RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 LRIT3Q3SXY7 679 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 C4orf48Q5BLP8 95 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 PPP1R42Q7Z4L9 355 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 AGBL3Q8NEM8 1001 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 PURBQ96QR8 312 aaKnown RBP7.28□□□□□ -1.24
SPTA1-209ENST00000498708 THUMPD2Q9BTF0 503 aaKnown RBP7.28□□□□□ -1.24
SPTA1-209ENST00000498708 UTP14AQ9BVJ6 771 aaKnown RBP7.28□□□□□ -1.24
SPTA1-209ENST00000498708 PSME4Q14997 1843 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 WNT10BO00744 389 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 TAF7Q15545 349 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-209ENST00000498708 KIF6Q6ZMV9 814 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 SH3BP5LQ7L8J4 393 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 SH3RF1Q7Z6J0 888 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 TRMT44Q8IYL2 757 aaKnown RBP7.27□□□□□ -1.25
SPTA1-209ENST00000498708 TBC1D16Q8TBP0 767 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 CELF1Q92879 486 aaKnown RBP7.27□□□□□ -1.25
SPTA1-209ENST00000498708 ZNF428Q96B54 188 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 ITPKCQ96DU7 683 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 FAM161BQ96MY7 647 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 MXD3Q9BW11 206 aa7.27□□□□□ -1.25
SPTA1-209ENST00000498708 H3BM21 787 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 NEFMP07197 916 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 GJB1P08034 283 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 CCL5P13501 91 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 SKIV2LQ15477 1246 aaKnown RBP7.26□□□□□ -1.25
SPTA1-209ENST00000498708 PARP10Q53GL7 1025 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 OTUD7BQ6GQQ9 843 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 VASH1Q7L8A9 365 aaPredicted RBP7.26□□□□□ -1.25
SPTA1-209ENST00000498708 DDRGK1Q96HY6 314 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 ZC3H12CQ9C0D7 883 aaKnown RBP7.26□□□□□ -1.25
SPTA1-209ENST00000498708 ZFAND3Q9H8U3 227 aa7.26□□□□□ -1.25
SPTA1-209ENST00000498708 SSC5DA1L4H1 1573 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 MAGEB6P1A0A0J9YX57 407 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 FAM181BA6NEQ2 426 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 SASH1O94885 1247 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 FARP2O94887 1054 aaPredicted RBP7.25□□□□□ -1.25
SPTA1-209ENST00000498708 ANXA1P04083 346 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 NR3C2P08235 984 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 EIF2S2P20042 333 aaKnown RBP7.25□□□□□ -1.25
SPTA1-209ENST00000498708 CTGFP29279 349 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 ARHGEF6Q15052 776 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 MAP3K11Q16584 847 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 TPRNQ4KMQ1 711 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 TMC4Q7Z404 712 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 EYA3Q99504 573 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 ZMYND8Q9ULU4 1186 aaPredicted RBP7.25□□□□□ -1.25
SPTA1-209ENST00000498708 IRS2Q9Y4H2 1338 aa7.25□□□□□ -1.25
SPTA1-209ENST00000498708 HTATSF1O43719 755 aaKnown RBP7.24□□□□□ -1.25
SPTA1-209ENST00000498708 MAN1A2O60476 641 aa7.24□□□□□ -1.25
SPTA1-209ENST00000498708 FSHRP23945 695 aa7.24□□□□□ -1.25
SPTA1-209ENST00000498708 EIF4A1P60842 406 aaKnown RBP7.24□□□□□ -1.25
SPTA1-209ENST00000498708 CTDSPL2Q05D32 466 aa7.24□□□□□ -1.25
SPTA1-209ENST00000498708 TAF1CQ15572 869 aaPredicted RBP7.24□□□□□ -1.25
SPTA1-209ENST00000498708 SH3D19Q5HYK7 790 aa7.24□□□□□ -1.25
SPTA1-209ENST00000498708 TDHQ8IZJ6 230 aa7.24□□□□□ -1.25
SPTA1-209ENST00000498708 U2AF1L4Q8WU68 220 aaKnown RBP7.24□□□□□ -1.25
SPTA1-209ENST00000498708 RNF208Q9H0X6 261 aa7.24□□□□□ -1.25
SPTA1-209ENST00000498708 ZFYVE28Q9HCC9 887 aa7.24□□□□□ -1.25
SPTA1-209ENST00000498708 TMEM265A0A087WTH1 108 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 USP17L3A6NCW0 530 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 USP17L4A6NCW7 530 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 USP2O75604 605 aaPredicted RBP7.23□□□□□ -1.25
SPTA1-209ENST00000498708 BMP2P12643 396 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 SYN1P17600 705 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 GMPRP36959 345 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 MAGEA10P43363 369 aaPredicted RBP7.23□□□□□ -1.25
SPTA1-209ENST00000498708 LACTBP83111 547 aaPredicted RBP7.23□□□□□ -1.25
SPTA1-209ENST00000498708 MAP3K12Q12852 859 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 PDXDC2PQ6P474 469 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 USP17L1Q7RTZ2 530 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 NLRP10Q86W26 655 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 C7orf61Q8IZ16 206 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 FAM43AQ8N2R8 423 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 MEIOBQ8N635 442 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 PNISRQ8TF01 805 aaKnown RBP7.23□□□□□ -1.25
SPTA1-209ENST00000498708 BRI3BPQ8WY22 251 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 KDM4CQ9H3R0 1056 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 CDV3Q9UKY7 258 aaKnown RBP7.23□□□□□ -1.25
SPTA1-209ENST00000498708 MAPK8IP3Q9UPT6 1336 aa7.23□□□□□ -1.25
SPTA1-209ENST00000498708 UFL1O94874 794 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 SGPL1O95470 568 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 GRK4P32298 578 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 AIMP1Q12904 312 aaKnown RBP7.22□□□□□ -1.25
SPTA1-209ENST00000498708 NFE2L2Q16236 605 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 C6orf118Q5T5N4 469 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 APOBEC3FQ8IUX4 373 aaKnown RBP7.22□□□□□ -1.25
SPTA1-209ENST00000498708 CCDC116Q8IYX3 515 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 MAFAQ8NHW3 353 aaPredicted RBP7.22□□□□□ -1.25
SPTA1-209ENST00000498708 OPTNQ96CV9 577 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 PAWRQ96IZ0 340 aaKnown RBP7.22□□□□□ -1.25
SPTA1-209ENST00000498708 TSEN34Q9BSV6 310 aaKnown RBP7.22□□□□□ -1.25
SPTA1-209ENST00000498708 DEFB129Q9H1M3 183 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 TRMT112Q9UI30 125 aaKnown RBP7.22□□□□□ -1.25
SPTA1-209ENST00000498708 FKBPLQ9UIM3 349 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 TSPYL4Q9UJ04 414 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 RIPOR2Q9Y4F9 1068 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 OTOFQ9HC10 1997 aa7.22□□□□□ -1.25
SPTA1-209ENST00000498708 CCL15-CCL14A0A0B4J2E2 113 aa7.21□□□□□ -1.26
SPTA1-209ENST00000498708 PPP1R12BO60237 982 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms