RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 DBNLQ9UJU6 430 aaKnown RBP17.69■□□□□ 0.42
HDLBP-247ENST00000498595 PNMA3Q9UL41 463 aa17.69■□□□□ 0.42
HDLBP-247ENST00000498595 TNRC18O15417 2968 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-247ENST00000498595 ADGRA2Q96PE1 1338 aa17.69■□□□□ 0.42
HDLBP-247ENST00000498595 FAM196BA6NMK8 535 aa17.68■□□□□ 0.42
HDLBP-247ENST00000498595 IDH1O75874 414 aaKnown RBP17.68■□□□□ 0.42
HDLBP-247ENST00000498595 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
HDLBP-247ENST00000498595 PPP4CP60510 307 aa17.68■□□□□ 0.42
HDLBP-247ENST00000498595 PABPC4Q13310 644 aaKnown RBP eCLIP17.68■□□□□ 0.42
HDLBP-247ENST00000498595 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
HDLBP-247ENST00000498595 TGFBRAP1Q8WUH2 860 aa17.68■□□□□ 0.42
HDLBP-247ENST00000498595 TRIM47Q96LD4 638 aa17.68■□□□□ 0.42
HDLBP-247ENST00000498595 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
HDLBP-247ENST00000498595 HMMRO75330 724 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 HLA-DOAP06340 250 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 SLURP2P0DP57 97 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 EN2P19622 333 aaPredicted RBP17.67■□□□□ 0.42
HDLBP-247ENST00000498595 OSBPP22059 807 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 CYP7A1P22680 504 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 CAP2P40123 477 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 AACSQ86V21 672 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 ZNF280CQ8ND82 737 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 EAF2Q96CJ1 260 aaPredicted RBP17.67■□□□□ 0.42
HDLBP-247ENST00000498595 BIN2Q9UBW5 565 aaPredicted RBP17.67■□□□□ 0.42
HDLBP-247ENST00000498595 AGTPBP1Q9UPW5 1226 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 EXOC6BQ9Y2D4 811 aa17.67■□□□□ 0.42
HDLBP-247ENST00000498595 USP17L5A8MUK1 530 aa17.66■□□□□ 0.42
HDLBP-247ENST00000498595 BCRP11274 1271 aa17.66■□□□□ 0.42
HDLBP-247ENST00000498595 MAP3K12Q12852 859 aa17.66■□□□□ 0.42
HDLBP-247ENST00000498595 SPP2Q13103 211 aa17.66■□□□□ 0.42
HDLBP-247ENST00000498595 MAPKAPK5Q8IW41 473 aa17.66■□□□□ 0.42
HDLBP-247ENST00000498595 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
HDLBP-247ENST00000498595 PIH1D3Q9NQM4 214 aaKnown RBP17.66■□□□□ 0.42
HDLBP-247ENST00000498595 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
HDLBP-247ENST00000498595 GRK4P32298 578 aa17.65■□□□□ 0.42
HDLBP-247ENST00000498595 TMED8Q6PL24 325 aaPredicted RBP17.65■□□□□ 0.42
HDLBP-247ENST00000498595 CCDC84Q86UT8 332 aaPredicted RBP17.65■□□□□ 0.42
HDLBP-247ENST00000498595 FOXP4Q8IVH2 680 aaPredicted RBP17.65■□□□□ 0.42
HDLBP-247ENST00000498595 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.65■□□□□ 0.42
HDLBP-247ENST00000498595 DDX19BQ9UMR2 479 aa17.65■□□□□ 0.42
HDLBP-247ENST00000498595 MAST2Q6P0Q8 1798 aa17.65■□□□□ 0.42
HDLBP-247ENST00000498595 FLT1P17948 1338 aa17.65■□□□□ 0.42
HDLBP-247ENST00000498595 DOCK1Q14185 1865 aa17.65■□□□□ 0.42
HDLBP-247ENST00000498595 ASNSP08243 561 aa17.64■□□□□ 0.41
HDLBP-247ENST00000498595 USP5P45974 858 aa17.64■□□□□ 0.41
HDLBP-247ENST00000498595 UBXN2AP68543 259 aa17.64■□□□□ 0.41
HDLBP-247ENST00000498595 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
HDLBP-247ENST00000498595 CLASRPQ8N2M8 674 aaKnown RBP17.64■□□□□ 0.41
HDLBP-247ENST00000498595 GINM1Q9NU53 330 aa17.64■□□□□ 0.41
HDLBP-247ENST00000498595 HTTP42858 3142 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 TNPO2O14787 897 aaKnown RBP17.63■□□□□ 0.41
HDLBP-247ENST00000498595 CTGFP29279 349 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 HMGCS2P54868 508 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 TTF1Q15361 905 aaPredicted RBP17.63■□□□□ 0.41
HDLBP-247ENST00000498595 ADGRA1Q86SQ6 560 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 SLAIN1Q8ND83 568 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 RHPN1Q8TCX5 695 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 GCC1Q96CN9 775 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 TMOD4Q9NZQ9 345 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 SAP30BPQ9UHR5 308 aaKnown RBP17.63■□□□□ 0.41
HDLBP-247ENST00000498595 PALD1Q9ULE6 856 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 PDE4DIPQ5VU43 2346 aa17.63■□□□□ 0.41
HDLBP-247ENST00000498595 APBB1O00213 710 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 SLC34A2O95436 690 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 IFIT2P09913 472 aaKnown RBP17.62■□□□□ 0.41
HDLBP-247ENST00000498595 GCLCP48506 637 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-247ENST00000498595 PRKCZQ05513 592 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 TREML2Q5T2D2 321 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 MIGA1Q8NAN2 632 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 COA7Q96BR5 231 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 KIF1BPQ96EK5 621 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 IL1RAPL2Q9NP60 686 aa17.62■□□□□ 0.41
HDLBP-247ENST00000498595 DYNLL1P63167 89 aaKnown RBP17.61■□□□□ 0.41
HDLBP-247ENST00000498595 ANKRD13CQ8N6S4 541 aa17.61■□□□□ 0.41
HDLBP-247ENST00000498595 WDR18Q9BV38 432 aa17.61■□□□□ 0.41
HDLBP-247ENST00000498595 BCL11AQ9H165 835 aa17.61■□□□□ 0.41
HDLBP-247ENST00000498595 RCAN3Q9UKA8 241 aa17.61■□□□□ 0.41
HDLBP-247ENST00000498595 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
HDLBP-247ENST00000498595 RBBP6Q7Z6E9 1792 aaKnown RBP17.61■□□□□ 0.41
HDLBP-247ENST00000498595 IRX3P78415 501 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-247ENST00000498595 FAM110CQ1W6H9 321 aa17.6■□□□□ 0.41
HDLBP-247ENST00000498595 ADCY3O60266 1144 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 RAB11FIP3O75154 756 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 FLT3LGP49771 235 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 BACE1P56817 501 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 MTMR2Q13614 643 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 SH3D19Q5HYK7 790 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 TTC6Q86TZ1 520 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 METTL16Q86W50 562 aaKnown RBP17.59■□□□□ 0.41
HDLBP-247ENST00000498595 RNF208Q9H0X6 261 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 ZBTB40Q9NUA8 1239 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 TAOK2Q9UL54 1235 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
HDLBP-247ENST00000498595 ZSWIM8A7E2V4 1837 aa17.58■□□□□ 0.41
HDLBP-247ENST00000498595 C19orf81C9J6K1 198 aa17.58■□□□□ 0.4
HDLBP-247ENST00000498595 USP17L10C9JJH3 530 aa17.58■□□□□ 0.4
HDLBP-247ENST00000498595 GDF11O95390 407 aa17.58■□□□□ 0.4
HDLBP-247ENST00000498595 CCL5P13501 91 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms