RNA–Protein interactions for RNA: ENST00000498623.6

ARPC4-208, Transcript of actin related protein 2/3 complex subunit 4, human

TSL 2 BASIC

Gene ARPC4, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARPC4-208	ENST00000498623	TGFBRAP1	Q8WUH2	860 aa		27.85	■■■□□ 2.05
ARPC4-208	ENST00000498623		A0A0G2JLL6	359 aa	Predicted RBP	27.84	■■■□□ 2.05
ARPC4-208	ENST00000498623	PRRT2	Q7Z6L0	340 aa	Predicted RBP	27.84	■■■□□ 2.05
ARPC4-208	ENST00000498623	MAGEB6	Q8N7X4	407 aa		27.84	■■■□□ 2.05
ARPC4-208	ENST00000498623	FAM196B	A6NMK8	535 aa		27.83	■■■□□ 2.05
ARPC4-208	ENST00000498623	PDHX	O00330	501 aa		27.83	■■■□□ 2.05
ARPC4-208	ENST00000498623	METTL16	Q86W50	562 aa	Known RBP	27.83	■■■□□ 2.05
ARPC4-208	ENST00000498623	MAPKAPK5	Q8IW41	473 aa		27.83	■■■□□ 2.05
ARPC4-208	ENST00000498623	EFCC1	Q9HA90	598 aa		27.83	■■■□□ 2.05
ARPC4-208	ENST00000498623	ADGRA2	Q96PE1	1338 aa		27.83	■■■□□ 2.05
ARPC4-208	ENST00000498623	LOC285556	D6RIA3	1793 aa		27.82	■■■□□ 2.04
ARPC4-208	ENST00000498623	DYNLL1	P63167	89 aa	Known RBP	27.82	■■■□□ 2.04
ARPC4-208	ENST00000498623	CAP1	Q01518	475 aa		27.82	■■■□□ 2.04
ARPC4-208	ENST00000498623	ARHGEF6	Q15052	776 aa		27.82	■■■□□ 2.04
ARPC4-208	ENST00000498623	FASTKD5	Q7L8L6	764 aa	Known RBP	27.82	■■■□□ 2.04
ARPC4-208	ENST00000498623	DDX60L	Q5H9U9	1706 aa	Known RBP	27.81	■■■□□ 2.04
ARPC4-208	ENST00000498623	GPAT2	Q6NUI2	795 aa		27.81	■■■□□ 2.04
ARPC4-208	ENST00000498623	C17orf99	Q6UX52	265 aa		27.81	■■■□□ 2.04
ARPC4-208	ENST00000498623	TBC1D2	Q9BYX2	928 aa		27.81	■■■□□ 2.04
ARPC4-208	ENST00000498623	PTPN22	Q9Y2R2	807 aa		27.81	■■■□□ 2.04
ARPC4-208	ENST00000498623	ZSWIM8	A7E2V4	1837 aa		27.81	■■■□□ 2.04
ARPC4-208	ENST00000498623	MYH7	P12883	1935 aa		27.8	■■■□□ 2.04
ARPC4-208	ENST00000498623	HTT	P42858	3142 aa		27.8	■■■□□ 2.04
ARPC4-208	ENST00000498623	CAP2	P40123	477 aa		27.8	■■■□□ 2.04
ARPC4-208	ENST00000498623	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.8	■■■□□ 2.04
ARPC4-208	ENST00000498623	MIGA1	Q8NAN2	632 aa		27.8	■■■□□ 2.04
ARPC4-208	ENST00000498623	LRRCC1	Q9C099	1032 aa		27.8	■■■□□ 2.04
ARPC4-208	ENST00000498623	SLC45A1	Q9Y2W3	748 aa		27.8	■■■□□ 2.04
ARPC4-208	ENST00000498623	MLLT1	Q03111	559 aa	Predicted RBP	27.79	■■■□□ 2.04
ARPC4-208	ENST00000498623	PARK7	Q99497	189 aa	Known RBP	27.79	■■■□□ 2.04
ARPC4-208	ENST00000498623	ATP5J	P18859	108 aa		27.78	■■■□□ 2.04
ARPC4-208	ENST00000498623	LACTB	P83111	547 aa	Predicted RBP	27.78	■■■□□ 2.04
ARPC4-208	ENST00000498623	RRP1B	Q14684	758 aa	Known RBP	27.78	■■■□□ 2.04
ARPC4-208	ENST00000498623	DNAJC18	Q9H819	358 aa		27.78	■■■□□ 2.04
ARPC4-208	ENST00000498623	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	27.78	■■■□□ 2.04
ARPC4-208	ENST00000498623	PALD1	Q9ULE6	856 aa		27.78	■■■□□ 2.04
ARPC4-208	ENST00000498623	NAV1	Q8NEY1	1877 aa		27.78	■■■□□ 2.04
ARPC4-208	ENST00000498623	RBBP6	Q7Z6E9	1792 aa	Known RBP	27.78	■■■□□ 2.04
ARPC4-208	ENST00000498623	GOLIM4	O00461	696 aa		27.77	■■■□□ 2.04
ARPC4-208	ENST00000498623	SOX10	P56693	466 aa		27.77	■■■□□ 2.04
ARPC4-208	ENST00000498623	RIOK1	Q9BRS2	568 aa	Known RBP	27.77	■■■□□ 2.04
ARPC4-208	ENST00000498623	TRIM75P	A6NK02	468 aa		27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	GNRH1	P01148	92 aa		27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	HLA-DOA	P06340	250 aa		27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	PDE6A	P16499	860 aa		27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	SLC9C2	Q5TAH2	1124 aa		27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	DNAJC2	Q99543	621 aa	Known RBP	27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	DCTPP1	Q9H773	170 aa		27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	GINM1	Q9NU53	330 aa		27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	MGAM	O43451	1857 aa		27.76	■■■□□ 2.03
ARPC4-208	ENST00000498623	RRP1	P56182	461 aa	Known RBP	27.75	■■■□□ 2.03
ARPC4-208	ENST00000498623	KIF22	Q14807	665 aa		27.75	■■■□□ 2.03
ARPC4-208	ENST00000498623	CCDC84	Q86UT8	332 aa	Predicted RBP	27.75	■■■□□ 2.03
ARPC4-208	ENST00000498623	ZNF280C	Q8ND82	737 aa		27.75	■■■□□ 2.03
ARPC4-208	ENST00000498623	USP17L5	A8MUK1	530 aa		27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	USP5	P45974	858 aa		27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	GADL1	Q6ZQY3	521 aa		27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	PROCA1	Q8NCQ7	364 aa	Predicted RBP	27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	HAUS7	Q99871	368 aa		27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	PAG1	Q9NWQ8	432 aa		27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	SAP30BP	Q9UHR5	308 aa	Known RBP	27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	CPA4	Q9UI42	421 aa		27.74	■■■□□ 2.03
ARPC4-208	ENST00000498623	MAGEB6P1	A0A0J9YX57	407 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	TCRBV5S4A2T	A0A5A2	114 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	ASNS	P08243	561 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	ARMC5	Q96C12	935 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	TRIM34	Q9BYJ4	488 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	EHD4	Q9H223	541 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	BOLA2	Q9H3K6	86 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	AS3MT	Q9HBK9	375 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	AGTPBP1	Q9UPW5	1226 aa		27.73	■■■□□ 2.03
ARPC4-208	ENST00000498623	ZNF532	Q9HCE3	1301 aa		27.72	■■■□□ 2.03
ARPC4-208	ENST00000498623	CYP2C8	P10632	490 aa		27.72	■■■□□ 2.03
ARPC4-208	ENST00000498623	BCR	P11274	1271 aa		27.72	■■■□□ 2.03
ARPC4-208	ENST00000498623	SPP2	Q13103	211 aa		27.72	■■■□□ 2.03
ARPC4-208	ENST00000498623	WDR18	Q9BV38	432 aa		27.72	■■■□□ 2.03
ARPC4-208	ENST00000498623	ARHGAP39	Q9C0H5	1083 aa		27.72	■■■□□ 2.03
ARPC4-208	ENST00000498623	PRMT2	P55345	433 aa		27.71	■■■□□ 2.03
ARPC4-208	ENST00000498623	SH3D19	Q5HYK7	790 aa		27.71	■■■□□ 2.03
ARPC4-208	ENST00000498623	EDC3	Q96F86	508 aa	Known RBP	27.71	■■■□□ 2.03
ARPC4-208	ENST00000498623	BCL11A	Q9H165	835 aa		27.71	■■■□□ 2.03
ARPC4-208	ENST00000498623	SMARCA5	O60264	1052 aa	Predicted RBP	27.7	■■■□□ 2.02
ARPC4-208	ENST00000498623	TTC6	Q86TZ1	520 aa		27.7	■■■□□ 2.02
ARPC4-208	ENST00000498623	ADD2	P35612	726 aa		27.69	■■■□□ 2.02
ARPC4-208	ENST00000498623	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.69	■■■□□ 2.02
ARPC4-208	ENST00000498623	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	27.69	■■■□□ 2.02	5e-9	■■■□□ 18.3
ARPC4-208	ENST00000498623	SERPINB13	Q9UIV8	391 aa		27.69	■■■□□ 2.02
ARPC4-208	ENST00000498623	ZBTB21	Q9ULJ3	1066 aa		27.69	■■■□□ 2.02
ARPC4-208	ENST00000498623	PTCH2	Q9Y6C5	1203 aa		27.69	■■■□□ 2.02
ARPC4-208	ENST00000498623	CTGF	P29279	349 aa		27.68	■■■□□ 2.02
ARPC4-208	ENST00000498623	JAG1	P78504	1218 aa		27.68	■■■□□ 2.02
ARPC4-208	ENST00000498623	TREML2	Q5T2D2	321 aa		27.68	■■■□□ 2.02
ARPC4-208	ENST00000498623	TATDN1	Q6P1N9	297 aa		27.68	■■■□□ 2.02
ARPC4-208	ENST00000498623	ECHDC1	Q9NTX5	307 aa		27.68	■■■□□ 2.02
ARPC4-208	ENST00000498623	PNMA3	Q9UL41	463 aa		27.68	■■■□□ 2.02
ARPC4-208	ENST00000498623	PCDHB15	Q9Y5E8	787 aa		27.68	■■■□□ 2.02
ARPC4-208	ENST00000498623	KIAA0100	Q14667	2235 aa	Known RBP	27.67	■■■□□ 2.02
ARPC4-208	ENST00000498623	HMGCS2	P54868	508 aa		27.67	■■■□□ 2.02
ARPC4-208	ENST00000498623	TRIM47	Q96LD4	638 aa		27.67	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms