RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 BTDP43251 543 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 RFX5P48382 616 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-209ENST00000498725 HMGCS2P54868 508 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 MDM2Q00987 491 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-209ENST00000498725 SPP2Q13103 211 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 FAM110CQ1W6H9 321 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 ATG9AQ7Z3C6 839 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 ANKLE1Q8NAG6 615 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 COL25A1Q9BXS0 654 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-209ENST00000498725 USP44Q9H0E7 712 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC171-209ENST00000498725 CEP126Q9P2H0 1117 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 PNMA3Q9UL41 463 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 DENND2AQ9ULE3 1009 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCDC171-209ENST00000498725 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
CCDC171-209ENST00000498725 TRIB2Q92519 343 aa11.36□□□□□ -0.59
CCDC171-209ENST00000498725 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
CCDC171-209ENST00000498725 CAPN2P17655 700 aa11.35□□□□□ -0.59
CCDC171-209ENST00000498725 LRIT3Q3SXY7 679 aa11.35□□□□□ -0.59
CCDC171-209ENST00000498725 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
CCDC171-209ENST00000498725 ASCC2Q9H1I8 757 aaPredicted RBP11.35□□□□□ -0.59
CCDC171-209ENST00000498725 GJD2Q9UKL4 321 aa11.35□□□□□ -0.59
CCDC171-209ENST00000498725 PA2G4Q9UQ80 394 aaKnown RBP11.35□□□□□ -0.59
CCDC171-209ENST00000498725 PFASO15067 1338 aa11.35□□□□□ -0.59
CCDC171-209ENST00000498725 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
CCDC171-209ENST00000498725 RFX7Q2KHR2 1363 aa11.34□□□□□ -0.59
CCDC171-209ENST00000498725 PRKAR2AP13861 404 aaKnown RBP11.34□□□□□ -0.59
CCDC171-209ENST00000498725 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
CCDC171-209ENST00000498725 CCDC102BQ68D86 513 aa11.34□□□□□ -0.59
CCDC171-209ENST00000498725 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC171-209ENST00000498725 FAM9BQ8IZU0 186 aa11.34□□□□□ -0.59
CCDC171-209ENST00000498725 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
CCDC171-209ENST00000498725 ZNF280CQ8ND82 737 aa11.34□□□□□ -0.59
CCDC171-209ENST00000498725 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
CCDC171-209ENST00000498725 MROH7-TTC4A0A0A0MT08 1334 aa11.34□□□□□ -0.59
CCDC171-209ENST00000498725 GAKO14976 1311 aa11.34□□□□□ -0.59
CCDC171-209ENST00000498725 A0A0C4DFX4 3053 aa11.33□□□□□ -0.6
CCDC171-209ENST00000498725 SIPA1L1O43166 1804 aa11.33□□□□□ -0.6
CCDC171-209ENST00000498725 TIMM10P62072 90 aa11.33□□□□□ -0.6
CCDC171-209ENST00000498725 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
CCDC171-209ENST00000498725 MAP3K10Q02779 954 aa11.33□□□□□ -0.6
CCDC171-209ENST00000498725 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC171-209ENST00000498725 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
CCDC171-209ENST00000498725 RRP1BQ14684 758 aaKnown RBP11.33□□□□□ -0.6
CCDC171-209ENST00000498725 LRRC26Q2I0M4 334 aa11.33□□□□□ -0.6
CCDC171-209ENST00000498725 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
CCDC171-209ENST00000498725 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
CCDC171-209ENST00000498725 OGDHLQ9ULD0 1010 aa11.33□□□□□ -0.6
CCDC171-209ENST00000498725 MAST2Q6P0Q8 1798 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 HAX1O00165 279 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 SEMA3EO15041 775 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 CCND3P30281 292 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-209ENST00000498725 MECOMQ03112 1051 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-209ENST00000498725 CCL14Q16627 93 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-209ENST00000498725 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 CCAR1Q8IX12 1150 aaKnown RBP11.32□□□□□ -0.6
CCDC171-209ENST00000498725 PAGR1Q9BTK6 254 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 OSBPL5Q9H0X9 879 aaPredicted RBP11.32□□□□□ -0.6
CCDC171-209ENST00000498725 CWC22Q9HCG8 908 aaKnown RBP11.32□□□□□ -0.6
CCDC171-209ENST00000498725 LAMA3Q16787 3333 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 PTPRCP08575 1304 aa11.32□□□□□ -0.6
CCDC171-209ENST00000498725 UBTFL1P0CB47 393 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-209ENST00000498725 ZKSCAN1P17029 563 aaPredicted RBP11.31□□□□□ -0.6
CCDC171-209ENST00000498725 CAP2P40123 477 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 RHBDL3P58872 404 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 MTMR2Q13614 643 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 PDE3AQ14432 1141 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 SSH1Q8WYL5 1049 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
CCDC171-209ENST00000498725 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
CCDC171-209ENST00000498725 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
CCDC171-209ENST00000498725 TBC1D12O60347 775 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 CIAO1O76071 339 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 IL15P40933 162 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-209ENST00000498725 ATN1P54259 1190 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-209ENST00000498725 SHROOM1Q2M3G4 852 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-209ENST00000498725 PI16Q6UXB8 463 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 TBC1D9Q6ZT07 1266 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 TEX11Q8IYF3 940 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 ZNF384Q8TF68 577 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 NEUROD6Q96NK8 337 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 LBHD1Q9BQE6 289 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-209ENST00000498725 SENP6Q9GZR1 1112 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-209ENST00000498725 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 MORF4L1Q9UBU8 362 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 UNC80Q8N2C7 3258 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 LTBP2Q14767 1821 aa11.3□□□□□ -0.6
CCDC171-209ENST00000498725 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 CNGA1P29973 690 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 HERVK_113P62684 666 aa11.29□□□□□ -0.6
CCDC171-209ENST00000498725 JAG1P78504 1218 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms