RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 TRIM6-TRIM34B2RNG4 842 aa19.37■□□□□ 0.69
LMNA-217ENST00000498722 RNF113AO15541 343 aaKnown RBP19.37■□□□□ 0.69
LMNA-217ENST00000498722 SEC24BO95487 1268 aa19.37■□□□□ 0.69
LMNA-217ENST00000498722 HSPA1AP0DMV8 641 aaKnown RBP19.37■□□□□ 0.69
LMNA-217ENST00000498722 HSPA1BP0DMV9 641 aaKnown RBP19.37■□□□□ 0.69
LMNA-217ENST00000498722 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.37■□□□□ 0.69
LMNA-217ENST00000498722 DHX36Q9H2U1 1008 aaKnown RBP19.37■□□□□ 0.69
LMNA-217ENST00000498722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.37■□□□□ 0.69
LMNA-217ENST00000498722 FAM196BA6NMK8 535 aa19.36■□□□□ 0.69
LMNA-217ENST00000498722 HLA-DOAP06340 250 aa19.36■□□□□ 0.69
LMNA-217ENST00000498722 ZFYP08048 801 aaPredicted RBP19.36■□□□□ 0.69
LMNA-217ENST00000498722 SDSP20132 328 aa19.36■□□□□ 0.69
LMNA-217ENST00000498722 INPP5BP32019 993 aa19.36■□□□□ 0.69
LMNA-217ENST00000498722 SPRYD7Q5W111 196 aa19.36■□□□□ 0.69
LMNA-217ENST00000498722 CRACR2BQ8N4Y2 399 aaPredicted RBP19.36■□□□□ 0.69
LMNA-217ENST00000498722 WNK4Q96J92 1243 aa19.36■□□□□ 0.69
LMNA-217ENST00000498722 SLURP2P0DP57 97 aa19.35■□□□□ 0.69
LMNA-217ENST00000498722 SDR42E1Q8WUS8 393 aa19.35■□□□□ 0.69
LMNA-217ENST00000498722 RILPL2Q969X0 211 aa19.35■□□□□ 0.69
LMNA-217ENST00000498722 EVI5LQ96CN4 794 aa19.35■□□□□ 0.69
LMNA-217ENST00000498722 OPTNQ96CV9 577 aa19.35■□□□□ 0.69
LMNA-217ENST00000498722 OTUD5Q96G74 571 aa19.35■□□□□ 0.69
LMNA-217ENST00000498722 PUS7LQ9H0K6 701 aaKnown RBP19.35■□□□□ 0.69
LMNA-217ENST00000498722 PI4KBQ9UBF8 816 aa19.35■□□□□ 0.69
LMNA-217ENST00000498722 POLR3DP05423 398 aaPredicted RBP19.34■□□□□ 0.69
LMNA-217ENST00000498722 MFAP1P55081 439 aaKnown RBP19.34■□□□□ 0.69
LMNA-217ENST00000498722 APPBP2Q92624 585 aa19.34■□□□□ 0.69
LMNA-217ENST00000498722 IPO9Q96P70 1041 aaKnown RBP19.34■□□□□ 0.69
LMNA-217ENST00000498722 SNCAIPQ9Y6H5 919 aa19.34■□□□□ 0.69
LMNA-217ENST00000498722 PHIPQ8WWQ0 1821 aa19.33■□□□□ 0.69
LMNA-217ENST00000498722 ZBTB48P10074 688 aaPredicted RBP19.33■□□□□ 0.69
LMNA-217ENST00000498722 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.69
LMNA-217ENST00000498722 WBP1LQ9NX94 342 aa19.33■□□□□ 0.69
LMNA-217ENST00000498722 MCM9Q9NXL9 1143 aa19.33■□□□□ 0.69
LMNA-217ENST00000498722 SLC4A4Q9Y6R1 1079 aa19.33■□□□□ 0.69
LMNA-217ENST00000498722 PTPRFP10586 1907 aa19.33■□□□□ 0.69
LMNA-217ENST00000498722 PRKAB2O43741 272 aa19.32■□□□□ 0.68
LMNA-217ENST00000498722 SREBF2Q12772 1141 aa19.32■□□□□ 0.68
LMNA-217ENST00000498722 OSBP2Q969R2 916 aa19.32■□□□□ 0.68
LMNA-217ENST00000498722 TBC1D32Q96NH3 1257 aa19.32■□□□□ 0.68
LMNA-217ENST00000498722 PICK1Q9NRD5 415 aa19.32■□□□□ 0.68
LMNA-217ENST00000498722 HERC5Q9UII4 1024 aaKnown RBP19.32■□□□□ 0.68
LMNA-217ENST00000498722 ZNF112Q9UJU3 913 aa19.32■□□□□ 0.68
LMNA-217ENST00000498722 TBC1D12O60347 775 aa19.31■□□□□ 0.68
LMNA-217ENST00000498722 GJA5P36382 358 aa19.31■□□□□ 0.68
LMNA-217ENST00000498722 TTC6Q86TZ1 520 aa19.31■□□□□ 0.68
LMNA-217ENST00000498722 ERO1BQ86YB8 467 aa19.31■□□□□ 0.68
LMNA-217ENST00000498722 REM2Q8IYK8 340 aaPredicted RBP19.31■□□□□ 0.68
LMNA-217ENST00000498722 DCP1AQ9NPI6 582 aaPredicted RBP19.31■□□□□ 0.68
LMNA-217ENST00000498722 MANSC4A6NHS7 340 aaPredicted RBP19.3■□□□□ 0.68
LMNA-217ENST00000498722 SPDYE5A6NIY4 337 aa19.3■□□□□ 0.68
LMNA-217ENST00000498722 PHF20L1A8MW92 1017 aa19.3■□□□□ 0.68
LMNA-217ENST00000498722 M0R2C6 588 aa19.3■□□□□ 0.68
LMNA-217ENST00000498722 FOXP4Q8IVH2 680 aaPredicted RBP19.3■□□□□ 0.68
LMNA-217ENST00000498722 AMOTL1Q8IY63 956 aa19.3■□□□□ 0.68
LMNA-217ENST00000498722 SCYL3Q8IZE3 742 aa19.3■□□□□ 0.68
LMNA-217ENST00000498722 C22orf23Q9BZE7 217 aa19.3■□□□□ 0.68
LMNA-217ENST00000498722 ATP8A2Q9NTI2 1148 aa19.3■□□□□ 0.68
LMNA-217ENST00000498722 CASP8AP2Q9UKL3 1982 aa19.3■□□□□ 0.68
LMNA-217ENST00000498722 FOXN1O15353 648 aa19.29■□□□□ 0.68
LMNA-217ENST00000498722 GPAA1O43292 621 aa19.29■□□□□ 0.68
LMNA-217ENST00000498722 CTNND1O60716 968 aaKnown RBP19.29■□□□□ 0.68
LMNA-217ENST00000498722 APPP05067 770 aa19.29■□□□□ 0.68
LMNA-217ENST00000498722 MAP3K10Q02779 954 aa19.29■□□□□ 0.68
LMNA-217ENST00000498722 NOL9Q5SY16 702 aaKnown RBP19.29■□□□□ 0.68
LMNA-217ENST00000498722 STRBPQ96SI9 672 aaKnown RBP19.29■□□□□ 0.68
LMNA-217ENST00000498722 SEC62Q99442 399 aaKnown RBP19.29■□□□□ 0.68
LMNA-217ENST00000498722 SERPINB13Q9UIV8 391 aa19.29■□□□□ 0.68
LMNA-217ENST00000498722 TSKSQ9UJT2 592 aa19.29■□□□□ 0.68
LMNA-217ENST00000498722 ZMYM1Q5SVZ6 1142 aa19.28■□□□□ 0.68
LMNA-217ENST00000498722 CA12O43570 354 aa19.27■□□□□ 0.68
LMNA-217ENST00000498722 TRPA1O75762 1119 aa19.27■□□□□ 0.68
LMNA-217ENST00000498722 PLCD1P51178 756 aa19.27■□□□□ 0.68
LMNA-217ENST00000498722 GTF2A2P52657 109 aa19.27■□□□□ 0.68
LMNA-217ENST00000498722 PPATQ06203 517 aa19.27■□□□□ 0.68
LMNA-217ENST00000498722 PPIL2Q13356 520 aa19.27■□□□□ 0.68
LMNA-217ENST00000498722 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.27■□□□□ 0.68
LMNA-217ENST00000498722 IRF6O14896 467 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 REC8O95072 547 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 GDF11O95390 407 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 CYP2D6P10635 497 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 GNAT2P19087 354 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 CTCFP49711 727 aaPredicted RBP19.26■□□□□ 0.67
LMNA-217ENST00000498722 EHD4Q9H223 541 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 DNAJC18Q9H819 358 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 RNF186Q9NXI6 227 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 ZHX2Q9Y6X8 837 aa19.26■□□□□ 0.67
LMNA-217ENST00000498722 CCL15-CCL14A0A0B4J2E2 113 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 USP17L12C9JPN9 530 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 USP17L21D6R901 530 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 PTPRAP18433 802 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 CAP2P40123 477 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 TM4SF4P48230 202 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 TDO2P48775 406 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
LMNA-217ENST00000498722 INHBEP58166 350 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 SNAPC2Q13487 334 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 CCL15Q16663 113 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 CCDC129Q6ZRS4 1044 aa19.25■□□□□ 0.67
LMNA-217ENST00000498722 CYP2D7A0A087X1C5 515 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms