RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 XRCC6P12956 609 aaKnown RBP eCLIP21.3■■□□□ 1
LINC00535-201ENST00000501400 CHRNA5P30532 468 aa21.3■■□□□ 1
LINC00535-201ENST00000501400 BTDP43251 543 aa21.3■■□□□ 1
LINC00535-201ENST00000501400 OTUD7BQ6GQQ9 843 aa21.3■■□□□ 1
LINC00535-201ENST00000501400 PHKBQ93100 1093 aa21.3■■□□□ 1
LINC00535-201ENST00000501400 TFIP11Q9UBB9 837 aaKnown RBP21.3■■□□□ 1
LINC00535-201ENST00000501400 CDKL5O76039 1030 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 USP5P45974 858 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 ZNF654Q8IZM8 581 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 FBXO18Q8NFZ0 1043 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 LEO1Q8WVC0 666 aaPredicted RBP21.29■■□□□ 1
LINC00535-201ENST00000501400 C8orf76Q96K31 380 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 ZSCAN10Q96SZ4 725 aaPredicted RBP21.29■■□□□ 1
LINC00535-201ENST00000501400 ZC3H12CQ9C0D7 883 aaKnown RBP21.29■■□□□ 1
LINC00535-201ENST00000501400 H0YIN7 160 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 RCAN1P53805 252 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 SLC4A8Q2Y0W8 1093 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 C12orf60Q5U649 245 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 TMTC2Q8N394 836 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 CERS5Q8N5B7 392 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 FAM163AQ96GL9 167 aaPredicted RBP21.29■■□□□ 1
LINC00535-201ENST00000501400 AIFM3Q96NN9 605 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 SCAND2PQ9GZW5 306 aaPredicted RBP21.29■■□□□ 1
LINC00535-201ENST00000501400 GRPEL1Q9HAV7 217 aa21.29■■□□□ 1
LINC00535-201ENST00000501400 RHBDL3P58872 404 aa21.28■■□□□ 1
LINC00535-201ENST00000501400 SCN9AQ15858 1988 aa21.28■■□□□ 1
LINC00535-201ENST00000501400 C10orf71Q711Q0 1435 aa21.28■■□□□ 1
LINC00535-201ENST00000501400 TGFBRAP1Q8WUH2 860 aa21.28■■□□□ 1
LINC00535-201ENST00000501400 STK36Q9NRP7 1315 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 MRE11P49959 708 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 DOK7Q18PE1 504 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 CPLX2Q6PUV4 134 aaKnown RBP21.27■■□□□ 1
LINC00535-201ENST00000501400 NOL10Q9BSC4 688 aaKnown RBP21.27■■□□□ 1
LINC00535-201ENST00000501400 MYH1P12882 1939 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 SYCE3A1L190 88 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 UBE2Q2LH0YL09 131 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 BAG6P46379 1132 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 RTN1Q16799 776 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 SYNE3Q6ZMZ3 975 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 CERS3Q8IU89 383 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 SPATA32Q96LK8 384 aa21.27■■□□□ 1
LINC00535-201ENST00000501400 FTOQ9C0B1 505 aaKnown RBP eCLIP21.27■■□□□ 1
LINC00535-201ENST00000501400 GOLGB1Q14789 3259 aaKnown RBP21.26■□□□□ 0.99
LINC00535-201ENST00000501400 IFNAR1P17181 557 aa21.26■□□□□ 0.99
LINC00535-201ENST00000501400 TPRNQ4KMQ1 711 aa21.26■□□□□ 0.99
LINC00535-201ENST00000501400 MAPKAPK5Q8IW41 473 aa21.26■□□□□ 0.99
LINC00535-201ENST00000501400 RGS22Q8NE09 1264 aa21.26■□□□□ 0.99
LINC00535-201ENST00000501400 ALG1Q9BT22 464 aa21.26■□□□□ 0.99
LINC00535-201ENST00000501400 DAGLAQ9Y4D2 1042 aa21.26■□□□□ 0.99
LINC00535-201ENST00000501400 MYH6P13533 1939 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 SLC3A2P08195 630 aaKnown RBP21.25■□□□□ 0.99
LINC00535-201ENST00000501400 IARSP41252 1262 aaKnown RBP21.25■□□□□ 0.99
LINC00535-201ENST00000501400 FAM47AQ5JRC9 791 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 IQCA1Q86XH1 822 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 SYAP1Q96A49 352 aaPredicted RBP21.25■□□□□ 0.99
LINC00535-201ENST00000501400 PANK2Q9BZ23 570 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 KIF28PB7ZC32 967 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 NMT2O60551 498 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 FMNL1O95466 1100 aaPredicted RBP21.25■□□□□ 0.99
LINC00535-201ENST00000501400 PDE4BQ07343 736 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 NBPF11Q86T75 865 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 C7orf43Q8WVR3 580 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 DYNLL2Q96FJ2 89 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 MXD3Q9BW11 206 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 SUGT1Q9Y2Z0 365 aa21.25■□□□□ 0.99
LINC00535-201ENST00000501400 FLT1P17948 1338 aa21.24■□□□□ 0.99
LINC00535-201ENST00000501400 IFIT1BQ5T764 474 aaKnown RBP21.24■□□□□ 0.99
LINC00535-201ENST00000501400 LRSAM1Q6UWE0 723 aa21.24■□□□□ 0.99
LINC00535-201ENST00000501400 SLF2Q8IX21 1173 aa21.24■□□□□ 0.99
LINC00535-201ENST00000501400 TEX11Q8IYF3 940 aa21.24■□□□□ 0.99
LINC00535-201ENST00000501400 FANCBQ8NB91 859 aa21.24■□□□□ 0.99
LINC00535-201ENST00000501400 PGBD1Q96JS3 809 aa21.24■□□□□ 0.99
LINC00535-201ENST00000501400 USP28Q96RU2 1077 aa21.24■□□□□ 0.99
LINC00535-201ENST00000501400 EYA3Q99504 573 aa21.24■□□□□ 0.99
LINC00535-201ENST00000501400 TMX4Q9H1E5 349 aaPredicted RBP21.24■□□□□ 0.99
LINC00535-201ENST00000501400 PLCD1P51178 756 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 KIF23Q02241 960 aaPredicted RBP21.23■□□□□ 0.99
LINC00535-201ENST00000501400 NUP133Q8WUM0 1156 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 FBXW7Q969H0 707 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 SLC26A6Q9BXS9 759 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 PLCG2P16885 1265 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 SF3B2Q13435 895 aaKnown RBP21.23■□□□□ 0.99
LINC00535-201ENST00000501400 CCDC183Q5T5S1 534 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 CNKSR1Q969H4 720 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 DBNDD1Q9H9R9 158 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 SAP30BPQ9UHR5 308 aaKnown RBP21.23■□□□□ 0.99
LINC00535-201ENST00000501400 CFAP45Q9UL16 551 aa21.23■□□□□ 0.99
LINC00535-201ENST00000501400 GUCY1A2P33402 732 aa21.22■□□□□ 0.99
LINC00535-201ENST00000501400 TROAPQ12815 778 aa21.22■□□□□ 0.99
LINC00535-201ENST00000501400 CMTR1Q8N1G2 835 aaKnown RBP21.22■□□□□ 0.99
LINC00535-201ENST00000501400 SSRP1Q08945 709 aaKnown RBP21.21■□□□□ 0.99
LINC00535-201ENST00000501400 KRT40Q6A162 431 aa21.21■□□□□ 0.99
LINC00535-201ENST00000501400 ATL3Q6DD88 541 aa21.21■□□□□ 0.99
LINC00535-201ENST00000501400 RCSD1Q6JBY9 416 aa21.21■□□□□ 0.99
LINC00535-201ENST00000501400 SLC44A5Q8NCS7 719 aa21.21■□□□□ 0.99
LINC00535-201ENST00000501400 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
LINC00535-201ENST00000501400 KIF13BQ9NQT8 1826 aa21.21■□□□□ 0.99
LINC00535-201ENST00000501400 CCDC196A0A1B0GTZ2 297 aa21.21■□□□□ 0.99
LINC00535-201ENST00000501400 F8W031 263 aaPredicted RBP21.21■□□□□ 0.99
LINC00535-201ENST00000501400 LIG1P18858 919 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms