00000502342 KIAA1324LA8MWY0 1029 aaPredicted RBP4.3□□□□□ -1.72
SMAD1-203ENST00000502342 UPK3BL1B0FP48 263 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 UPK3BL2E5RIL1 263 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 TLR3O15455 904 aaKnown RBP4.3□□□□□ -1.72
SMAD1-203ENST00000502342 F13A1P00488 732 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 PGRP06401 933 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 ITIH2P19823 946 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 GP2P55259 537 aaKnown RBP4.3□□□□□ -1.72
SMAD1-203ENST00000502342 SLBPQ14493 270 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMAD1-203ENST00000502342 CPSF6Q16630 551 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMAD1-203ENST00000502342 ARMCX6Q7L4S7 300 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 HID1Q8IV36 788 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 PLD6Q8N2A8 252 aaKnown RBP4.3□□□□□ -1.72
SMAD1-203ENST00000502342 GOLM1Q8NBJ4 401 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 KCT2Q8NC54 265 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 FBXO27Q8NI29 283 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 DPH2Q9BQC3 489 aaPredicted RBP4.3□□□□□ -1.72
SMAD1-203ENST00000502342 BACH2Q9BYV9 841 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 FOXQ1Q9C009 403 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 CCDC39Q9UFE4 941 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 GGT7Q9UJ14 662 aa4.3□□□□□ -1.72
SMAD1-203ENST00000502342 OAS3Q9Y6K5 1087 aaKnown RBP4.3□□□□□ -1.72
SMAD1-203ENST00000502342 GRIN3BO60391 1043 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 SLITRK5O94991 958 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 BPNT1O95861 308 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 EOMESO95936 686 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 PLCG1P19174 1290 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 CD96P40200 585 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 RPL6Q02878 288 aaKnown RBP4.29□□□□□ -1.72
SMAD1-203ENST00000502342 LMNB2Q03252 620 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 PWP1Q13610 501 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 MRPL58Q14197 206 aaKnown RBP4.29□□□□□ -1.72
SMAD1-203ENST00000502342 MSMPQ1L6U9 139 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 SNAP47Q5SQN1 464 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 LDLRAD1Q5T700 205 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 FAM214BQ7L5A3 538 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 CDH24Q86UP0 819 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 TP53INP2Q8IXH6 220 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 MIPEPQ99797 713 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 TJP2Q9UDY2 1190 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 TPX2Q9ULW0 747 aaKnown RBP4.29□□□□□ -1.72
SMAD1-203ENST00000502342 ANGEL1Q9UNK9 670 aaKnown RBP4.29□□□□□ -1.72
SMAD1-203ENST00000502342 PLAGL2Q9UPG8 496 aa4.29□□□□□ -1.72
SMAD1-203ENST00000502342 FAM221AA4D161 298 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 LRIG2O94898 1065 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 CBX7O95931 251 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 OXCT1P55809 520 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 PRAMEF13Q5VWM6 474 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 FBXL19Q6PCT2 694 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 ZNF574Q6ZN55 896 aaPredicted RBP4.28□□□□□ -1.72
SMAD1-203ENST00000502342 SPRED2Q7Z698 418 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 NETO1Q8TDF5 533 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 GATAD2BQ8WXI9 593 aa4.28□□□□□ -1.72
SMAD1-203ENST00000502342 BSDC1Q9NW68 430 aaPredicted RBP4.28□□□□□ -1.72
SMAD1-203ENST00000502342 PRR33A8MZF0 331 aa4.27□□□□□ -1.73
SMAD1-203ENST00000502342 CHURC1-FNTBB4DL54 471 aa4.27□□□□□ -1.73
SMAD1-203ENST00000502342 CILPO75339 1184 aa4.27□□□□□ -1.73
SMAD1-203ENST00000502342 GARTP22102 1010 aa4.27□□□□□ -1.73
SMAD1-203ENST00000502342 EIF4A3P38919 411 aaKnown RBP4.27□□□□□ -1.73
SMAD1-203ENST00000502342 PDE4BQ07343 736 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms